# STOCKHOLM 1.0
#=GF ID 2.60.40.10/FF/000637
#=GF DE Basement membrane proteoglycan
#=GF AC 2.60.40.10/FF/000637
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 75.930
#=GS Q06561/1596-1684      AC Q06561
#=GS Q06561/1596-1684      OS Caenorhabditis elegans
#=GS Q06561/1596-1684      DE Basement membrane proteoglycan
#=GS Q06561/1596-1684      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q06561/1596-1684      DR GO; GO:0002119; GO:0005201; GO:0005604; GO:0007005; GO:0007517; GO:0008543; GO:0009792; GO:0016477; GO:0030239; GO:0031012; GO:0031581; GO:0040011; GO:0040017; GO:0046716; GO:0048644; GO:0055120; GO:0060279; GO:0060298; GO:0060465; GO:1905905; 
#=GS H9G354/1504-1598      AC H9G354
#=GS H9G354/1504-1598      OS Caenorhabditis elegans
#=GS H9G354/1504-1598      DE Basement membrane proteoglycan
#=GS H9G354/1504-1598      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H9G354/1504-1598      DR GO; GO:0005198; GO:0005604; GO:0007517; GO:0008543; GO:0009792; GO:0016477; GO:0031581; GO:0040011; GO:0040017; GO:0048644; 
#=GS H9G353/1504-1598      AC H9G353
#=GS H9G353/1504-1598      OS Caenorhabditis elegans
#=GS H9G353/1504-1598      DE Basement membrane proteoglycan
#=GS H9G353/1504-1598      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H9G353/1504-1598      DR GO; GO:0005198; GO:0005604; GO:0007517; GO:0008543; GO:0009792; GO:0016477; GO:0031581; GO:0040011; GO:0040017; GO:0048644; 
#=GS H9G348/1502-1591      AC H9G348
#=GS H9G348/1502-1591      OS Caenorhabditis elegans
#=GS H9G348/1502-1591      DE Basement membrane proteoglycan
#=GS H9G348/1502-1591      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H9G348/1502-1591      DR GO; GO:0005198; GO:0005604; GO:0007517; GO:0008543; GO:0009792; GO:0016477; GO:0031581; GO:0040011; GO:0040017; GO:0048644; 
#=GS H9G351/1409-1498      AC H9G351
#=GS H9G351/1409-1498      OS Caenorhabditis elegans
#=GS H9G351/1409-1498      DE Basement membrane proteoglycan
#=GS H9G351/1409-1498      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H9G351/1409-1498      DR GO; GO:0005198; GO:0005604; GO:0007517; GO:0008543; GO:0009792; GO:0016477; GO:0031581; GO:0040011; GO:0040017; GO:0048644; 
#=GS G5EEI5/1502-1591      AC G5EEI5
#=GS G5EEI5/1502-1591      OS Caenorhabditis elegans
#=GS G5EEI5/1502-1591      DE Basement membrane proteoglycan
#=GS G5EEI5/1502-1591      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS G5EEI5/1502-1591      DR GO; GO:0005198; GO:0005604; GO:0007517; GO:0008543; GO:0009792; GO:0016477; GO:0031581; GO:0040011; GO:0040017; GO:0048644; 
#=GS H9G349/1595-1684      AC H9G349
#=GS H9G349/1595-1684      OS Caenorhabditis elegans
#=GS H9G349/1595-1684      DE Basement membrane proteoglycan
#=GS H9G349/1595-1684      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H9G349/1595-1684      DR GO; GO:0005198; GO:0005604; GO:0007517; GO:0008543; GO:0009792; GO:0016477; GO:0031581; GO:0040011; GO:0040017; GO:0048644; 
#=GS H9G350/1595-1684      AC H9G350
#=GS H9G350/1595-1684      OS Caenorhabditis elegans
#=GS H9G350/1595-1684      DE Basement membrane proteoglycan
#=GS H9G350/1595-1684      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H9G350/1595-1684      DR GO; GO:0005198; GO:0005604; GO:0007517; GO:0008543; GO:0009792; GO:0016477; GO:0031581; GO:0040011; GO:0040017; GO:0048644; 
#=GS H9G352/1306-1395      AC H9G352
#=GS H9G352/1306-1395      OS Caenorhabditis elegans
#=GS H9G352/1306-1395      DE Basement membrane proteoglycan
#=GS H9G352/1306-1395      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H9G352/1306-1395      DR GO; GO:0005198; GO:0005604; GO:0007517; GO:0008543; GO:0009792; GO:0016477; GO:0031581; GO:0040011; GO:0040017; GO:0048644; 
#=GS A0A1T5HUZ1/2385-2473  AC A0A1T5HUZ1
#=GS A0A1T5HUZ1/2385-2473  OS Caenorhabditis elegans
#=GS A0A1T5HUZ1/2385-2473  DE Basement membrane proteoglycan
#=GS A0A1T5HUZ1/2385-2473  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H3FSB0/377-452        AC H3FSB0
#=GS H3FSB0/377-452        OS Pristionchus pacificus
#=GS H3FSB0/377-452        DE Uncharacterized protein
#=GS H3FSB0/377-452        DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS K7H923/1502-1593      AC K7H923
#=GS K7H923/1502-1593      OS Caenorhabditis japonica
#=GS K7H923/1502-1593      DE Uncharacterized protein
#=GS K7H923/1502-1593      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS A0A2G5UZ37/1500-1591  AC A0A2G5UZ37
#=GS A0A2G5UZ37/1500-1591  OS Caenorhabditis nigoni
#=GS A0A2G5UZ37/1500-1591  DE Uncharacterized protein
#=GS A0A2G5UZ37/1500-1591  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8XCB6/1590-1681      AC A8XCB6
#=GS A8XCB6/1590-1681      OS Caenorhabditis briggsae
#=GS A8XCB6/1590-1681      DE Protein CBR-UNC-52
#=GS A8XCB6/1590-1681      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A260ZRT2/243-333    AC A0A260ZRT2
#=GS A0A260ZRT2/243-333    OS Caenorhabditis latens
#=GS A0A260ZRT2/243-333    DE Uncharacterized protein
#=GS A0A260ZRT2/243-333    DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS E3MHR4/1615-1707      AC E3MHR4
#=GS E3MHR4/1615-1707      OS Caenorhabditis remanei
#=GS E3MHR4/1615-1707      DE CRE-UNC-52 protein
#=GS E3MHR4/1615-1707      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS G0N703/1587-1679      AC G0N703
#=GS G0N703/1587-1679      OS Caenorhabditis brenneri
#=GS G0N703/1587-1679      DE CBN-UNC-52 protein
#=GS G0N703/1587-1679      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS K7H924/1479-1570      AC K7H924
#=GS K7H924/1479-1570      OS Caenorhabditis japonica
#=GS K7H924/1479-1570      DE Uncharacterized protein
#=GS K7H924/1479-1570      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS A0A2G5UZ20/1500-1591  AC A0A2G5UZ20
#=GS A0A2G5UZ20/1500-1591  OS Caenorhabditis nigoni
#=GS A0A2G5UZ20/1500-1591  DE Uncharacterized protein
#=GS A0A2G5UZ20/1500-1591  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A260ZSW4/243-333    AC A0A260ZSW4
#=GS A0A260ZSW4/243-333    OS Caenorhabditis latens
#=GS A0A260ZSW4/243-333    DE Uncharacterized protein
#=GS A0A260ZSW4/243-333    DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A261AX12/1453-1545  AC A0A261AX12
#=GS A0A261AX12/1453-1545  OS Caenorhabditis remanei
#=GS A0A261AX12/1453-1545  DE Uncharacterized protein
#=GS A0A261AX12/1453-1545  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A260ZS72/243-333    AC A0A260ZS72
#=GS A0A260ZS72/243-333    OS Caenorhabditis latens
#=GS A0A260ZS72/243-333    DE Uncharacterized protein
#=GS A0A260ZS72/243-333    DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GF SQ 22
Q06561/1596-1684              -----PIRPIIDPAEQTVPEGSPFKIRCYVPGHPSVQLTF-RRVSGQLNEDADENNGLLAVQRAELTDEGDYICTARDPDTGAPIDSTPATVHV----T
H9G354/1504-1598              ----QAIQPQVDPPVQTVNEGEPSRIRCWVPGHPNIQLQFVKRGRRPLPAHARFSQGNLEIPRTLKSDEDEYICIATDPTTNRPVESNPARVIVKSQGT
H9G353/1504-1598              ----QAIQPQVDPPVQTVNEGEPSRIRCWVPGHPNIQLQFVKRGRRPLPAHARFSQGNLEIPRTLKSDEDEYICIATDPTTNRPVESNPARVIVKSHQE
H9G348/1502-1591              --QPQAIQPQVDPPVQTVNEGEPSRIRCWVPGHPNIQLQFVKRGRRPLPAHARFSQGNLEIPRTLKSDEDEYICIATDPTTNRPVESNPARV-------
H9G351/1409-1498              ----SPIRPIIDPAEQTVPEGSPFKIRCYVPGHPSVQLTF-RRVSGQLNEDADENNGLLAVQRAELTDEGDYICTARDPDTGAPIDSTPATVHV----T
G5EEI5/1502-1591              ----SPIRPIIDPAEQTVPEGSPFKIRCYVPGHPSVQLTF-RRVSGQLNEDADENNGLLAVQRAELTDEGDYICTARDPDTGAPIDSTPATVHV----T
H9G349/1595-1684              ----SPIRPIIDPAEQTVPEGSPFKIRCYVPGHPSVQLTF-RRVSGQLNEDADENNGLLAVQRAELTDEGDYICTARDPDTGAPIDSTPATVHV----T
H9G350/1595-1684              ----SPIRPIIDPAEQTVPEGSPFKIRCYVPGHPSVQLTF-RRVSGQLNEDADENNGLLAVQRAELTDEGDYICTARDPDTGAPIDSTPATVHV----T
H9G352/1306-1395              ----SPIRPIIDPAEQTVPEGSPFKIRCYVPGHPSVQLTF-RRVSGQLNEDADENNGLLAVQRAELTDEGDYICTARDPDTGAPIDSTPATVHV----T
A0A1T5HUZ1/2385-2473          -----PIRPIIDPAEQTVPEGSPFKIRCYVPGHPSVQLTF-RRVSGQLNEDADENNGLLAVQRAELTDEGDYICTARDPDTGAPIDSTPATVHV----T
H3FSB0/377-452                ------IEPQVDPSEQTIPEGKPFRIRCWVPGHPNLEVSW-RKVDGEMNDEAHEDRGVVSVQKSLLSDAGNYVCSARDPTSGE----------------
K7H923/1502-1593              VNQPQAIQPQVDPPVQTVNEGEPSRIRCWVPGHPNIQLQFVKRGRRPLPVHARVSQGNLEIPRTLKSDEDEYICIATDPNTNRPVESGPARV-------
A0A2G5UZ37/1500-1591          --VKSPIRPIVDPAEQTVPEGSPFRIRCYVPGHPNVQLSF-RRASGQLNEDADENNGLLAVQRAELSDEGDYICTARDPDTGAPIDSTPATVHV----T
A8XCB6/1590-1681              --VKSPIRPIVDPAEQTVPEGSPFRIRCYVPGHPNVQLSF-RRASGQLNEDADENNGLLAVQRAELSDEGDYICTARDPDTGAPIDSTPATVHV----T
A0A260ZRT2/243-333            ---KSPIRPIIDPAEQTVPEGSPFRIRCYVPGHPSVQLSF-RRASGQLNEDADENNGLLAVQRAELTDEGDYICTARDPDTGAPIDSSPATVHV----T
E3MHR4/1615-1707              -IVKSPIRPIIDPAEQTVPEGSPFRIRCYVPGHPSVQLSF-RRASGQLNEDADENNGLLAVQRAELTDEGDYICTARDPDTGAPIDSSPATVHV----T
G0N703/1587-1679              -IVKSPIRPIIDPAEQTVPEGSPFRIRCYVPGHPSVQLSF-RRVSGQLNEDADENNGLLAIQRAELSDEGDYICTARDPDTGAPIDSSPATVHV----T
K7H924/1479-1570              VNQPQAIQPQVDPPVQTVNEGEPSRIRCWVPGHPNIQLQFVKRGRRPLPVHARVSQGNLEIPRTLKSDEDEYICIATDPNTNRPVESGPARV-------
A0A2G5UZ20/1500-1591          --VKSPIRPIVDPAEQTVPEGSPFRIRCYVPGHPNVQLSF-RRASGQLNEDADENNGLLAVQRAELSDEGDYICTARDPDTGAPIDSTPATVHV----T
A0A260ZSW4/243-333            ---KSPIRPIIDPAEQTVPEGSPFRIRCYVPGHPSVQLSF-RRASGQLNEDADENNGLLAVQRAELTDEGDYICTARDPDTGAPIDSSPATVHV----T
A0A261AX12/1453-1545          -IVKSPIRPIIDPAEQTVPEGSPFRIRCYVPGHPSVQLSF-RRASGQLNEDADENNGLLAVQRAELTDEGDYICTARDPDTGAPIDSSPATVHV----T
A0A260ZS72/243-333            ---KSPIRPIIDPAEQTVPEGSPFRIRCYVPGHPSVQLSF-RRASGQLNEDADENNGLLAVQRAELTDEGDYICTARDPDTGAPIDSSPATVHV----T
#=GC scorecons                000135959479955998599595799959999966884717845558545954559485758545697669895959957557557377472300003
#=GC scorecons_70             ______*_*_***__***_**_*_****_*****_***_*_**____*___*____*_*_*_*___***_****_*_**_*__*__*_**_*_______
#=GC scorecons_80             ______*_*__**__***_**_*_****_*****__**_*__*____*___*____*_*___*____**__***_*_**_*__*__*_**_*_______
#=GC scorecons_90             ______*_*__**__***_**_*__***_*****__**____*____*___*____*_*___*____*___***_*_**____________________
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