# STOCKHOLM 1.0
#=GF ID 2.60.40.10/FF/002053
#=GF DE Triggering receptor expressed on myeloid cells 1
#=GF AC 2.60.40.10/FF/002053
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 50.995
#=GS 1smoB00/1-119      AC Q9NP99
#=GS 1smoB00/1-119      OS Homo sapiens
#=GS 1smoB00/1-119      DE Triggering receptor expressed on myeloid cells 1
#=GS 1smoB00/1-119      DR CATH; 1smo; B:26-135; 
#=GS 1smoB00/1-119      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 1smoB00/1-119      DR GO; GO:0005886; GO:0006959; GO:0035556; GO:0038023; GO:0045087; GO:0050776; GO:0050900; GO:0097110; 
#=GS Q9JKE2/22-139      AC Q9JKE2
#=GS Q9JKE2/22-139      OS Mus musculus
#=GS Q9JKE2/22-139      DE Triggering receptor expressed on myeloid cells 1
#=GS Q9JKE2/22-139      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS Q9JKE2/22-139      DR GO; GO:0002374; GO:0016477; GO:0030593; GO:0042107; GO:0050755; GO:0070945; GO:0072672; GO:0097110; 
#=GS 1smoA00/1-119      AC Q9NP99
#=GS 1smoA00/1-119      OS Homo sapiens
#=GS 1smoA00/1-119      DE Triggering receptor expressed on myeloid cells 1
#=GS 1smoA00/1-119      DR CATH; 1smo; A:21-133; 
#=GS 1smoA00/1-119      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 1smoA00/1-119      DR GO; GO:0005886; GO:0006959; GO:0035556; GO:0038023; GO:0045087; GO:0050776; GO:0050900; GO:0097110; 
#=GS 1q8mD00/1-127      AC Q9NP99
#=GS 1q8mD00/1-127      OS Homo sapiens
#=GS 1q8mD00/1-127      DE Triggering receptor expressed on myeloid cells 1
#=GS 1q8mD00/1-127      DR CATH; 1q8m; D:16-136; 
#=GS 1q8mD00/1-127      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 1q8mD00/1-127      DR GO; GO:0005886; GO:0006959; GO:0035556; GO:0038023; GO:0045087; GO:0050776; GO:0050900; GO:0097110; 
#=GS 1q8mC00/1-127      AC Q9NP99
#=GS 1q8mC00/1-127      OS Homo sapiens
#=GS 1q8mC00/1-127      DE Triggering receptor expressed on myeloid cells 1
#=GS 1q8mC00/1-127      DR CATH; 1q8m; C:16-136; 
#=GS 1q8mC00/1-127      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 1q8mC00/1-127      DR GO; GO:0005886; GO:0006959; GO:0035556; GO:0038023; GO:0045087; GO:0050776; GO:0050900; GO:0097110; 
#=GS 1q8mB00/1-127      AC Q9NP99
#=GS 1q8mB00/1-127      OS Homo sapiens
#=GS 1q8mB00/1-127      DE Triggering receptor expressed on myeloid cells 1
#=GS 1q8mB00/1-127      DR CATH; 1q8m; B:16-136; 
#=GS 1q8mB00/1-127      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 1q8mB00/1-127      DR GO; GO:0005886; GO:0006959; GO:0035556; GO:0038023; GO:0045087; GO:0050776; GO:0050900; GO:0097110; 
#=GS 1q8mA00/1-127      AC Q9NP99
#=GS 1q8mA00/1-127      OS Homo sapiens
#=GS 1q8mA00/1-127      DE Triggering receptor expressed on myeloid cells 1
#=GS 1q8mA00/1-127      DR CATH; 1q8m; A:16-136; 
#=GS 1q8mA00/1-127      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 1q8mA00/1-127      DR GO; GO:0005886; GO:0006959; GO:0035556; GO:0038023; GO:0045087; GO:0050776; GO:0050900; GO:0097110; 
#=GS Q9NP99/21-139      AC Q9NP99
#=GS Q9NP99/21-139      OS Homo sapiens
#=GS Q9NP99/21-139      DE Triggering receptor expressed on myeloid cells 1
#=GS Q9NP99/21-139      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q9NP99/21-139      DR GO; GO:0005886; GO:0006959; GO:0035556; GO:0038023; GO:0045087; GO:0050776; GO:0050900; GO:0097110; 
#=GS K7EKM5/21-139      AC K7EKM5
#=GS K7EKM5/21-139      OS Homo sapiens
#=GS K7EKM5/21-139      DE Triggering receptor expressed on myeloid cells 1, isoform CRA_b
#=GS K7EKM5/21-139      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q38L15/21-139      AC Q38L15
#=GS Q38L15/21-139      OS Homo sapiens
#=GS Q38L15/21-139      DE Triggering receptor expressed on myeloid cells 1
#=GS Q38L15/21-139      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS G1QYL5/21-139      AC G1QYL5
#=GS G1QYL5/21-139      OS Nomascus leucogenys
#=GS G1QYL5/21-139      DE Uncharacterized protein
#=GS G1QYL5/21-139      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS A0A2J8Y401/21-136  AC A0A2J8Y401
#=GS A0A2J8Y401/21-136  OS Pongo abelii
#=GS A0A2J8Y401/21-136  DE TREM1 isoform 2
#=GS A0A2J8Y401/21-136  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS A0A2I2ZKG7/21-138  AC A0A2I2ZKG7
#=GS A0A2I2ZKG7/21-138  OS Gorilla gorilla gorilla
#=GS A0A2I2ZKG7/21-138  DE Triggering receptor expressed on myeloid cells 1
#=GS A0A2I2ZKG7/21-138  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS A0A2R9C4Y0/21-139  AC A0A2R9C4Y0
#=GS A0A2R9C4Y0/21-139  OS Pan paniscus
#=GS A0A2R9C4Y0/21-139  DE Uncharacterized protein
#=GS A0A2R9C4Y0/21-139  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; 
#=GS A0A2I3SUN9/57-175  AC A0A2I3SUN9
#=GS A0A2I3SUN9/57-175  OS Pan troglodytes
#=GS A0A2I3SUN9/57-175  DE Uncharacterized protein
#=GS A0A2I3SUN9/57-175  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS Q5RDA5/21-136      AC Q5RDA5
#=GS Q5RDA5/21-136      OS Pongo abelii
#=GS Q5RDA5/21-136      DE Triggering receptor expressed on myeloid cells 1
#=GS Q5RDA5/21-136      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS G3QX41/21-138      AC G3QX41
#=GS G3QX41/21-138      OS Gorilla gorilla gorilla
#=GS G3QX41/21-138      DE Triggering receptor expressed on myeloid cells 1
#=GS G3QX41/21-138      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS A0A2R9C4Z3/57-175  AC A0A2R9C4Z3
#=GS A0A2R9C4Z3/57-175  OS Pan paniscus
#=GS A0A2R9C4Z3/57-175  DE Uncharacterized protein
#=GS A0A2R9C4Z3/57-175  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; 
#=GS A0A2I2ZDZ0/21-138  AC A0A2I2ZDZ0
#=GS A0A2I2ZDZ0/21-138  OS Gorilla gorilla gorilla
#=GS A0A2I2ZDZ0/21-138  DE Triggering receptor expressed on myeloid cells 1
#=GS A0A2I2ZDZ0/21-138  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS H2QSZ3/21-139      AC H2QSZ3
#=GS H2QSZ3/21-139      OS Pan troglodytes
#=GS H2QSZ3/21-139      DE TREM1 isoform 3
#=GS H2QSZ3/21-139      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS A0A2I3HAV2/21-138  AC A0A2I3HAV2
#=GS A0A2I3HAV2/21-138  OS Nomascus leucogenys
#=GS A0A2I3HAV2/21-138  DE Uncharacterized protein
#=GS A0A2I3HAV2/21-138  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS A0A2J8Y406/21-136  AC A0A2J8Y406
#=GS A0A2J8Y406/21-136  OS Pongo abelii
#=GS A0A2J8Y406/21-136  DE TREM1 isoform 5
#=GS A0A2J8Y406/21-136  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GF SQ 22
1smoB00/1-119              -----ATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVT---KGFSG
Q9JKE2/22-139              ------IVLEEERYDLVEGQTLTVKCPFNIMKYANSQKAWQRLPDGKEPLTLVVTQRPFTRPSEVHMGKFTLKHDPSEAMLQVQMTDLQVTDSGLYRCVIYHPPNDPVVLFHPVRLVVT---KGSSD
1smoA00/1-119              -----ATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVT---KGFSG
1q8mD00/1-127              MELRAATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTLEHHHHHH
1q8mC00/1-127              MELRAATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTLEHHHHHH
1q8mB00/1-127              MELRAATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTLEHHHHHH
1q8mA00/1-127              MELRAATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTLEHHHHHH
Q9NP99/21-139              -----ATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVT---KGFSG
K7EKM5/21-139              -----ATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVT---KGFSG
Q38L15/21-139              -----ATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVT---KGFSG
G1QYL5/21-139              -----ATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEKPKTLACTERPSENSHPVQVGRIIMEDYHDHGLLHVRMTNLLVEDSGLYQCVIYQPPKEPHMLFHRIRLVVT---KGSSG
A0A2J8Y401/21-136          -----ATKLTEEKYELKEGQTLDVKCDYMLEKFASSRKAWQIIRDGEMPQTLACTERP---SHPVQVGRIILEDYHDHGLLHVRMTNLQVEDSGLYQCVIYQPPKEPHVLFDRIRLVVT---KGSSG
A0A2I2ZKG7/21-138          -----ATKLTEEKYELKEGQTLDVKCDCTLEEFASS-KAWQIIRDGEMPKTLACTERPSENSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDCIRLVVT---KGFSG
A0A2R9C4Y0/21-139          -----ATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSENSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVT---KGFSG
A0A2I3SUN9/57-175          -----ATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSENSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHILFDRIRLVVT---KGFSG
Q5RDA5/21-136              -----ATKLTEEKYELKEGQTLDVKCDYMLEKFASSRKAWQIIRDGEMPQTLACTERP---SHPVQVGRIILEDYHDHGLLHVRMTNLQVEDSGLYQCVIYQPPKEPHVLFDRIRLVVT---KGSSG
G3QX41/21-138              -----ATKLTEEKYELKEGQTLDVKCDCTLEEFASS-KAWQIIRDGEMPKTLACTERPSENSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDCIRLVVT---KGFSG
A0A2R9C4Z3/57-175          -----ATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSENSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVT---KGFSG
A0A2I2ZDZ0/21-138          -----ATKLTEEKYELKEGQTLDVKCDCTLEEFASS-KAWQIIRDGEMPKTLACTERPSENSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDCIRLVVT---KGFRC
H2QSZ3/21-139              -----ATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSENSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHILFDRIRLVVT---KGFRC
A0A2I3HAV2/21-138          -----ATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEKPKTLACTERPSENSHPVQVGRIIMEDYHDHGLLHVRMTNLLVEDSGLYQCVIYQPPKEPHMLFHRIRLVVT---KGFL-
A0A2J8Y406/21-136          -----ATKLTEEKYELKEGQTLDVKCDYMLEKFASSRKAWQIIRDGEMPQTLACTERP---SHPVQVGRIILEDYHDHGLLHVRMTNLQVEDSGLYQCVIYQPPKEPHVLFDRIRLVVT---KGSSG
#=GC scorecons             0000067696997979699999699967676789795999967699759599769799435766977977787767777796979579796999997999979977966996579999900066454
#=GC scorecons_70          ______**********************_*******_**********_*_********___********************_***_**************************_******___*____
#=GC scorecons_80          ______*_*_******_*****_***___*_*****_****_*_***_*_***_****___*__*****_***_____***_***_****_****************__**__******________
#=GC scorecons_90          ________*_**_*_*_*****_***_______*_*_****___**__*_**__*_**______*__*___*________*_*_*__*_*_*****_****_**__*__**___*****________
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