# STOCKHOLM 1.0
#=GF ID 2.60.120.650/FF/000035
#=GF DE PHD transcription factor Rum1
#=GF AC 2.60.120.650/FF/000035
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 89.670
#=GS T1FW30/6-97         AC T1FW30
#=GS T1FW30/6-97         OS Helobdella robusta
#=GS T1FW30/6-97         DE Uncharacterized protein
#=GS T1FW30/6-97         DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS A0A1U8QR91/70-149   AC A0A1U8QR91
#=GS A0A1U8QR91/70-149   OS Aspergillus nidulans FGSC A4
#=GS A0A1U8QR91/70-149   DE Uncharacterized protein
#=GS A0A1U8QR91/70-149   DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS Q5AU19/70-149       AC Q5AU19
#=GS Q5AU19/70-149       OS Aspergillus nidulans FGSC A4
#=GS Q5AU19/70-149       DE PHD transcription factor (Rum1), putative (AFU_orthologue AFUA_5G03430)
#=GS Q5AU19/70-149       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS A9UXX0/2-108        AC A9UXX0
#=GS A9UXX0/2-108        OS Monosiga brevicollis
#=GS A9UXX0/2-108        DE Predicted protein
#=GS A9UXX0/2-108        DR ORG; Eukaryota; Choanoflagellida; Salpingoecidae; Monosiga; Monosiga brevicollis; 
#=GS X1WCG3/2-85         AC X1WCG3
#=GS X1WCG3/2-85         OS Danio rerio
#=GS X1WCG3/2-85         DE Lysine (K)-specific demethylase 5Ba
#=GS X1WCG3/2-85         DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS Q5KHN4/171-264      AC Q5KHN4
#=GS Q5KHN4/171-264      OS Cryptococcus neoformans var. neoformans JEC21
#=GS Q5KHN4/171-264      DE Uncharacterized protein
#=GS Q5KHN4/171-264      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS K9J7Q2/4-92         AC K9J7Q2
#=GS K9J7Q2/4-92         OS Xenopus tropicalis
#=GS K9J7Q2/4-92         DE Lysine demethylase 5A
#=GS K9J7Q2/4-92         DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS Q5Y235/171-264      AC Q5Y235
#=GS Q5Y235/171-264      OS Cryptococcus gattii VGIII
#=GS Q5Y235/171-264      DE RUM1p
#=GS Q5Y235/171-264      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIII; 
#=GS E6RBS2/171-264      AC E6RBS2
#=GS E6RBS2/171-264      OS Cryptococcus gattii WM276
#=GS E6RBS2/171-264      DE PHD transcription factor Rum1
#=GS E6RBS2/171-264      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS A0A0D0YSA7/171-264  AC A0A0D0YSA7
#=GS A0A0D0YSA7/171-264  OS Cryptococcus gattii VGIV IND107
#=GS A0A0D0YSA7/171-264  DE Unplaced genomic scaffold supercont2.9, whole genome shotgun sequence
#=GS A0A0D0YSA7/171-264  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIV; 
#=GS A0A397GLQ6/75-165   AC A0A397GLQ6
#=GS A0A397GLQ6/75-165   OS Aspergillus thermomutatus
#=GS A0A397GLQ6/75-165   DE Uncharacterized protein
#=GS A0A397GLQ6/75-165   DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus thermomutatus; 
#=GS A0A0K8L985/75-165   AC A0A0K8L985
#=GS A0A0K8L985/75-165   OS Aspergillus udagawae
#=GS A0A0K8L985/75-165   DE Lid2 complex component lid2
#=GS A0A0K8L985/75-165   DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus udagawae; 
#=GS Q4WEL5/75-165       AC Q4WEL5
#=GS Q4WEL5/75-165       OS Aspergillus fumigatus Af293
#=GS Q4WEL5/75-165       DE PHD transcription factor (Rum1), putative
#=GS Q4WEL5/75-165       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A0S7E2H6/75-165   AC A0A0S7E2H6
#=GS A0A0S7E2H6/75-165   OS Aspergillus lentulus
#=GS A0A0S7E2H6/75-165   DE Lid2 complex component lid2
#=GS A0A0S7E2H6/75-165   DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus lentulus; 
#=GS A0A3A2ZF67/75-161   AC A0A3A2ZF67
#=GS A0A3A2ZF67/75-161   OS Aspergillus sclerotialis
#=GS A0A3A2ZF67/75-161   DE PHD transcription factor Rum1
#=GS A0A3A2ZF67/75-161   DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus sclerotialis; 
#=GS A0A319DFK6/70-153   AC A0A319DFK6
#=GS A0A319DFK6/70-153   OS Aspergillus ellipticus CBS 707.79
#=GS A0A319DFK6/70-153   DE PLU-1-domain-containing protein
#=GS A0A319DFK6/70-153   DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus ellipticus; 
#=GS A0A317W650/70-153   AC A0A317W650
#=GS A0A317W650/70-153   OS Aspergillus heteromorphus CBS 117.55
#=GS A0A317W650/70-153   DE PLU-1-domain-containing protein
#=GS A0A317W650/70-153   DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus heteromorphus; 
#=GS Q8J0Z1/171-264      AC Q8J0Z1
#=GS Q8J0Z1/171-264      OS Cryptococcus neoformans var. grubii
#=GS Q8J0Z1/171-264      DE RUM1
#=GS Q8J0Z1/171-264      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS Q8J0W7/171-264      AC Q8J0W7
#=GS Q8J0W7/171-264      OS Cryptococcus neoformans var. neoformans
#=GS Q8J0W7/171-264      DE RUM1
#=GS Q8J0W7/171-264      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS F5HBY7/171-264      AC F5HBY7
#=GS F5HBY7/171-264      OS Cryptococcus neoformans var. neoformans B-3501A
#=GS F5HBY7/171-264      DE Uncharacterized protein
#=GS F5HBY7/171-264      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A0D0Y0Q9/171-264  AC A0A0D0Y0Q9
#=GS A0A0D0Y0Q9/171-264  OS Cryptococcus gattii EJB2
#=GS A0A0D0Y0Q9/171-264  DE Unplaced genomic scaffold supercont1.249, whole genome shotgun sequence
#=GS A0A0D0Y0Q9/171-264  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS A0A0D0TKV7/171-264  AC A0A0D0TKV7
#=GS A0A0D0TKV7/171-264  OS Cryptococcus gattii CA1280
#=GS A0A0D0TKV7/171-264  DE Unplaced genomic scaffold supercont1.9, whole genome shotgun sequence
#=GS A0A0D0TKV7/171-264  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIII; 
#=GS F6KJQ8/171-264      AC F6KJQ8
#=GS F6KJQ8/171-264      OS Cryptococcus gattii VGIII
#=GS F6KJQ8/171-264      DE RUM1
#=GS F6KJQ8/171-264      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIII; 
#=GS J9VMK9/171-264      AC J9VMK9
#=GS J9VMK9/171-264      OS Cryptococcus neoformans var. grubii H99
#=GS J9VMK9/171-264      DE Histone demethylase JARID1
#=GS J9VMK9/171-264      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A225Z4R9/171-264  AC A0A225Z4R9
#=GS A0A225Z4R9/171-264  OS Cryptococcus neoformans var. grubii c45
#=GS A0A225Z4R9/171-264  DE Histone demethylase JARID1
#=GS A0A225Z4R9/171-264  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS Q5Y259/171-264      AC Q5Y259
#=GS Q5Y259/171-264      OS Cryptococcus gattii VGIII
#=GS Q5Y259/171-264      DE RUM1p
#=GS Q5Y259/171-264      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIII; 
#=GS B0Y2T9/75-165       AC B0Y2T9
#=GS B0Y2T9/75-165       OS Aspergillus fumigatus A1163
#=GS B0Y2T9/75-165       DE PHD transcription factor (Rum1), putative
#=GS B0Y2T9/75-165       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A229Y765/75-165   AC A0A229Y765
#=GS A0A229Y765/75-165   OS Aspergillus fumigatus
#=GS A0A229Y765/75-165   DE Uncharacterized protein
#=GS A0A229Y765/75-165   DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A0J5PU20/75-165   AC A0A0J5PU20
#=GS A0A0J5PU20/75-165   OS Aspergillus fumigatus Z5
#=GS A0A0J5PU20/75-165   DE PHD transcription factor (Rum1), putative
#=GS A0A0J5PU20/75-165   DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GF SQ 29
T1FW30/6-97                 --------KKFIPPPEAPVFEPSWEDFCDPLAYIDKIRPIGEKYGVCKIRPPPSWQPPFAVDVDTFRFTPRIQKLNELEAL---SRVKLNFIHLLTKFWTLQI----------
A0A1U8QR91/70-149           -----------HGLQEAPTFRPTEEEFRDPEAYIRKIAPEGKKYGICRIIPPENWQPTFAIDTEKFHFKTRRQELNSVEGG---MPPRSALLAA-------------------
Q5AU19/70-149               -----------HGLQEAPTFRPTEEEFRDPEAYIRKIAPEGKKYGICRIIPPENWQPTFAIDTEKFHFKTRRQELNSVEGG---MPPRSALLAA-------------------
A9UXX0/2-108                --AGRNQPPRFTAPPETRVYRPTLTQFVDPMRYIESIRAEAETYGVVKIVPPTGWNMEFALSDDSFHFQPRVQVLSELEGQ---SRARNDFLERLEEYWRLQGSKLRDAPV-I
X1WCG3/2-85                 ---THSRPNEFIPPPECPVFEPSWEEFADPFGFINKIRPIAENTGICKIRPPPGWQPPFACDVDRLHFTPRIQRLNELEAQ---TRVKLN-----------------------
Q5KHN4/171-264              ----------LFGLGDCPTFYPTPEEFKDPMAYIGSIAQQGKKYGMCKIVPPEGWHMPFRLETETFRFKARLQRLNQLEAA---SRAKLNFLEQLSMYHMQQG----DSKI--
K9J7Q2/4-92                 GMATY---IEFVPPPECPVFEPSWEEFSDPLSFIGRIRPIAEKTGICKIRPPKDWQPPFACDVKSFCFTPRVQRLNELEGSIVCSRTVADIT---------------------
Q5Y235/171-264              ----------LFGLEDCPTFYPTPEEFKDPMAYIESISQQGKKYGMCKVVPPEGWHMPFRLETETFRFKARLQRLNQLEAA---SRAKLNFLEQLSMYHMQQG----DSKI--
E6RBS2/171-264              ----------LFGLEDCPTFYPTPEEFKDPMAYIESISQQGKKYGMCKVVPPEGWHMPFRLETETFRFKARLQRLNQLEAA---SRAKLNFLEQLSMYHMQQG----DSKI--
A0A0D0YSA7/171-264          ----------LFGLEDCPTFYPTPEEFKDPMAYIESISQQGKKYGMCKVVPPEGWHMPFRLETETFRFKARLQRLNQLEAA---SRAKLNFLEQLSMYHMQQG----DSKI--
A0A397GLQ6/75-165           ----------------APTFRPTEEEFKDPLEYIRKIAPEGKKYGICRIIPPENWQPPFAIDTERFHFKTRRQELNSVEGG---MPPRSATFAAGATP---QPSSDPDSGTRA
A0A0K8L985/75-165           ----------------APTFRPTEEEFKDPLEYIRKIAPEGKKYGICRIIPPENWQPPFAIDTERFHFKTRRQELNSVEGG---MPPRSATFAAGATP---QPSSDPDSGTRA
Q4WEL5/75-165               ----------------APTFRPTEEEFKDPLEYIRKIAPEGKKYGICRIIPPENWQPPFAIDTERFHFKTRRQELNSVEGG---MPPRSATFAAGATP---QPSSDPDSGTRA
A0A0S7E2H6/75-165           ----------------APTFRPTEEEFKDPLEYIRKIAPEGKKYGICRIIPPENWQPPFAIDTERFHFKTRRQELNSVEGG---MPPRSATFAAGATP---QPSSDPDSGTRA
A0A3A2ZF67/75-161           ----------------APTFRPTEEEFKDPVEYIRKIAPEGKKYGICRVIPPENWQPPFAIDTERFHFKTRRQELNSVEGG---MPPRTANFATGGTP---QTSSDPDS----
A0A319DFK6/70-153           -----------HGLQEAPTFRPTEEEFRDPEAYIRKIAPEGKKYGICRIIPPENWQPTFAIDTERFHFKTRRQELNSVEGG---MPPRSAKLAAGGAP---------------
A0A317W650/70-153           -----------HGLKEAPTFRPTEEEFRDPEAYIRKIAPEGKKYGICRIIPPENWQPTFAIDTERFHFKTRRQELNSVEGG---MPPRSAKLAAGGAP---------------
Q8J0Z1/171-264              ----------LFGLEDCPTFYPTPEQFKDPMAYIDSIAQQGKKYGMCKVVPPEGWHMPFRLETETFRFKARLQRLNQLEAA---SRAKLNFLEQLSMYHMQQG----DSKI--
Q8J0W7/171-264              ----------LFGLGDCPTFYPTPEEFKDPMAYIGSIAQQGKKYGMCKIVPPEGWHMPFRLETETFRFKARLQRLNQLEAA---SRAKLNFLEQLSMYHMQQG----DSKI--
F5HBY7/171-264              ----------LFGLGDCPTFYPTPEEFKDPMAYIGSIAQQGKKYGMCKIVPPEGWHMPFRLETETFRFKARLQRLNQLEAA---SRAKLNFLEQLSMYHMQQG----DSKI--
A0A0D0Y0Q9/171-264          ----------LFGLEDCPTFYPTPEEFKDPMAYIESISQQGKKYGMCKVVPPEGWHMPFRLETETFRFKARLQRLNQLEAA---SRAKLNFLEQLSMYHMQQG----DSKI--
A0A0D0TKV7/171-264          ----------LFGLEDCPTFYPTPEEFKDPMAYIDSISQQGKKYGMCKVVPPEGWHMPFRLETETFRFKARLQRLNQLEAA---SRAKLNFLEQLSMYHMQQG----DSKI--
F6KJQ8/171-264              ----------LFGLEDCPTFYPTPEEFKDPMAYIDSISQQGKKYGMCKVVPPEGWHMPFRLETETFRFKARLQRLNQLEAA---SRAKLNFLEQLSMYHMQQG----DSKI--
J9VMK9/171-264              ----------LFGLEDCPTFYPTPEQFKDPMAYIDSIAQQGKKYGMCKVVPPEGWHMPFRLETETFRFKARLQRLNQLEAA---SRAKLNFLEQLSMYHMQQG----DSKI--
A0A225Z4R9/171-264          ----------LFGLEDCPTFYPTPEQFKDPMAYIDSIAQQGKKYGMCKVVPPEGWHMPFRLETETFRFKARLQRLNQLEAA---SRAKLNFLEQLSMYHMQQG----DSKI--
Q5Y259/171-264              ----------LFGLEDCPTFYPTPEEFKDPMAYIDSIAQHGKKYGICKIVPPEGWHMPFRLETEIFRFKARLQRLNQLEAA---SRAKLNFLEQLSMYHMQQG----DSKI--
B0Y2T9/75-165               ----------------APTFRPTEEEFKDPLEYIRKIAPEGKKYGICRIIPPENWQPPFAIDTERFHFKTRRQELNSVEGG---MPPRSATFAAGATP---QPSSDPDSGTRA
A0A229Y765/75-165           ----------------APTFRPTEEEFKDPLEYIRKIAPEGKKYGICRIIPPENWQPPFAIDTERFHFKTRRQELNSVEGG---MPPRSATFAAGATP---QPSSDPDSGTRA
A0A0J5PU20/75-165           ----------------APTFRPTEEEFKDPLEYIRKIAPEGKKYGICRIIPPENWQPPFAIDTERFHFKTRRQELNSVEGG---MPPRSATFAAGATP---QPSSDPDSGTRA
#=GC scorecons              00000000002233235868497387959945894595557777968775996596569556674869659495984696400055564535433333111420000432200
#=GC scorecons_70           _________________***_**_***_**__**__*___*********_***_**_**__***_*_**_*_*_**_**________*_________________________
#=GC scorecons_80           _________________*_*_**_***_**__**__*___*_***_*_*_**__*___*____*_*_*__*_*_**__*__________________________________
#=GC scorecons_90           _________________*_*_*__*_*_**__**__*_______*_*___**__*___*______*_*__*_*_**__*__________________________________
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