# STOCKHOLM 1.0
#=GF ID 2.60.120.590/FF/000018
#=GF DE ALKylated DNA repair protein AlkB homolog
#=GF AC 2.60.120.590/FF/000018
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 82.878
#=GS Q9U3P9/124-325      AC Q9U3P9
#=GS Q9U3P9/124-325      OS Caenorhabditis elegans
#=GS Q9U3P9/124-325      DE ALKylated DNA repair protein AlkB homolog
#=GS Q9U3P9/124-325      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q9U3P9/124-325      DR GO; GO:0005737; 
#=GS Q8RWY1/121-333      AC Q8RWY1
#=GS Q8RWY1/121-333      OS Arabidopsis thaliana
#=GS Q8RWY1/121-333      DE Alkylated DNA repair protein ALKBH8 homolog
#=GS Q8RWY1/121-333      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q8RWY1/121-333      DR GO; GO:0002098; 
#=GS F4I9F8/119-331      AC F4I9F8
#=GS F4I9F8/119-331      OS Arabidopsis thaliana
#=GS F4I9F8/119-331      DE RNA-binding (RRM/RBD/RNP motifs) family protein
#=GS F4I9F8/119-331      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS D7TFE1/687-899      AC D7TFE1
#=GS D7TFE1/687-899      OS Vitis vinifera
#=GS D7TFE1/687-899      DE Uncharacterized protein
#=GS D7TFE1/687-899      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS A5B3V2/768-978      AC A5B3V2
#=GS A5B3V2/768-978      OS Vitis vinifera
#=GS A5B3V2/768-978      DE Uncharacterized protein
#=GS A5B3V2/768-978      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS F6ZTX9/130-335      AC F6ZTX9
#=GS F6ZTX9/130-335      OS Ciona intestinalis
#=GS F6ZTX9/130-335      DE Uncharacterized protein
#=GS F6ZTX9/130-335      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS C5YF73/124-332      AC C5YF73
#=GS C5YF73/124-332      OS Sorghum bicolor
#=GS C5YF73/124-332      DE Uncharacterized protein
#=GS C5YF73/124-332      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; 
#=GS R0I752/121-333      AC R0I752
#=GS R0I752/121-333      OS Capsella rubella
#=GS R0I752/121-333      DE Uncharacterized protein
#=GS R0I752/121-333      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7KKB6/119-329      AC D7KKB6
#=GS D7KKB6/119-329      OS Arabidopsis lyrata subsp. lyrata
#=GS D7KKB6/119-329      DE Oxidoreductase
#=GS D7KKB6/119-329      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS B6T2N7/124-332      AC B6T2N7
#=GS B6T2N7/124-332      OS Zea mays
#=GS B6T2N7/124-332      DE Nucleic acid binding protein
#=GS B6T2N7/124-332      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS B6IHE3/126-325      AC B6IHE3
#=GS B6IHE3/126-325      OS Caenorhabditis briggsae
#=GS B6IHE3/126-325      DE Protein CBR-ALKB-8
#=GS B6IHE3/126-325      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5UFZ6/126-326  AC A0A2G5UFZ6
#=GS A0A2G5UFZ6/126-326  OS Caenorhabditis nigoni
#=GS A0A2G5UFZ6/126-326  DE Uncharacterized protein
#=GS A0A2G5UFZ6/126-326  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GF SQ 12
Q9U3P9/124-325              VENLPEATKCEDFRPANLKIIEEYVSSDLEKELVDLV-------TNHPSVQSLKHRAVVHFGHVFDYSTNSASEWKEADP-IPPVINSLIDRLISDKYITE-----RPDQVTANVYESGHGIPSHYDTHSAFDDPIVSISLLSDVVMEF---------------------KDGANSARIAPVLLKARSLCLIQGESRYRWKHGIVNRKYDVDPRTNRVVPRQTRVSLTLRKIRRKP----
Q8RWY1/121-333              ---------SELNIP-GLFLLPDFVTVAEEQQLLAAV--------DARHWIGLAKRRVQHYGYEFCYGTRNVDTKKRLGE-LPSFVSPILERIYLFPNFDNGSASLNLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSLSLAGPCIMEFRRYSVSTW-KAST----TDAEKSGDSSCIKKALYLPPRSMLLLSGEARYAWNHYIPHHKIDKV-KDKVIRRSSRRVSFTLRKVRNHPC--S
F4I9F8/119-331              ---------SELNIP-GLFLLPDFVTVAEEQQLLAAV--------DARHWIGLAKRRVQHYGYEFCYGTRNVDTKKRLGE-LPSFVSPILERIYLFPNFDNGSASLNLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSLSLAGPCIMEFRRYSVSTW-KAST----TDAEKSGDSSCIKKALYLPPRSMLLLSGEARYAWNHYIPHHKIDKV-KDKVIRRSSRRVSFTLRKVRNHPC--S
D7TFE1/687-899              -----------LNIP-GIYLLHDFVSAKEEEELLAAV--------DKMSWKSLSKRRVQHYGYEFCYETRNVNTKQYLGK-LPSFVSAIVERISSFPNLES-AADIVLDQLTVNEYPPGVGLSPHIDTHSAFEGFIFSLSLAGPCIMDFRRYTEGVWPKSASSSDMSVEYPDKSSSFLRRAIYLPPRSMLLLSGEARYAWHHYIPHHKIDMV-KDSVIRRGPRRVSFTFRKVRTGP----
A5B3V2/768-978              -------------IP-GIYLLHDFVSAKEEEELLAAV--------DKMSWKSLSKRRVQHYGYEFCYETRNVNTKQYLGK-LPSFVSAIVERISSFPNLES-AADIVLDQLTVNEYPPGVGLSPHIDTHSAFEGFIFSLSLAGPCIMDFRRYTEGVWPKSASSSDMSVEYPDKSSSFLRRAIYLPPRSMLLLSGEARYAWHHYIPHHKIDMV-KDSVIRRGPRRVSFTFRKSDIRQ----
F6ZTX9/130-335              ------FAEEKSDLPNGLIKIENFLNKEEEQALINCIQHDISILSNDHVSEKLKHRTVLHYGYKFRYGTNDVDINNPISEGLPNYIENLLDRIMATGYLPS-----RPDQLTINMYEPGDGIPPHTDNTRSFDGVLSTVSLGSHTVMNFS--------------------KEGAE---RIDVCVEPRTLFLFTGESRYEWRHGIQQRKFDILDQGKKITTRTIRYSLTFRTVVKDAGKSG
C5YF73/124-332              -------------IP-GIYMVQEFVTAAEEQELLSAV--------DSKTWKRLAKRRVQHYGYEFLYETRNVDSKQFLGE-LPTFVSTVLEKIASFPGVKD-CTTSLVDQLTVNEYPCGVGLSPHIDTHSAFEEMIFSLSLAGPCIMEFRKYTKGSW-RAPSVVNGVDEDSSQEPGCIRKAIFLPPRSMLLMSGEGRYAWHHYIPHHKIDAV-GGQVIKRNSRRVSFTFRKVRMG-----
R0I752/121-333              ---------SELNIP-GLFLIPEFVSVEEEQQLLAAV--------DARPWIGLAKRRVQHYGYEFCYGTRNVDTKKRLGE-LPSFVSPILERISLFPNHDIDPSSLDLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSLSLAGPCIMEFRRYSVSTW-KAST----ADAEKLGDSSCIKKALYLPPRSMLLLSGEARYAWNHYIPHHKIDKV-KDKVIRRSPRRVSFTIRKVRNHPC--R
D7KKB6/119-329              ---------SELNIP-GLFLLPDFVSVEEEQQLLAAV--------DARPWIGLAKRRVQHYGYEFCYGTRNVDTKKRLGE-LPSFVSPILERMSLFPNFDINSASLDLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSLSLAGPCIMEFRRYSVSTW-KASS----ADAEKSGDSSCIRKALYLPPRSMLLLSGEARYAWNHYIPHHKVGKV-KEKAIRRSSRRVSFTLRKVRNLP----
B6T2N7/124-332              -------------IP-GIYMVQEFVTAAEEQELLSAV--------DSKTWKRLAKRRVQHYGYEFLYETRNVDSKQFLGE-LPTFVSTVLEKIASFPGVKD-CATRLVDQLTVNEYPCGVGLSPHIDTHSAFEEMIFSLSLAGTCIMEFRKYTKGTW-RAPSVVDGVDEDSSQEPECIRKAIFLPPRSMLLMSGEGRYAWHHYIPHHKIDAV-GGQVIKRNSRRVSFTFRKVRMG-----
B6IHE3/126-325              --NLPEAKKCEMFRPANLKLVEDYVSENLENDLVKLL-------TNHPKVQSLKHRAVVHFGHVFDYNTNSASEWKEAEP-IPPVIEALIDRLISDKYITE-----RSDQITANVYEPGHGIPSHYDTHSAFDDPIISISLLSDVVMEF---------------------KDGANSARIAPVLLKARSLCLIEGESRYRWKHGIVNRKYDVDPRTNRVVPRKTRVSLTLRKIRRKP----
A0A2G5UFZ6/126-326          --NLPEAKKCEMFRPADLKLVEDYVSENLENDLVELL-------TNHSKVQSLKHRAVVHFGHVFDYNTNSASEWKEAEP-IPPVIEALVDRLISDKYITE-----RPDQITANVYEPGHGIPSHYDTHSAFDDPIISISLLSDVVMEF---------------------KDGANSARIAPVLLKARSLCLIQGESRYRWKHGIVNRKYDVDPRTNRVVPRKTRVSLTLRKIRQKPC---
#=GC scorecons              000000000232249066355467753459549644600000000633343494695949797493949556544525540694575455776353444330121134996959495594966694977779753747699464479693221111202211000011115454453344554746976495499599494949456948340544474543497969597663340000
#=GC scorecons_70           ______________*__*____***____*__*___*________*______*__*_*_****_*_*_*__*_________**__*____***_______________****_*_*__*_**_**_*******__*_*_**____****__________________________________*_****_*__**_**_*_*_*__**_*_______*_____*****_****_______
#=GC scorecons_80           ______________*________**____*__*___________________*__*_*_****_*_*_*_____________*________*________________**_*_*_*__*_*___*_******___*_*_**_____*_*__________________________________*__**__*__**_**_*_*_*___*_*_______*_____*_*_*_**_________
#=GC scorecons_90           ______________*______________*__*___________________*__*_*_*_*__*_*_*_____________*_________________________**_*_*_*__*_*___*_*____*_______**_____*_*_____________________________________*___*__**_**_*_*_*___*_*_____________*_*_*_*__________
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