# STOCKHOLM 1.0
#=GF ID 2.60.40.1290/FF/000001
#=GF DE Clumping factor A
#=GF AC 2.60.40.1290/FF/000001
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 24.241
#=GS 2vr3B02/154-311     AC Q2G015
#=GS 2vr3B02/154-311     OS Staphylococcus aureus subsp. aureus NCTC 8325
#=GS 2vr3B02/154-311     DE Clumping factor A
#=GS 2vr3B02/154-311     DR CATH; 2vr3; B:370-527; 
#=GS 2vr3B02/154-311     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 2vr3B02/154-311     DR GO; GO:0001968; GO:0070051; GO:0098630; 
#=GS 5jq6A02/154-329     AC Q53653
#=GS 5jq6A02/154-329     OS Staphylococcus aureus subsp. aureus str. Newman
#=GS 5jq6A02/154-329     DE Clumping factor A
#=GS 5jq6A02/154-329     DR CATH; 5jq6; A:370-541; 
#=GS 5jq6A02/154-329     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 5jq6A02/154-329     DR GO; GO:0009405; 
#=GS 2vr3A02/154-311     AC Q2G015
#=GS 2vr3A02/154-311     OS Staphylococcus aureus subsp. aureus NCTC 8325
#=GS 2vr3A02/154-311     DE Clumping factor A
#=GS 2vr3A02/154-311     DR CATH; 2vr3; A:370-527; 
#=GS 2vr3A02/154-311     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 2vr3A02/154-311     DR GO; GO:0001968; GO:0070051; GO:0098630; 
#=GS Q2G015/370-527      AC Q2G015
#=GS Q2G015/370-527      OS Staphylococcus aureus subsp. aureus NCTC 8325
#=GS Q2G015/370-527      DE Clumping factor A
#=GS Q2G015/370-527      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS Q2G015/370-527      DR GO; GO:0001968; GO:0070051; GO:0098630; 
#=GS 1n67A02/169-359     AC Q53653
#=GS 1n67A02/169-359     OS Staphylococcus aureus subsp. aureus str. Newman
#=GS 1n67A02/169-359     DE Clumping factor A
#=GS 1n67A02/169-359     DR CATH; 1n67; A:370-560; 
#=GS 1n67A02/169-359     DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS 1n67A02/169-359     DR GO; GO:0009405; 
#=GS A0A2C9TNP5/370-527  AC A0A2C9TNP5
#=GS A0A2C9TNP5/370-527  OS Staphylococcus aureus
#=GS A0A2C9TNP5/370-527  DE Clumping factor A
#=GS A0A2C9TNP5/370-527  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS Q53653/370-527      AC Q53653
#=GS Q53653/370-527      OS Staphylococcus aureus subsp. aureus str. Newman
#=GS Q53653/370-527      DE Clumping factor A
#=GS Q53653/370-527      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS Q53653/370-527      DR GO; GO:0009405; 
#=GS Q6GIK4/370-527      AC Q6GIK4
#=GS Q6GIK4/370-527      OS Staphylococcus aureus subsp. aureus MRSA252
#=GS Q6GIK4/370-527      DE Clumping factor A
#=GS Q6GIK4/370-527      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS Q6GB45/369-526      AC Q6GB45
#=GS Q6GB45/369-526      OS Staphylococcus aureus subsp. aureus MSSA476
#=GS Q6GB45/369-526      DE Clumping factor A
#=GS Q6GB45/369-526      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS Q5HHM8/370-527      AC Q5HHM8
#=GS Q5HHM8/370-527      OS Staphylococcus aureus subsp. aureus COL
#=GS Q5HHM8/370-527      DE Clumping factor A
#=GS Q5HHM8/370-527      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0H2XG16/370-527  AC A0A0H2XG16
#=GS A0A0H2XG16/370-527  OS Staphylococcus aureus subsp. aureus USA300
#=GS A0A0H2XG16/370-527  DE Clumping factor A
#=GS A0A0H2XG16/370-527  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS Q8NXJ1/369-526      AC Q8NXJ1
#=GS Q8NXJ1/369-526      OS Staphylococcus aureus subsp. aureus MW2
#=GS Q8NXJ1/369-526      DE Clumping factor A
#=GS Q8NXJ1/369-526      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS G0YZL7/232-386      AC G0YZL7
#=GS G0YZL7/232-386      OS Staphylococcus aureus
#=GS G0YZL7/232-386      DE ClfA
#=GS G0YZL7/232-386      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS A3F6H1/331-488      AC A3F6H1
#=GS A3F6H1/331-488      OS Staphylococcus aureus
#=GS A3F6H1/331-488      DE Clumping factor A
#=GS A3F6H1/331-488      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS G0XY45/369-526      AC G0XY45
#=GS G0XY45/369-526      OS Staphylococcus aureus
#=GS G0XY45/369-526      DE Clumping factor A
#=GS G0XY45/369-526      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS Q1HAN3/370-527      AC Q1HAN3
#=GS Q1HAN3/370-527      OS Staphylococcus aureus
#=GS Q1HAN3/370-527      DE Clumping factor A
#=GS Q1HAN3/370-527      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS G0XY37/370-527      AC G0XY37
#=GS G0XY37/370-527      OS Staphylococcus aureus
#=GS G0XY37/370-527      DE Clumping factor A
#=GS G0XY37/370-527      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS A0A0U1MG78/370-527  AC A0A0U1MG78
#=GS A0A0U1MG78/370-527  OS Staphylococcus aureus
#=GS A0A0U1MG78/370-527  DE Clumping factor A
#=GS A0A0U1MG78/370-527  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS A0A133Q6R7/132-289  AC A0A133Q6R7
#=GS A0A133Q6R7/132-289  OS Staphylococcus aureus
#=GS A0A133Q6R7/132-289  DE Uncharacterized protein
#=GS A0A133Q6R7/132-289  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS A0A077ULS1/364-521  AC A0A077ULS1
#=GS A0A077ULS1/364-521  OS Staphylococcus aureus
#=GS A0A077ULS1/364-521  DE Fibrinogen-binding protein A, clumping factor
#=GS A0A077ULS1/364-521  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GF SQ 20
2vr3B02/154-311             EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEV---------------------------------
5jq6A02/154-329             EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEVAFNNGSGSGDGIDCPVVP---------------
2vr3A02/154-311             EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEV---------------------------------
Q2G015/370-527              EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEV---------------------------------
1n67A02/169-359             EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEVAFNNGSGSGDGIDKPVVPEQPDEPGEIEPIPEK
A0A2C9TNP5/370-527          EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEV---------------------------------
Q53653/370-527              EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEV---------------------------------
Q6GIK4/370-527              EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDAQNTSIKVYKVDNASDLSESYYVNPDNFEDVTDSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEV---------------------------------
Q6GB45/369-526              EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYDSRFVWRSMSWDNEV---------------------------------
Q5HHM8/370-527              EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEV---------------------------------
A0A0H2XG16/370-527          EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEV---------------------------------
Q8NXJ1/369-526              EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYDSRFVWRSMSWDNEV---------------------------------
G0YZL7/232-386              EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYDSRFVWRSMSWD------------------------------------
A3F6H1/331-488              EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDAQNTSIKVYKVDNASDLSESYYVNPDNFEDVTDSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEV---------------------------------
G0XY45/369-526              EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEV---------------------------------
Q1HAN3/370-527              EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDAQNTSIKVYKVDNASDLSESYYVNPDNFEDVTDSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEV---------------------------------
G0XY37/370-527              EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTDSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYDSRFVWRSMSWDNEV---------------------------------
A0A0U1MG78/370-527          EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTESNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEV---------------------------------
A0A133Q6R7/132-289          EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEV---------------------------------
A0A077ULS1/364-521          EKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTNSNALIDANNTDIKVYKVDNAKDLSESYYVNPDNFEDVTSQVKISFPNANQYKVEFPTDDDQITTPYIVVVNGHIDPKSTGDLALRSTLYGYNSNIVWHSMSWDNEV---------------------------------
#=GC scorecons              99999999999999999999999999999999999999999999999999979999996799799999999969999997999799999967979799979999999797999999999999999999797999999999999797779899999777000000000000000000000000000000000
#=GC scorecons_70           **************************************************************************************************************************************************************_________________________________
#=GC scorecons_80           **********************************************************_*************_*****************_******************************************************__***********_________________________________
#=GC scorecons_90           ***************************************************_******__**_*********_******_***_******__*_*_***_*******_*_******************_*_************_*___*_*****____________________________________
//