# STOCKHOLM 1.0
#=GF ID 2.60.40.150/FF/000260
#=GF DE Nicotinic receptor-associated protein 1
#=GF AC 2.60.40.150/FF/000260
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 63.882
#=GS Q9XUB9/6-168       AC Q9XUB9
#=GS Q9XUB9/6-168       OS Caenorhabditis elegans
#=GS Q9XUB9/6-168       DE Nicotinic receptor-associated protein 1
#=GS Q9XUB9/6-168       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q9XUB9/6-168       DR GO; GO:0005886; GO:0097120; 
#=GS Q22422/10-169      AC Q22422
#=GS Q22422/10-169      OS Caenorhabditis elegans
#=GS Q22422/10-169      DE Gon-2 Extragenic Modifier
#=GS Q22422/10-169      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A2F8P2/35-163      AC A2F8P2
#=GS A2F8P2/35-163      OS Trichomonas vaginalis
#=GS A2F8P2/35-163      DE Copine family protein
#=GS A2F8P2/35-163      DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A0A1I7T0B3/6-170   AC A0A1I7T0B3
#=GS A0A1I7T0B3/6-170   OS Caenorhabditis tropicalis
#=GS A0A1I7T0B3/6-170   DE Uncharacterized protein
#=GS A0A1I7T0B3/6-170   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS E3MJZ1/10-170      AC E3MJZ1
#=GS E3MJZ1/10-170      OS Caenorhabditis remanei
#=GS E3MJZ1/10-170      DE CRE-NRA-1 protein
#=GS E3MJZ1/10-170      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS G0MRC9/4-170       AC G0MRC9
#=GS G0MRC9/4-170       OS Caenorhabditis brenneri
#=GS G0MRC9/4-170       DE CBN-NRA-1 protein
#=GS G0MRC9/4-170       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS A8WMY4/7-171       AC A8WMY4
#=GS A8WMY4/7-171       OS Caenorhabditis briggsae
#=GS A8WMY4/7-171       DE Nicotinic receptor-associated protein 1
#=GS A8WMY4/7-171       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5TVJ9/55-220  AC A0A2G5TVJ9
#=GS A0A2G5TVJ9/55-220  OS Caenorhabditis nigoni
#=GS A0A2G5TVJ9/55-220  DE Uncharacterized protein
#=GS A0A2G5TVJ9/55-220  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A261A2X2/9-169   AC A0A261A2X2
#=GS A0A261A2X2/9-169   OS Caenorhabditis latens
#=GS A0A261A2X2/9-169   DE Uncharacterized protein
#=GS A0A261A2X2/9-169   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A2G5TVH2/68-233  AC A0A2G5TVH2
#=GS A0A2G5TVH2/68-233  OS Caenorhabditis nigoni
#=GS A0A2G5TVH2/68-233  DE Uncharacterized protein
#=GS A0A2G5TVH2/68-233  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8X0Y2/9-169       AC A8X0Y2
#=GS A8X0Y2/9-169       OS Caenorhabditis briggsae
#=GS A8X0Y2/9-169       DE Protein CBR-GEM-4
#=GS A8X0Y2/9-169       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5U449/9-169   AC A0A2G5U449
#=GS A0A2G5U449/9-169   OS Caenorhabditis nigoni
#=GS A0A2G5U449/9-169   DE Uncharacterized protein
#=GS A0A2G5U449/9-169   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GF SQ 12
Q9XUB9/6-168               ----GIADSSRPKTNVRLTISANNLMDLDVFSKSDPICLIYEKTSGRKATTTEEITVPTWKDKQWTERGRTEVVMNNLNPQFTKTFLLPYFFEETQLLRFEIYDADSPTVGQDLSSHDFLGRFECVLAQIVSYSTLKAHLGKTGQIGAQWRNKDKNTKTGSITIYAE
Q22422/10-169              -------TDSRPKTNVRLTISASNLMDLDVFSKSDPICIIYEKTSGRKATTTDPIAVVTWQDRQWTERGRTEIIWNDLNPQFKTTFLIPYFFEETQLFRFELYDVDSPKVGADMSGHDFLGRFECVLAQIVSYSTLRAHLGGKHSIGAQWKNKDKVSKNGSITIRAE
A2F8P2/35-163              ---------ESPI--VDIHLSAKNLPKLDIGSQSDPLCVVFIPING-----------------QWVEAARTEVIWDNPNPSWVKIIKTYYIFETNQPLRFCVYDADSEK--ADLSKHDFVGQCETTVQQIVS--------NFGHDITLDLHDSHHNSKRGQLVITGE
A0A1I7T0B3/6-170           --SLGITDSSRPKTNVRLTISANNLMDLDVFSKSDPICLIYEKTSGKKATTTEGITIPTWKDSQWTERGRTEVIMNNLNPQFTKTFLLPYFFEETQLLRFEIYDADSPSVGQDLSPHDFLGRFECVLAQIVSYSTLKAHLGKSDGIGTQWRNKDKNTKTGSITIYAE
E3MJZ1/10-170              ------VDSSRPKTNVRLTISANHLQDLDVFSKSDPICLIYEKTSGKKSTTTESIELATWQDAQWTERGRTEVVMNNLNPQFQKTFLLPYFFEETQLLRFEIYDADSPNVGQDLSSHDFLGRFECVLAQIVSYSTLKAHLGKHGEIGAQWRNKDKNTKTGSITIRAE
G0MRC9/4-170               STSIGIADSSRPKTNVRLTISANNLMDLDVFSKSDPICLIYEKTSGKKSTTTEEITVPTWQDKQWTERGRSEVVMNNLNPQFTKTFLLPYFFEETQLLRFEIYDADSPNVGQDLSAHDFLGRFECVLAQIVSYSTLKAHLGKKGEIGSQWRNKDKNTKTGSITIRAE
A8WMY4/7-171               --AIGISDSTRPKTNVRLTISAEHLMDTDVFSKSDPICLVYEKTSGKKATTTEPVQVPTWQDSQWTERGRTEVVMNNLNPQFTKTFLLPYFFEETQLLRFEIYDADSPNVGQDLSPHDFLGRFECVLAQIVSYSTLKAHLGKAEGIGAQWRNKDKNTRTGSITIRAE
A0A2G5TVJ9/55-220          -AAIGISDSTRPKTNVRLTISAEHLMDTDVFSKSDPICLVYEKTSGKKATTTEPVQVPTWQDSQWTERGRTEVVMNNLNPQFTKTFLLPYFFEETQLLRFEIYDADSPNVGQDLSPHDFLGRFECVLAQIVSYSTLKAHLGKAEGIGAQWRNKDKNTKTGSITIRAE
A0A261A2X2/9-169           ------LNETRPKTNVRLTISANNLMDLDVFSVSDPICIIYEKTSGRKSTTTDPITLPTWRDRQWTERGRTEIVWNNLNPQFKTTFLLPYFFEETQLLRFELYDVDSKVVGTDLSAHDFLGRFECVLAQIVSYSTFRAHLGDKEQIGSQVKPKDKNSKNGTITIRAE
A0A2G5TVH2/68-233          -AAIGISDSTRPKTNVRLTISAEHLMDTDVFSKSDPICLVYEKTSGKKATTTEPVQVPTWQDSQWTERGRTEVVMNNLNPQFTKTFLLPYFFEETQLLRFEIYDADSPNVGQDLSPHDFLGRFECVLAQIVSYSTLKAHLGKAEGIGAQWRNKDKNTKTGSITIRAE
A8X0Y2/9-169               ------LNESRPKTNVRLTISANNLMDLDVFSVSDPICIIYEKTSGRKATTTDSITLPTWRDRQWTERGRTEIVWNDLNPQFKTTFLLPYFFEETQLLRFELYDVDSKIVGTDLTAHDFLGRFECVLAQIVSYSTFRAHLGGQEQIGCQVKPKDKNSKNGTITIRAE
A0A2G5U449/9-169           ------LNESRPKTNVRLTISANNLMDLDVFSVSDPICIIYEKTSGRKATTTDPITLPTWRDRQWTERGRTEIVWNDLNPQFKTTFLLPYFFEETQLLRFELYDVDSKIVGTDLTAHDFLGRFECVLAQIVSYSTFRAHLGRQEQIGSQVKPKDKNSKNGTITIRAE
#=GC scorecons             00001113346955596767994695669759499979577566694535554242345535299696698977477699663566555969966968995599699435549873999797696676999955544555633449636454666758494769469
#=GC scorecons_70          __________**___*******_**_****_*_*****_**__***_________________***********_*******__**___***********__*****_____***_****************________*____**_*___****_*_*_***_**
#=GC scorecons_80          ___________*___*____**__*___**_*_***_*__*____*_________________**_*__****_____**_________*_**__*_***__**_**_____***_***_*__*____****_____________*_________*_*_*___*__*
#=GC scorecons_90          ___________*___*____**__*___*__*_***_*_______*_________________**_*__***______**_________*_**__*_***__**_**_____**__***_*__*____****_____________*___________*_*___*__*
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