# STOCKHOLM 1.0 #=GF ID 2.60.120.200/FF/000303 #=GF DE Outer capsid protein VP4 #=GF AC 2.60.120.200/FF/000303 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 52.805 #=GS 2dwrA01/2-160 AC P11193 #=GS 2dwrA01/2-160 OS Human rotavirus strain WA #=GS 2dwrA01/2-160 DE Outer capsid protein VP4 #=GS 2dwrA01/2-160 DR CATH; 2dwr; A:65-223; #=GS 2dwrA01/2-160 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GS 5jdbF01/2-160 AC E2EA82 #=GS 5jdbF01/2-160 OS Rotavirus A #=GS 5jdbF01/2-160 DE Outer capsid protein VP4 #=GS 5jdbF01/2-160 DR CATH; 5jdb; F:2-160; #=GS 5jdbF01/2-160 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GS 5jdbE01/2-160 AC E2EA82 #=GS 5jdbE01/2-160 OS Rotavirus A #=GS 5jdbE01/2-160 DE Outer capsid protein VP4 #=GS 5jdbE01/2-160 DR CATH; 5jdb; E:2-160; #=GS 5jdbE01/2-160 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GS 5jdbD01/2-160 AC E2EA82 #=GS 5jdbD01/2-160 OS Rotavirus A #=GS 5jdbD01/2-160 DE Outer capsid protein VP4 #=GS 5jdbD01/2-160 DR CATH; 5jdb; D:2-160; #=GS 5jdbD01/2-160 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GS 5jdbC01/2-160 AC E2EA82 #=GS 5jdbC01/2-160 OS Rotavirus A #=GS 5jdbC01/2-160 DE Outer capsid protein VP4 #=GS 5jdbC01/2-160 DR CATH; 5jdb; C:2-160; #=GS 5jdbC01/2-160 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GS 5jdbB01/2-160 AC E2EA82 #=GS 5jdbB01/2-160 OS Rotavirus A #=GS 5jdbB01/2-160 DE Outer capsid protein VP4 #=GS 5jdbB01/2-160 DR CATH; 5jdb; B:2-160; #=GS 5jdbB01/2-160 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GS 5jdbA01/2-160 AC E2EA82 #=GS 5jdbA01/2-160 OS Rotavirus A #=GS 5jdbA01/2-160 DE Outer capsid protein VP4 #=GS 5jdbA01/2-160 DR CATH; 5jdb; A:2-160; #=GS 5jdbA01/2-160 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GS P12473/62-224 AC P12473 #=GS P12473/62-224 OS Simian rotavirus A strain RRV #=GS P12473/62-224 DE Outer capsid protein VP4 #=GS P12473/62-224 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GS C3RX20/62-224 AC C3RX20 #=GS C3RX20/62-224 OS Simian rotavirus A strain RRV #=GS C3RX20/62-224 DE Outer capsid protein VP4 #=GS C3RX20/62-224 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GS A0A168GWU0/5-167 AC A0A168GWU0 #=GS A0A168GWU0/5-167 OS Rotavirus G3 #=GS A0A168GWU0/5-167 DE Outer capsid protein VP4 #=GS A0A168GWU0/5-167 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GS B3SRR9/62-223 AC B3SRR9 #=GS B3SRR9/62-223 OS Rotavirus A human/USA/D/1974 G1P1A[8] #=GS B3SRR9/62-223 DE Outer capsid protein VP4 #=GS B3SRR9/62-223 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GS P11195/65-223 AC P11195 #=GS P11195/65-223 OS Human rotavirus strain P #=GS P11195/65-223 DE Outer capsid protein VP4 #=GS P11195/65-223 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GS P11193/65-223 AC P11193 #=GS P11193/65-223 OS Human rotavirus strain WA #=GS P11193/65-223 DE Outer capsid protein VP4 #=GS P11193/65-223 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GS P11194/62-223 AC P11194 #=GS P11194/62-223 OS Human rotavirus G4 strain VA70 #=GS P11194/62-223 DE Outer capsid protein VP4 #=GS P11194/62-223 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GS A0A0N7BR68/58-219 AC A0A0N7BR68 #=GS A0A0N7BR68/58-219 OS Rotavirus A #=GS A0A0N7BR68/58-219 DE Outer capsid protein VP4 #=GS A0A0N7BR68/58-219 DR ORG; Viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A; #=GF SQ 15 2dwrA01/2-160 ---LDGPYQPTTFTPPNDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTIFGESKQFNVSNDSN-KWKFLEMFRSSSQNEFYNRRTLTSDTRLVGILKYGGRVWTFHGETPRATTDSSSTANLNNISITIHSEFYIIPRSQESKCNEYINNGL 5jdbF01/2-160 ---LDGPYQPTTFTPPIDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTVFGENKQFNVRNDSD-KWKFLEMFRSSSQNEFYNRRTLTSDTKLVGILKYGGRIWTFHGETPRATTDSSNTANLNDISIIIHSEFYIIPRSQESKCNEYINNGL 5jdbE01/2-160 ---LDGPYQPTTFTPPIDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTVFGENKQFNVRNDSD-KWKFLEMFRSSSQNEFYNRRTLTSDTKLVGILKYGGRIWTFHGETPRATTDSSNTANLNDISIIIHSEFYIIPRSQESKCNEYINNGL 5jdbD01/2-160 ---LDGPYQPTTFTPPIDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTVFGENKQFNVRNDSD-KWKFLEMFRSSSQNEFYNRRTLTSDTKLVGILKYGGRIWTFHGETPRATTDSSNTANLNDISIIIHSEFYIIPRSQESKCNEYINNGL 5jdbC01/2-160 ---LDGPYQPTTFTPPIDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTVFGENKQFNVRNDSD-KWKFLEMFRSSSQNEFYNRRTLTSDTKLVGILKYGGRIWTFHGETPRATTDSSNTANLNDISIIIHSEFYIIPRSQESKCNEYINNGL 5jdbB01/2-160 ---LDGPYQPTTFTPPIDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTVFGENKQFNVRNDSD-KWKFLEMFRSSSQNEFYNRRTLTSDTKLVGILKYGGRIWTFHGETPRATTDSSNTANLNDISIIIHSEFYIIPRSQESKCNEYINNGL 5jdbA01/2-160 ---LDGPYQPTTFTPPIDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTVFGENKQFNVRNDSD-KWKFLEMFRSSSQNEFYNRRTLTSDTKLVGILKYGGRIWTFHGETPRATTDSSNTANLNDISIIIHSEFYIIPRSQESKCNEYINNGL P12473/62-224 EPVLDGPYQPTSFNPPVDYWMLLAPTAAGVVVEGTNNTDRWLATILVEPNVTSETRSYTLFGTQEQITIANASQTQWKFIDVVKTTQNGSYSQYGPLQSTPKLYAVMKHNGKIYTYNGETPNVTTKYYSTTNYDSVNMTAFCDFYIIPREEESTCTEYINNGL C3RX20/62-224 EPVLDGPYQPTTFNPPVDYWMLLAPTAAGVVVEGTNNTDRWLATILVEPNVTSETRSYTLFGTQEQITIANASQTQWKFIDVVKTTQNGSYSQYGPLQSTPKLYAVMKHNGKIYTYNGKTPNVTTRYYSTTNYDSVNMTAFCDFYIIPREEESTCTEYINNGL A0A168GWU0/5-167 EPVLDGPYQPTTFNPPVDYWMLLAPTAPGVVVEGTNNTDRWLATILVEPSVPSEIRSYTIFGIQEQITVANTSQTQWKFIDVVKTAQGGSYSQYGPLQSTPKLYAVMKHNGKIYTYNGETPNATTGYYSTTNYDSVNMTAFCDFYIIPRAEESTCTEYINNGL B3SRR9/62-223 EPILDGPYQSTTFTPPNGYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTIFGESKQFNVSNDSN-KWKFLEMFRSSSQNDFYNRRTLTSDTRLVGILKYGGRVWTFHGETPRATTNGSSTANLNNISITIHSEFYIIPRSQESKCNEYINNGL P11195/65-223 ---LDGPYQPTTFTPPTDYWILINSNTNGVVYESTNNSDFWTAVVAVEPHVNPVDRQYLIFGENKQFNVSNDSD-KWKFLEMFRSSSQNEFYNRRTLTSDTRLVGILKYGGRVWTFHGETPRATTDSSNTANLNNISITIHSEFYIIPRSQESKCNEYINNGL P11193/65-223 ---LDGPYQPTTFTPPNDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTIFGESKQFNVSNDSN-KWKFLEMFRSSSQNEFYNRRTLTSDTRFVGILKYGGRVWTFHGETPRATTDSSSTANLNNISITIHSEFYIIPRSQESKCNEYINNGL P11194/62-223 EPILDGPYQPTTFTPPNDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTIFGESKQFNVSNNTN-KWKFFEMFISSSQNEFYNRRTLTSDTRLVGILKYGGRVWTFHGETPRATTDSSSTANLNNISITIHSEFYIIPRSQESKCNEYINNGL A0A0N7BR68/58-219 EPILDGPYQPTTFTPPTDYWILINSNTNGVVYESTNNSDFWTAVIAVEPHVNPVDRQYNVFGENKQFNVRNDSD-KWKFLEMFRGSSQNDFYNRRTLTSDTRLVGILKYGGRIWTFHGETPRATTDSSNTANLNGISITIHSEFYIIPRSQESKCNEYINNGL #=GC scorecons 2229999998979699489969656665999496999694959575799595654959759944695674948416999676565555557555569595678467697597759769799569945569695647666556799999956995969999999 #=GC scorecons_70 ___**********_**_******___*_***_*_***_*_*_*_*_***_*____*_**_**___*__*_*_*__****_**_*______*_____*_*__**__****_***_**_****_***____***_*_*_**___*******_***_*_******* #=GC scorecons_80 ___**********_**_***_*______***_*_***_*_*_*____**_*____*_**_**___*__*_*_*___***___________*_____*_*__**____*__*_*_**_****__**____*_*___________******__**_*_******* #=GC scorecons_90 ___********_*_**_***_*______***_*_***_*_*_*____**_*____*_*__**___*____*_*___***_________________*_*___*____*__*___*__*_**__**____*_*___________******__**_*_******* //