# STOCKHOLM 1.0 #=GF ID 2.40.50.140/FF/000386 #=GF DE rRNA biogenesis protein RRP5 #=GF AC 2.40.50.140/FF/000386 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 81.348 #=GS Q05022/108-153_199-243 AC Q05022 #=GS Q05022/108-153_199-243 OS Saccharomyces cerevisiae S288C #=GS Q05022/108-153_199-243 DE rRNA biogenesis protein RRP5 #=GS Q05022/108-153_199-243 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS Q05022/108-153_199-243 DR GO; GO:0000447; GO:0000464; GO:0000472; GO:0000480; GO:0003729; GO:0005515; GO:0005654; GO:0005730; GO:0006364; GO:0008266; GO:0030490; GO:0030515; GO:0030686; GO:0031167; GO:0032040; GO:0034463; GO:0034511; GO:0034512; GO:0034513; GO:0042134; #=GS B3SB29/62-175 AC B3SB29 #=GS B3SB29/62-175 OS Trichoplax adhaerens #=GS B3SB29/62-175 DE Uncharacterized protein #=GS B3SB29/62-175 DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; #=GS H2MCJ8/65-162 AC H2MCJ8 #=GS H2MCJ8/65-162 OS Oryzias latipes #=GS H2MCJ8/65-162 DE Programmed cell death 11 #=GS H2MCJ8/65-162 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GS Q752K8/102-147_183-227 AC Q752K8 #=GS Q752K8/102-147_183-227 OS Eremothecium gossypii ATCC 10895 #=GS Q752K8/102-147_183-227 DE AFR566Cp #=GS Q752K8/102-147_183-227 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; #=GS R9XAJ8/101-147_183-227 AC R9XAJ8 #=GS R9XAJ8/101-147_183-227 OS Saccharomycetaceae sp. 'Ashbya aceri' #=GS R9XAJ8/101-147_183-227 DE AaceriAFR566Cp #=GS R9XAJ8/101-147_183-227 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; #=GS H0GLD4/108-153_199-243 AC H0GLD4 #=GS H0GLD4/108-153_199-243 OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 #=GS H0GLD4/108-153_199-243 DE Rrp5p #=GS H0GLD4/108-153_199-243 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; #=GS A0A0L8RDN0/110-155_201-244 AC A0A0L8RDN0 #=GS A0A0L8RDN0/110-155_201-244 OS Saccharomyces eubayanus #=GS A0A0L8RDN0/110-155_201-244 DE RRP5-like protein #=GS A0A0L8RDN0/110-155_201-244 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; #=GS A0A0L8VJA9/108-153_199-243 AC A0A0L8VJA9 #=GS A0A0L8VJA9/108-153_199-243 OS Saccharomyces sp. 'boulardii' #=GS A0A0L8VJA9/108-153_199-243 DE RRP5p RNA binding protein involved in synthesis of both 18S and 5.8S rRNAs #=GS A0A0L8VJA9/108-153_199-243 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; #=GS G2WKT6/108-153_199-243 AC G2WKT6 #=GS G2WKT6/108-153_199-243 OS Saccharomyces cerevisiae Kyokai no. 7 #=GS G2WKT6/108-153_199-243 DE K7_Rrp5p #=GS G2WKT6/108-153_199-243 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C8ZF93/108-153_199-243 AC C8ZF93 #=GS C8ZF93/108-153_199-243 OS Saccharomyces cerevisiae EC1118 #=GS C8ZF93/108-153_199-243 DE Rrp5p #=GS C8ZF93/108-153_199-243 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS A6ZMU1/108-153_199-243 AC A6ZMU1 #=GS A6ZMU1/108-153_199-243 OS Saccharomyces cerevisiae YJM789 #=GS A6ZMU1/108-153_199-243 DE U3 snoRNP protein #=GS A6ZMU1/108-153_199-243 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS N1NXM1/108-153_199-243 AC N1NXM1 #=GS N1NXM1/108-153_199-243 OS Saccharomyces cerevisiae CEN.PK113-7D #=GS N1NXM1/108-153_199-243 DE Rrp5p #=GS N1NXM1/108-153_199-243 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C7GRC2/108-153_199-243 AC C7GRC2 #=GS C7GRC2/108-153_199-243 OS Saccharomyces cerevisiae JAY291 #=GS C7GRC2/108-153_199-243 DE Rrp5p #=GS C7GRC2/108-153_199-243 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B3LMB7/108-153_199-243 AC B3LMB7 #=GS B3LMB7/108-153_199-243 OS Saccharomyces cerevisiae RM11-1a #=GS B3LMB7/108-153_199-243 DE rRNA biogenesis protein RRP5 #=GS B3LMB7/108-153_199-243 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GF SQ 14 Q05022/108-153_199-243 -------IEHVNFKTLKNGSSLLGQISAITKQDLCITFTDGISGYVNLTHISEN--------------------ELPNLRRYFHIGQWLRCSVIKNTSLEPSTKKSKKKRIELTIEPS---- B3SB29/62-175 TDKDEVSVDAITISMYKKGVSVLGIVKEINPVDITVSLPGLLTGYIHITQMSSQMTQLLTRQLKSTELDGEDGVTQLDLNSFFRIGDMLRCVV---DEVE--LTKSKHKRIKLAIDPKI--- H2MCJ8/65-162 -------------QNVKVGMLMLGCVKTVADFEVSVGLPCGLQGFLSIKNICDSYTKLLSDQLES------DDAEICSLPHLFHPGMVLRCVV---AQLD--VTKGGSLSIQLSINPKLVNK Q752K8/102-147_183-227 -------VEHLSFKGLTSGTVLLGQLCGVNRTDLCIALTDGLRGYVPLTNISAT--------------------ELPELSKYFTLGQWLRCVVVKNSALD--SQKKKNSRIELSIEPSKV-- R9XAJ8/101-147_183-227 I------VEHLSFKGLAAGTVLLGQLCGVNRTDLCIALTDGLRGYVPLTHISAS--------------------ELPELSKYFTIGQWLRCVVVNNSALD--NQKKKNSRIELSIEPAKV-- H0GLD4/108-153_199-243 -------IEHVNFKTLKNGSSLLGQISAITKQDLCITFTDGISGYVNLTHISEN--------------------ELPNLRRYFHIGQWLRCSVIKNTSLEPSTKKSKKKRIELTIEPS---- A0A0L8RDN0/110-155_201-244 -------VEHVNFKTLKNGSSLLGQISSITRQDLCVTFTDGISGYVNLTHISDN--------------------ELPNLRKYFHIGQWLRCSVIKNTSLEPSTKKSKKKRIELTIEP----- A0A0L8VJA9/108-153_199-243 -------IEHVNFKTLKNGSSLLGQISAITKQDLCITFTDGISGYVNLTHISEN--------------------ELPNLRRYFHIGQWLRCSVIKNTSLEPSTKKSKKKRIELTIEPS---- G2WKT6/108-153_199-243 -------IEHVNFKTLKNGSSLLGQISAITKQDLCITFTDGISGYVNLTHISEN--------------------ELPNLRRYFHIGQWLRCSVIKNTSLEPSTKKSKKKRIELTIEPS---- C8ZF93/108-153_199-243 -------IEHVNFKTLKNGSSLLGQISAITKQDLCITFTDGISGYVNLTHISEN--------------------ELPNLRRYFHIGQWLRCSVIKNTSLEPSTKKSKKKRIELTIEPS---- A6ZMU1/108-153_199-243 -------IEHVNFKTLKNGSSLLGQISAITKQDLCITFTDGISGYVNLTHISEN--------------------ELPNLRRYFHIGQWLRCSVIKNTSLEPSTKKSKKKRIELTIEPS---- N1NXM1/108-153_199-243 -------IEHVNFKTLKNGSSLLGQISAITKQDLCITFTDGISGYVNLTHISEN--------------------ELPNLRRYFHIGQWLRCSVIKNTSLEPSTKKSKKKRIELTIEPS---- C7GRC2/108-153_199-243 -------IEHVNFKTLKNGSSLLGQISAITKQDLCITFTDGISGYVNLTHISEN--------------------ELPNLRRYFHIGQWLRCSVIKNTSLEPSTKKSKKKRIELTIEPS---- B3LMB7/108-153_199-243 -------IEHVNFKTLKNGSSLLGQISAITKQDLCITFTDGISGYVNLTHISEN--------------------ELPNLRRYFHIGQWLRCSVIKNTSLEPSTKKSKKKRIELTIEPS---- #=GC scorecons 00000004544345456394469946447543765746656649864665774400000000000000000000655494469559549995933344771144956446969596940000 #=GC scorecons_70 ________________*_*__***____*___*__*_*___*_***_**_**______________________*___*___*__*__***_*_____**____*_*__**_*_***_____ #=GC scorecons_80 __________________*___**________*__________**_____**__________________________*___*__*__***_*_____*_____*_____*_*_*_*_____ #=GC scorecons_90 __________________*___**___________________*__________________________________*___*__*__***_*___________*_____*_*_*_*_____ //