# STOCKHOLM 1.0
#=GF ID 2.60.260.20/FF/000031
#=GF DE Molecular chaperone DnaJ
#=GF AC 2.60.260.20/FF/000031
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 73.128
#=GS P9WNV7/114-139_218-253      AC P9WNV7
#=GS P9WNV7/114-139_218-253      OS Mycobacterium tuberculosis H37Rv
#=GS P9WNV7/114-139_218-253      DE Chaperone protein DnaJ 2
#=GS P9WNV7/114-139_218-253      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS P9WNV7/114-139_218-253      DR GO; GO:0005618; 
#=GS Q7UM96/118-141_216-254      AC Q7UM96
#=GS Q7UM96/118-141_216-254      OS Rhodopirellula baltica SH 1
#=GS Q7UM96/118-141_216-254      DE Chaperone protein DnaJ
#=GS Q7UM96/118-141_216-254      DR ORG; Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula; Rhodopirellula baltica; 
#=GS P0DJM1/116-143_220-255      AC P0DJM1
#=GS P0DJM1/116-143_220-255      OS Listeria monocytogenes EGD-e
#=GS P0DJM1/116-143_220-255      DE Chaperone protein DnaJ
#=GS P0DJM1/116-143_220-255      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GS A0A0J1B9V5/119-142_217-255  AC A0A0J1B9V5
#=GS A0A0J1B9V5/119-142_217-255  OS Rhodopirellula islandica
#=GS A0A0J1B9V5/119-142_217-255  DE Chaperone protein DnaJ
#=GS A0A0J1B9V5/119-142_217-255  DR ORG; Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula; Rhodopirellula islandica; 
#=GS M5TXF1/117-139_214-252      AC M5TXF1
#=GS M5TXF1/117-139_214-252      OS Rhodopirellula sallentina SM41
#=GS M5TXF1/117-139_214-252      DE Chaperone protein DnaJ
#=GS M5TXF1/117-139_214-252      DR ORG; Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula; Rhodopirellula sallentina; 
#=GS A0A0I9TNV8/114-139_218-253  AC A0A0I9TNV8
#=GS A0A0I9TNV8/114-139_218-253  OS Mycobacterium haemophilum
#=GS A0A0I9TNV8/114-139_218-253  DE Chaperone protein DnaJ
#=GS A0A0I9TNV8/114-139_218-253  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium haemophilum; 
#=GS A0A2U3PDL1/115-140_219-254  AC A0A2U3PDL1
#=GS A0A2U3PDL1/115-140_219-254  OS Mycobacterium sp. AB215
#=GS A0A2U3PDL1/115-140_219-254  DE DnaJ-class molecular chaperone with C-terminal Zn finger domain
#=GS A0A2U3PDL1/115-140_219-254  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium sp. AB215; 
#=GS H1GDP4/115-142_219-254      AC H1GDP4
#=GS H1GDP4/115-142_219-254      OS Listeria innocua ATCC 33091
#=GS H1GDP4/115-142_219-254      DE Chaperone protein DnaJ
#=GS H1GDP4/115-142_219-254      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria innocua; 
#=GS W7DFS3/118-145_222-256      AC W7DFS3
#=GS W7DFS3/118-145_222-256      OS Listeria riparia FSL S10-1204
#=GS W7DFS3/118-145_222-256      DE Chaperone protein DnaJ
#=GS W7DFS3/118-145_222-256      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria riparia; 
#=GS G0TP56/114-139_218-253      AC G0TP56
#=GS G0TP56/114-139_218-253      OS Mycobacterium canettii CIPT 140010059
#=GS G0TP56/114-139_218-253      DE Chaperone protein DnaJ
#=GS G0TP56/114-139_218-253      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium canettii; 
#=GS A0A0K2HY58/114-139_218-253  AC A0A0K2HY58
#=GS A0A0K2HY58/114-139_218-253  OS Mycobacterium tuberculosis variant bovis BCG
#=GS A0A0K2HY58/114-139_218-253  DE Chaperone protein DnaJ
#=GS A0A0K2HY58/114-139_218-253  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS P63967/114-139_218-253      AC P63967
#=GS P63967/114-139_218-253      OS Mycobacterium tuberculosis variant bovis AF2122/97
#=GS P63967/114-139_218-253      DE Chaperone protein DnaJ 2
#=GS P63967/114-139_218-253      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS P9WNV6/114-139_218-253      AC P9WNV6
#=GS P9WNV6/114-139_218-253      OS Mycobacterium tuberculosis CDC1551
#=GS P9WNV6/114-139_218-253      DE Chaperone protein DnaJ 2
#=GS P9WNV6/114-139_218-253      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A120J1W0/114-139_218-253  AC A0A120J1W0
#=GS A0A120J1W0/114-139_218-253  OS Mycobacterium tuberculosis variant africanum
#=GS A0A120J1W0/114-139_218-253  DE Chaperone protein DnaJ
#=GS A0A120J1W0/114-139_218-253  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A0H3M8I0/114-139_218-253  AC A0A0H3M8I0
#=GS A0A0H3M8I0/114-139_218-253  OS Mycobacterium tuberculosis variant bovis BCG str. Pasteur 1173P2
#=GS A0A0H3M8I0/114-139_218-253  DE Chaperone protein DnaJ
#=GS A0A0H3M8I0/114-139_218-253  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A045JNI1/114-139_218-253  AC A0A045JNI1
#=GS A0A045JNI1/114-139_218-253  OS Mycobacterium tuberculosis
#=GS A0A045JNI1/114-139_218-253  DE Chaperone protein DnaJ
#=GS A0A045JNI1/114-139_218-253  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A5U566/114-139_218-253      AC A5U566
#=GS A5U566/114-139_218-253      OS Mycobacterium tuberculosis H37Ra
#=GS A5U566/114-139_218-253      DE Chaperone protein DnaJ
#=GS A5U566/114-139_218-253      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A328GFW9/114-139_218-253  AC A0A328GFW9
#=GS A0A328GFW9/114-139_218-253  OS Mycobacterium tuberculosis variant pinnipedii
#=GS A0A328GFW9/114-139_218-253  DE Chaperone protein DnaJ
#=GS A0A328GFW9/114-139_218-253  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A0H3LIC6/114-139_218-253  AC A0A0H3LIC6
#=GS A0A0H3LIC6/114-139_218-253  OS Mycobacterium tuberculosis str. Erdman = ATCC 35801
#=GS A0A0H3LIC6/114-139_218-253  DE Chaperone protein DnaJ
#=GS A0A0H3LIC6/114-139_218-253  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A472AS97/115-142_219-254  AC A0A472AS97
#=GS A0A472AS97/115-142_219-254  OS Listeria monocytogenes CFSAN002202
#=GS A0A472AS97/115-142_219-254  DE Molecular chaperone DnaJ
#=GS A0A472AS97/115-142_219-254  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GS Q92BN9/115-142_219-254      AC Q92BN9
#=GS Q92BN9/115-142_219-254      OS Listeria innocua Clip11262
#=GS Q92BN9/115-142_219-254      DE Chaperone protein DnaJ
#=GS Q92BN9/115-142_219-254      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria innocua; 
#=GS B8DE39/115-142_219-254      AC B8DE39
#=GS B8DE39/115-142_219-254      OS Listeria monocytogenes HCC23
#=GS B8DE39/115-142_219-254      DE Chaperone protein DnaJ
#=GS B8DE39/115-142_219-254      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GS A0A392ZBZ8/115-142_219-254  AC A0A392ZBZ8
#=GS A0A392ZBZ8/115-142_219-254  OS Listeria monocytogenes
#=GS A0A392ZBZ8/115-142_219-254  DE Chaperone protein DnaJ
#=GS A0A392ZBZ8/115-142_219-254  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GS A0A473HKV8/115-142_219-254  AC A0A473HKV8
#=GS A0A473HKV8/115-142_219-254  OS Listeria innocua
#=GS A0A473HKV8/115-142_219-254  DE Molecular chaperone DnaJ
#=GS A0A473HKV8/115-142_219-254  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria innocua; 
#=GS A0A0E0UVT3/115-142_219-254  AC A0A0E0UVT3
#=GS A0A0E0UVT3/115-142_219-254  OS Listeria monocytogenes M7
#=GS A0A0E0UVT3/115-142_219-254  DE Chaperone protein DnaJ
#=GS A0A0E0UVT3/115-142_219-254  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GS A0A478C9P3/115-142_219-254  AC A0A478C9P3
#=GS A0A478C9P3/115-142_219-254  OS Listeria monocytogenes serotype 1/2b
#=GS A0A478C9P3/115-142_219-254  DE Molecular chaperone DnaJ
#=GS A0A478C9P3/115-142_219-254  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GS A0A0E1RCW5/115-142_219-254  AC A0A0E1RCW5
#=GS A0A0E1RCW5/115-142_219-254  OS Listeria monocytogenes serotype 4b str. LL195
#=GS A0A0E1RCW5/115-142_219-254  DE Chaperone protein DnaJ
#=GS A0A0E1RCW5/115-142_219-254  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GS C1KVB9/115-142_219-254      AC C1KVB9
#=GS C1KVB9/115-142_219-254      OS Listeria monocytogenes serotype 4b str. CLIP 80459
#=GS C1KVB9/115-142_219-254      DE Chaperone protein DnaJ
#=GS C1KVB9/115-142_219-254      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GS Q71ZJ8/115-142_219-254      AC Q71ZJ8
#=GS Q71ZJ8/115-142_219-254      OS Listeria monocytogenes serotype 4b str. F2365
#=GS Q71ZJ8/115-142_219-254      DE Chaperone protein DnaJ
#=GS Q71ZJ8/115-142_219-254      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GS A0A0B8RG58/115-142_219-254  AC A0A0B8RG58
#=GS A0A0B8RG58/115-142_219-254  OS Listeria monocytogenes
#=GS A0A0B8RG58/115-142_219-254  DE Chaperone protein DnaJ
#=GS A0A0B8RG58/115-142_219-254  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GS A0A3T1U0J3/116-143_220-255  AC A0A3T1U0J3
#=GS A0A3T1U0J3/116-143_220-255  OS Listeria monocytogenes serotype 1/2a
#=GS A0A3T1U0J3/116-143_220-255  DE Chaperone protein DnaJ
#=GS A0A3T1U0J3/116-143_220-255  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GS G2K045/116-143_220-255      AC G2K045
#=GS G2K045/116-143_220-255      OS Listeria monocytogenes 10403S
#=GS G2K045/116-143_220-255      DE Chaperone protein DnaJ
#=GS G2K045/116-143_220-255      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GS A0A3Q0NEK4/116-143_220-255  AC A0A3Q0NEK4
#=GS A0A3Q0NEK4/116-143_220-255  OS Listeria monocytogenes EGD
#=GS A0A3Q0NEK4/116-143_220-255  DE Chaperone protein DnaJ
#=GS A0A3Q0NEK4/116-143_220-255  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GS A0A3H0R0D0/116-143_220-255  AC A0A3H0R0D0
#=GS A0A3H0R0D0/116-143_220-255  OS Listeria monocytogenes
#=GS A0A3H0R0D0/116-143_220-255  DE Chaperone protein DnaJ
#=GS A0A3H0R0D0/116-143_220-255  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; 
#=GF SQ 34
P9WNV7/114-139_218-253              -PGSDSLLRMRLDLEECATGVTKQVTV--SVKIPAGVGDGMRVRLAAQGEVGPGGGPAGDLYVEV
Q7UM96/118-141_216-254              RRGADVRCDVTLTLEEAARGCHKDAEM--NVEIPAGVDDGMRVRLQGEGEPSPDGGPNGDCYCFI
P0DJM1/116-143_220-255              -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
A0A0J1B9V5/119-142_217-255          RRGADVRCDVTLTLEEAARGCHKDAEM--NVEIPAGVDDGMRVRLQGEGEPSPDGGPNGDCYCFI
M5TXF1/117-139_214-252              -PGADIRCDVTLTLEEAARGCHKDAEL--NVEIPAGVDDGMRVRLQGEGEPSPDGGPPGDCYCFI
A0A0I9TNV8/114-139_218-253          -PGSDSLLRMRLDLEECATGVTKQVTV--TVKIPAGVGDGMRVRLAAQGEVGPGGGPAGDLYVEV
A0A2U3PDL1/115-140_219-254          -PGSDSLLRMRLDLEECATGVTKQVTV--SVKIPAGVGDGMRVRLAAQGEVGPGGGPAGDLYVEV
H1GDP4/115-142_219-254              -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
W7DFS3/118-145_222-256              -QGSDMQYTMRLKFKEAIFGKDAEIEIPRKLKVPAGVDDGQQMRVAGEGEGGINGGPNGDLYVV-
G0TP56/114-139_218-253              -PGSDSLLRMRLDLEECATGVTKQVTV--SVKIPAGVGDGMRVRLAAQGEVGPGGGPAGDLYVEV
A0A0K2HY58/114-139_218-253          -PGSDSLLRMRLDLEECATGVTKQVTV--SVKIPAGVGDGMRVRLAAQGEVGPGGGPAGDLYVEV
P63967/114-139_218-253              -PGSDSLLRMRLDLEECATGVTKQVTV--SVKIPAGVGDGMRVRLAAQGEVGPGGGPAGDLYVEV
P9WNV6/114-139_218-253              -PGSDSLLRMRLDLEECATGVTKQVTV--SVKIPAGVGDGMRVRLAAQGEVGPGGGPAGDLYVEV
A0A120J1W0/114-139_218-253          -PGSDSLLRMRLDLEECATGVTKQVTV--SVKIPAGVGDGMRVRLAAQGEVGPGGGPAGDLYVEV
A0A0H3M8I0/114-139_218-253          -PGSDSLLRMRLDLEECATGVTKQVTV--SVKIPAGVGDGMRVRLAAQGEVGPGGGPAGDLYVEV
A0A045JNI1/114-139_218-253          -PGSDSLLRMRLDLEECATGVTKQVTV--SVKIPAGVGDGMRVRLAAQGEVGPGGGPAGDLYVEV
A5U566/114-139_218-253              -PGSDSLLRMRLDLEECATGVTKQVTV--SVKIPAGVGDGMRVRLAAQGEVGPGGGPAGDLYVEV
A0A328GFW9/114-139_218-253          -PGSDSLLRMRLDLEECATGVTKQVTV--SVKIPAGVGDGMRVRLAAQGEVGPGGGPAGDLYVEV
A0A0H3LIC6/114-139_218-253          -PGSDSLLRMRLDLEECATGVTKQVTV--SVKIPAGVGDGMRVRLAAQGEVGPGGGPAGDLYVEV
A0A472AS97/115-142_219-254          -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
Q92BN9/115-142_219-254              -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
B8DE39/115-142_219-254              -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
A0A392ZBZ8/115-142_219-254          -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
A0A473HKV8/115-142_219-254          -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
A0A0E0UVT3/115-142_219-254          -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
A0A478C9P3/115-142_219-254          -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
A0A0E1RCW5/115-142_219-254          -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
C1KVB9/115-142_219-254              -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
Q71ZJ8/115-142_219-254              -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
A0A0B8RG58/115-142_219-254          -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
A0A3T1U0J3/116-143_220-255          -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
G2K045/116-143_220-255              -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
A0A3Q0NEK4/116-143_220-255          -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
A0A3H0R0D0/116-143_220-255          -QGSDLQYTMRLKFKEAIFGKDAEIEIPRKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVF
#=GC scorecons                      05979444477956695549445565611587799995995669656699575599959979745
#=GC scorecons_70                   __***____***_*_*___*______*___*******_**_****_****_*__***_*****__
#=GC scorecons_80                   __***____***___*___*__________**_****_**___*____**_*__***_**_**__
#=GC scorecons_90                   __*_*______*___*___*__________*__****_**___*____**____***_**_*___
//