# STOCKHOLM 1.0
#=GF ID 2.60.120.260/FF/000173
#=GF DE Netrin 4
#=GF AC 2.60.120.260/FF/000173
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 77.397
#=GS Q32SK8/12-199      AC Q32SK8
#=GS Q32SK8/12-199      OS Danio rerio
#=GS Q32SK8/12-199      DE Netrin 4
#=GS Q32SK8/12-199      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS Q32SK8/12-199      DR GO; GO:0001944; GO:0048514; 
#=GS A0A0R4IFE9/65-296  AC A0A0R4IFE9
#=GS A0A0R4IFE9/65-296  OS Danio rerio
#=GS A0A0R4IFE9/65-296  DE Netrin 4
#=GS A0A0R4IFE9/65-296  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS A0A0R4IFE9/65-296  DR GO; GO:0048514; 
#=GS F6RZH2/16-257      AC F6RZH2
#=GS F6RZH2/16-257      OS Ciona intestinalis
#=GS F6RZH2/16-257      DE Uncharacterized protein
#=GS F6RZH2/16-257      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS C3Z940/5-250       AC C3Z940
#=GS C3Z940/5-250       OS Branchiostoma floridae
#=GS C3Z940/5-250       DE Uncharacterized protein
#=GS C3Z940/5-250       DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS H2LGM1/36-287      AC H2LGM1
#=GS H2LGM1/36-287      OS Oryzias latipes
#=GS H2LGM1/36-287      DE Uncharacterized protein
#=GS H2LGM1/36-287      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A0R4IHS1/19-250  AC A0A0R4IHS1
#=GS A0A0R4IHS1/19-250  OS Danio rerio
#=GS A0A0R4IHS1/19-250  DE Netrin 4
#=GS A0A0R4IHS1/19-250  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS A0A0R4IHS1/19-250  DR GO; GO:0048514; 
#=GS B3DJR9/19-250      AC B3DJR9
#=GS B3DJR9/19-250      OS Danio rerio
#=GS B3DJR9/19-250      DE Ntn4 protein
#=GS B3DJR9/19-250      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS B3DJR9/19-250      DR GO; GO:0048514; 
#=GS A0A0B5JSB7/16-247  AC A0A0B5JSB7
#=GS A0A0B5JSB7/16-247  OS Danio rerio
#=GS A0A0B5JSB7/16-247  DE Ntn4
#=GS A0A0B5JSB7/16-247  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS A0A0B5JSB7/16-247  DR GO; GO:0048514; 
#=GS A0A1W2WCP7/17-267  AC A0A1W2WCP7
#=GS A0A1W2WCP7/17-267  OS Ciona intestinalis
#=GS A0A1W2WCP7/17-267  DE netrin-4
#=GS A0A1W2WCP7/17-267  DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS A0A3P9L059/36-287  AC A0A3P9L059
#=GS A0A3P9L059/36-287  OS Oryzias latipes
#=GS A0A3P9L059/36-287  DE Uncharacterized protein
#=GS A0A3P9L059/36-287  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GF SQ 10
Q32SK8/12-199              ALVMSVPHHACSGCVNRVCNPRMGNLAVGRPIQTISQCG-STSPEQFCMY-------RPDSCV-LDCEICDASVSQHAHSPSSMTDSPFKQPLTWWQSAPGTAIETLQLDLEVEFYFTHLIIIFMSPRPAAMAIDRSRDFGQTWSLLMLFSHNCSEVSSLED-------GQRCTAKYSSAEPCTNGEV------------------------------------PHSCPCPIADANAA----------------TP---------------
A0A0R4IFE9/65-296          ----SVPHHACSGCVNRVCNPRMGNLAVGRPIQTVSQCG-STSPEQFCMY-------RPDSCV-LDCEICDASVSQHAHSPSSMTDSPFKQPLTWWQSAPGTAIETLQLDLEVEFYFTHLIIIFMSPRPAAMAIDRSRDFGQTWSLLMLFSHNCSEVSSLED-------GQRCTAKYSSAEPCTNGEVIYRAL--SPYERL-DPYSTDARSLLGVTNVRIRLLQPHSCPCPIADANAA----------------TPRYAISDLILKGGCLC
F6RZH2/16-257              ---LTFKINVGQRCGRHSCHGDVGNLAAGRSVSVTSTCGLGRKGEIYCDP-------GTDSCTAPICRRCGTG----DHPGSHMLDSPFTGSHTWWQSANNADDVTIQFDLQTSFYFTHLIMLFRSPRPGAMTLERSVDFGQTWQIYQRFASNCSEEFGMDDD--VDVISAACTSRYSSPWPCDGGEVIHRVM--NPAHPIDDPYNDEARHLLKITNLRIRMWNPQLCTGCTNITSDSLVM-----------SIFPPFSVYDLIIRGTCYC
C3Z940/5-250               ---IVSNVAYRSRCDRHSCHPPPGNLAIGRLLRTSTTCG-ENGGEHFCSIS------SSSSCSKVKCYKCHSGRKNRAHPPWHMTDTGAGHRGTWWQSKNNGGAETIQLDLESRFYFTHLVMVFRTPRPAAMVLERSSDYGKTWRTYSYFARNCTETFGLREG--VNPEGSLCTSRYSAPDPCTRGEVIFRVLPVGSNHSISDPYSLHAQDLMTITNIRMRLLKRQSCSCPTEEVQEKPYK-------------FAHFAVYNLIISGSCFC
H2LGM1/36-287              S--EEKDPITKRACFDRACNPRMGNLAHGRLLRTRSECG-SNTSEPFCFFTQTSAPRHGESCSPAKCSLCGSSIPGHAHPPSAMSDSSFLFPDTWWQSDGEIEEETLQLDLETKFLFTHLILVFRSPRPAAMVLERSQDHGRTWKALRYYAWSCEEVFGVAEGASVTESGATCTSKYSGAFPCTRGEVIYRGL--SPWSSV-DPYGPVAQDQLMITNLRVKLLQRQQCPCLTKSSEVPVHP-------------PDHYAIYDFIVKGSCLC
A0A0R4IHS1/19-250          ----SVPHHACSGCVNRVCNPRMGNLAVGRPIQTISQCG-STSPEQFCMY-------RPDSCV-LDCEICDALVSQHAHSPSSMTDSPFKQPLTWWQSAPGTAIETLQLDLEVEFYFTHLIIIFMSPRPAVMAIDRSRDFGQTWSLLMLFSHNCSEVSSLED-------GQRCTAKYSSAEPCTNGEVIYRAL--SPYERL-DPYSTDARSLLGVTNVRIRLLQPHSCPCPIADANAA----------------TPRYAISDLILKGGCLC
B3DJR9/19-250              ----SVPHHACSGCVNRVCNPRMGNLAVGRPIQTISQCG-STSPEQFCMY-------RPDSCV-LDCEICDALVSQHAHSPSSMTDSPFKQPLTWWQSAPGTAIETLQLDLEVEFYFTHLIIIFMSPRPAVMAIDRSRDFGQTWSLLMLFSHNCSEVSSLED-------GQRCTAKYSSAEPCTNGEVIYRAL--SPYERL-DPYSTDARSLLGVTNVRIRLLQPHSCPCPIADANAA----------------TPRYAISDLILKGGCLC
A0A0B5JSB7/16-247          ----SVPHHACSGCVNRVCNPRMGNLAVGRPIQTISQCG-STSPEQFCMY-------RPDSCV-LDCEICDASVSQHAHSPSSMTDSPFKQPLTWWQSAPGTAIETLQLDLEVEFYFTHLIIIFMSPRPAAMAIDRSRDFGQTWSLLMLFSHNCSEVSSLED-------GQRCTAKYSSAEPCTNGEVIYRAL--SPYERL-DPYSTDARSLLGVTNVRIRLLQPHSCPCPIADANAA----------------TPRYAISDLILKGGCLC
A0A1W2WCP7/17-267          -----VLRSLSQRCGRHSCHGDVGNLAAGRSVSVTSTCGLGRKGEIYCDP-------GTDSCTAPICRRCGTG----DHPGSHMLDSPFTGSHTWWQSANNADDVTIQFDLQTSFYFTHLIMLFRSPRPGAMTLERSVDFGQTWQIYQRFASNCSEEFGMDDD--VDVISAACTSRYSSPWPCDGGEVIHRVM--NPAHPIDDPYNDEARHLLKITNLRIRMWNPQLCTGCTNITSDSLVMEDRSILPEDVGSIFPPFSVYDLIIRGTCYC
A0A3P9L059/36-287          S--EEKDPITKRACFDRACNPRMGNLAHGRLLRTRSECG-SNTSEPFCFFTQTSAPRHGESCSPAKCSLCGSSIPGHAHPPSAMSDSSFLFPDTWWQSDGEIEEETLQLDLETKFLFTHFILVFRSPRPAAMVLERSQDHGRTWKALRYYAWSCEEVFGVAEGSSVTESGATCTSKYSGAFPCTRGEVIYRGL--SPWSSV-DPYGPVAQDQLMITNLRVKLLQRQQCPCLTKSSEVPVHP-------------PDHYAIYDFIVKGSCLC
#=GC scorecons             0000333333344934649665599994994546374990544493793400000004469941439339554222469667494975733539999954444369697997449699978559579996795679939696994453376369595565471002111643996799562996499965635004523340666322643462566465554456495646434444110000000000000045355545564463646
#=GC scorecons_70          _____________*__*_*_*__****_**___*_*_**_____*_**___________***____*__*_______**_**_*_**_*____*****_______*******__*******__*_*******_****_******_____*__**_*_____*_______*__**_***___***_****_*___________***___*______**_*______*_*_*_________________________________*__*_*_*
#=GC scorecons_80          _____________*____*____****_**_____*_**_____*_**____________**____*__*________*____*_**______*****_______*_*_**___*_*****__*_****_**___**_*_*_**_____*___*_*________________**__**___**__***_______________________________________*___________________________________________
#=GC scorecons_90          _____________*____*____****_**_______**_____*__*____________**____*__*________*____*_*_______*****_______*_*_**___*_***_*__*__***__*___**_*_*_**_________*_*________________**__**___**__***_______________________________________*___________________________________________
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