# STOCKHOLM 1.0 #=GF ID 2.40.70.10/FF/000087 #=GF DE Gag-Pol polyprotein #=GF AC 2.40.70.10/FF/000087 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 23.464 #=GS 3nr6B00/1-132 AC A1Z651 #=GS 3nr6B00/1-132 OS Xenotropic MuLV-related virus VP62 #=GS 3nr6B00/1-132 DE Gag-Pol polyprotein #=GS 3nr6B00/1-132 DR CATH; 3nr6; B:1-125; #=GS 3nr6B00/1-132 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS 3nr6B00/1-132 DR GO; GO:0042802; #=GS 3nr6B00/1-132 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P03355/545-659 AC P03355 #=GS P03355/545-659 OS Moloney murine leukemia virus isolate Shinnick #=GS P03355/545-659 DE Gag-Pol polyprotein #=GS P03355/545-659 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P03355/545-659 DR GO; GO:0003677; GO:0006308; GO:0032993; GO:0044824; GO:0044826; #=GS P03355/545-659 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q8UN00/545-659 AC Q8UN00 #=GS Q8UN00/545-659 OS Moloney murine leukemia virus #=GS Q8UN00/545-659 DE Pr180 Gag-Pro-Pol polyprotein #=GS Q8UN00/545-659 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q8UN00/545-659 DR GO; GO:0005515; #=GS 3nr6A00/1-132 AC A1Z651 #=GS 3nr6A00/1-132 OS Xenotropic MuLV-related virus VP62 #=GS 3nr6A00/1-132 DE Gag-Pol polyprotein #=GS 3nr6A00/1-132 DR CATH; 3nr6; A:1-124; #=GS 3nr6A00/1-132 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS 3nr6A00/1-132 DR GO; GO:0042802; #=GS 3nr6A00/1-132 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS 4exhB00/18-132 AC Q9E7M1 #=GS 4exhB00/18-132 OS DG-75 Murine leukemia virus #=GS 4exhB00/18-132 DE Putative gag-pro-pol polyprotein #=GS 4exhB00/18-132 DR CATH; 4exh; B:11-122; #=GS 4exhB00/18-132 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 4exhA00/18-132 AC Q9E7M1 #=GS 4exhA00/18-132 OS DG-75 Murine leukemia virus #=GS 4exhA00/18-132 DE Putative gag-pro-pol polyprotein #=GS 4exhA00/18-132 DR CATH; 4exh; A:11-124; #=GS 4exhA00/18-132 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 3sm2B00/18-132 AC Q9E7M1 #=GS 3sm2B00/18-132 OS DG-75 Murine leukemia virus #=GS 3sm2B00/18-132 DE Putative gag-pro-pol polyprotein #=GS 3sm2B00/18-132 DR CATH; 3sm2; B:11-124; #=GS 3sm2B00/18-132 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 3sm2A00/18-132 AC Q9E7M1 #=GS 3sm2A00/18-132 OS DG-75 Murine leukemia virus #=GS 3sm2A00/18-132 DE Putative gag-pro-pol polyprotein #=GS 3sm2A00/18-132 DR CATH; 3sm2; A:11-124; #=GS 3sm2A00/18-132 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 3sm1B00/18-132 AC Q9E7M1 #=GS 3sm1B00/18-132 OS DG-75 Murine leukemia virus #=GS 3sm1B00/18-132 DE Putative gag-pro-pol polyprotein #=GS 3sm1B00/18-132 DR CATH; 3sm1; B:11-122; #=GS 3sm1B00/18-132 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 3sm1A00/18-132 AC Q9E7M1 #=GS 3sm1A00/18-132 OS DG-75 Murine leukemia virus #=GS 3sm1A00/18-132 DE Putative gag-pro-pol polyprotein #=GS 3sm1A00/18-132 DR CATH; 3sm1; A:11-123; #=GS 3sm1A00/18-132 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 3slzB00/18-132 AC Q9E7M1 #=GS 3slzB00/18-132 OS DG-75 Murine leukemia virus #=GS 3slzB00/18-132 DE Putative gag-pro-pol polyprotein #=GS 3slzB00/18-132 DR CATH; 3slz; B:11-124; #=GS 3slzB00/18-132 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 3slzA00/18-132 AC Q9E7M1 #=GS 3slzA00/18-132 OS DG-75 Murine leukemia virus #=GS 3slzA00/18-132 DE Putative gag-pro-pol polyprotein #=GS 3slzA00/18-132 DR CATH; 3slz; A:11-124; #=GS 3slzA00/18-132 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS A1Z651/543-657 AC A1Z651 #=GS A1Z651/543-657 OS Xenotropic MuLV-related virus VP62 #=GS A1Z651/543-657 DE Gag-Pol polyprotein #=GS A1Z651/543-657 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS A1Z651/543-657 DR GO; GO:0042802; #=GS A1Z651/543-657 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q2F7J3/543-657 AC Q2F7J3 #=GS Q2F7J3/543-657 OS Xenotropic MuLV-related virus VP35 #=GS Q2F7J3/543-657 DE Gag-Pol polyprotein #=GS Q2F7J3/543-657 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS Q2F7J3/543-657 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q2F7J0/543-657 AC Q2F7J0 #=GS Q2F7J0/543-657 OS Xenotropic MuLV-related virus VP42 #=GS Q2F7J0/543-657 DE Gag-Pol polyprotein #=GS Q2F7J0/543-657 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS Q2F7J0/543-657 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS D0UFA3/543-657 AC D0UFA3 #=GS D0UFA3/543-657 OS Xenotropic MuLV-related virus #=GS D0UFA3/543-657 DE Putative gag-pro-pol polyprotein #=GS D0UFA3/543-657 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS D0UFA3/543-657 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P03356/544-658 AC P03356 #=GS P03356/544-658 OS AKR (endogenous) murine leukemia virus #=GS P03356/544-658 DE Gag-Pol polyprotein #=GS P03356/544-658 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P03356/544-658 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P26809/545-659 AC P26809 #=GS P26809/545-659 OS Friend murine leukemia virus (ISOLATE FB29) #=GS P26809/545-659 DE Gag-Pol polyprotein #=GS P26809/545-659 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P26809/545-659 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q7SVK7/544-658 AC Q7SVK7 #=GS Q7SVK7/544-658 OS Murine leukemia virus (strain BM5 ECO) #=GS Q7SVK7/544-658 DE Gag-pol polyprotein #=GS Q7SVK7/544-658 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q7SVK7/544-658 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P26810/546-660 AC P26810 #=GS P26810/546-660 OS Friend murine leukemia virus (ISOLATE 57) #=GS P26810/546-660 DE Gag-Pol polyprotein #=GS P26810/546-660 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P26810/546-660 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P11227/544-658 AC P11227 #=GS P11227/544-658 OS Radiation murine leukemia virus #=GS P11227/544-658 DE Gag-Pol polyprotein #=GS P11227/544-658 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P11227/544-658 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P08361/543-657 AC P08361 #=GS P08361/543-657 OS Cas-Br-E murine leukemia virus #=GS P08361/543-657 DE Gag-Pol polyprotein #=GS P08361/543-657 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P08361/543-657 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P26808/545-659 AC P26808 #=GS P26808/545-659 OS Friend murine leukemia virus (ISOLATE PVC-211) #=GS P26808/545-659 DE Gag-Pol polyprotein #=GS P26808/545-659 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P26808/545-659 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q9E7M1/543-657 AC Q9E7M1 #=GS Q9E7M1/543-657 OS DG-75 Murine leukemia virus #=GS Q9E7M1/543-657 DE Putative gag-pro-pol polyprotein #=GS Q9E7M1/543-657 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS A0A126QCH6/547-661 AC A0A126QCH6 #=GS A0A126QCH6/547-661 OS Murine leukemia virus #=GS A0A126QCH6/547-661 DE Putative gag-pro-pol polyprotein #=GS A0A126QCH6/547-661 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q5PYI3/540-654 AC Q5PYI3 #=GS Q5PYI3/540-654 OS Murine leukemia virus #=GS Q5PYI3/540-654 DE Gag-pol polyprotein #=GS Q5PYI3/540-654 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q90RL4/6-120 AC Q90RL4 #=GS Q90RL4/6-120 OS Murine leukemia virus #=GS Q90RL4/6-120 DE Pol protein #=GS Q90RL4/6-120 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q60FS6/6-120 AC Q60FS6 #=GS Q60FS6/6-120 OS Murine leukemia virus #=GS Q60FS6/6-120 DE POL polyprotein #=GS Q60FS6/6-120 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q83371/235-349 AC Q83371 #=GS Q83371/235-349 OS Moloney murine leukemia virus #=GS Q83371/235-349 DE Reverse transcriptase #=GS Q83371/235-349 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GF SQ 29 3nr6B00/1-132 MHHHHHHTLGDQGGQGQEPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL P03355/545-659 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVMGPMGQPLQVL Q8UN00/545-659 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGSLSGKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVMGPMGQPLQVL 3nr6A00/1-132 MHHHHHHTLGDQGGQGQEPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL 4exhB00/18-132 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL 4exhA00/18-132 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL 3sm2B00/18-132 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL 3sm2A00/18-132 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL 3sm1B00/18-132 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL 3sm1A00/18-132 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL 3slzB00/18-132 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL 3slzA00/18-132 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL A1Z651/543-657 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL Q2F7J3/543-657 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL Q2F7J0/543-657 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL D0UFA3/543-657 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL P03356/544-658 -----------------EPPPEPRITLTVGGQPVTFLVDTGAQHSVLTQNPGPLSDRSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPKGQPLQVL P26809/545-659 -----------------EPPPEPRITLRVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRRVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL Q7SVK7/544-658 -----------------EPPPEPRITLTVGGQPVTFLVDTGAQHSVLTQNPGPLSDRSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPKGQPLQVL P26810/546-660 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRRVHLATGKVTHSFLHVPDCPYPLLGRHLLTKLKAQIHFEGSGAQVVGPMGQPLQVL P11227/544-658 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDRSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFKGSGAQIVGPMGQPLQVL P08361/543-657 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLNAQIHFEGSGAQVVGPRGQPLQVL P26808/545-659 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRRVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL Q9E7M1/543-657 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL A0A126QCH6/547-661 -----------------EPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGKPLQVL Q5PYI3/540-654 -----------------EPPPEPRITLKVGGQQVTFLVDTGAQHSVLTQDPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGRVSHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQITGPAGQPLQVL Q90RL4/6-120 -----------------EPPPEPRITLTVGGQPVTFLVDTGAQHSVLTQNPGPLSDRSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKVQIHFEGSGAQVVGPKGQPLQVL Q60FS6/6-120 -----------------DPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL Q83371/235-349 -----------------DPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKRYRWTTDRKVHLATGKVTHSFLHVPDCPYPLLGRDLLTKLKAQIHFEGSGAQVVGPMGQPLQVL #=GC scorecons 000000000000000008999999999799998999999999999999989989988999999999999999999989999998989999999999999999899999889999899999879969899999 #=GC scorecons_70 _________________******************************************************************************************************************* #=GC scorecons_80 _________________***********************************************************************************************************_******* #=GC scorecons_90 _________________**********_****************************_****************************************************************_**_******* //