# STOCKHOLM 1.0
#=GF ID 2.40.50.140/FF/000375
#=GF DE DNA ligase k alpha, putative
#=GF AC 2.40.50.140/FF/000375
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 69.180
#=GS Q56AN9/421-509      AC Q56AN9
#=GS Q56AN9/421-509      OS Trypanosoma brucei
#=GS Q56AN9/421-509      DE Ligase IV-alpha
#=GS Q56AN9/421-509      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; 
#=GS Q56AN9/421-509      DR GO; GO:0005737; GO:0005739; GO:0020023; 
#=GS Q57VQ7/389-477      AC Q57VQ7
#=GS Q57VQ7/389-477      OS Trypanosoma brucei brucei TREU927
#=GS Q57VQ7/389-477      DE DNA ligase, putative
#=GS Q57VQ7/389-477      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q57VQ7/389-477      DR GO; GO:0003909; GO:0005739; GO:0020023; 
#=GS Q4Q960/535-625      AC Q4Q960
#=GS Q4Q960/535-625      OS Leishmania major
#=GS Q4Q960/535-625      DE Putative DNA ligase k alpha
#=GS Q4Q960/535-625      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4Q960/535-625      DR GO; GO:0005739; GO:0020023; 
#=GS Q4Q959/340-429      AC Q4Q959
#=GS Q4Q959/340-429      OS Leishmania major
#=GS Q4Q959/340-429      DE Putative DNA ligase
#=GS Q4Q959/340-429      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4Q959/340-429      DR GO; GO:0005737; 
#=GS A0A1G4I2F6/421-509  AC A0A1G4I2F6
#=GS A0A1G4I2F6/421-509  OS Trypanosoma equiperdum
#=GS A0A1G4I2F6/421-509  DE Mitochondrial DNA ligase homolog, LIG k-beta
#=GS A0A1G4I2F6/421-509  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS A0A088RTL9/539-629  AC A0A088RTL9
#=GS A0A088RTL9/539-629  OS Leishmania panamensis
#=GS A0A088RTL9/539-629  DE DNA ligase k alpha, putative
#=GS A0A088RTL9/539-629  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania panamensis; 
#=GS D6XJX8/421-509      AC D6XJX8
#=GS D6XJX8/421-509      OS Trypanosoma brucei brucei TREU927
#=GS D6XJX8/421-509      DE DNA ligase, putative
#=GS D6XJX8/421-509      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS D6XJX8/421-509      DR GO; GO:0005737; GO:0005739; GO:0020023; 
#=GS A4I264/340-429      AC A4I264
#=GS A4I264/340-429      OS Leishmania infantum
#=GS A4I264/340-429      DE Mitochondrial_DNA_ligase_homolog_-_putative
#=GS A4I264/340-429      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS A4HEY9/538-628      AC A4HEY9
#=GS A4HEY9/538-628      OS Leishmania braziliensis
#=GS A4HEY9/538-628      DE Putative DNA ligase k alpha
#=GS A4HEY9/538-628      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GS E9AYB3/535-625      AC E9AYB3
#=GS E9AYB3/535-625      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9AYB3/535-625      DE Putative DNA ligase k alpha
#=GS E9AYB3/535-625      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS E9BIE5/340-429      AC E9BIE5
#=GS E9BIE5/340-429      OS Leishmania donovani BPK282A1
#=GS E9BIE5/340-429      DE DNA ligase, putative
#=GS E9BIE5/340-429      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS A4I263/535-625      AC A4I263
#=GS A4I263/535-625      OS Leishmania infantum
#=GS A4I263/535-625      DE DNA_ligase_k_alpha_-_putative
#=GS A4I263/535-625      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS A0A3Q8IDV4/535-625  AC A0A3Q8IDV4
#=GS A0A3Q8IDV4/535-625  OS Leishmania donovani
#=GS A0A3Q8IDV4/535-625  DE DNA ligase k alpha, putative
#=GS A0A3Q8IDV4/535-625  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS E9BIE4/535-625      AC E9BIE4
#=GS E9BIE4/535-625      OS Leishmania donovani BPK282A1
#=GS E9BIE4/535-625      DE DNA ligase k alpha, putative
#=GS E9BIE4/535-625      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GF SQ 14
Q56AN9/421-509              KYMHDAEYRIVDFLPGNGKFEGGLGAFVCET-STGIRFNATPKTTTKRRLELWAER-DRLLGKYLTVQYQELSSQDVPRFPIAKCVRGESE-
Q57VQ7/389-477              KLMQDSEYIIVDGVEGKGKWRGCLGAFVCQT-RAGHRFTVAPATTEERKREMWHRL-NVYKGKMLTVQYQELSTNGVPRFPIGKCVRGTKT-
Q4Q960/535-625              KVMQDAEYVIVGAVEGSGKWKGFLGSFICVTPDKKHRFTVTPASTDADKRRMWQSWKTVYKGKALTVQYQEITADGVPRFPVGKCVRGAAD-
Q4Q959/340-429              KQMHDAEFKIVGFVPGEGKLKSALGAFVCTT-KDGKYFHTPPKVSCKRRIELWEHR-SEYLGKYLTVQYQELSSQNVPRFPIAKAIRGSEDK
A0A1G4I2F6/421-509          KYMHDAEYRIVDFLPGNGKFEGGLGAFVCET-STGIRFNATPKTTTKRRLELWAER-DRLLGKYLTVQYQELSSQDVPRFPIAKCVRGESE-
A0A088RTL9/539-629          KVMQDAEYVIVGAVEGSGKWKGFLGSFICVTPDKKHRFTVTPASTDAEKRRMWQSWKTAYKGKVLTVQYQEITPDGVPRFPVGKCVRGAAD-
D6XJX8/421-509              KYMHDAEYRIVDFLPGNGKFEGGLGAFVCET-STGIRFNATPKTTTKRRLELWAER-DRLLGKYLTVQYQELSSQDVPRFPIAKCVRGESE-
A4I264/340-429              KQMHDAEFKIVGFVPGEGKFKSALGAFVCTT-KDGKHFNTPPKVSCKHRIELWEHR-REYLGKYLTVQYQELSSQNVPRFPIAKAIRGSEDK
A4HEY9/538-628              KVMQDAEYVIVGAVEGSGKWKGFLGSFICVTPDKKHRFTVTPASTDAEKRRMWQSWKTAYKGKVLTVQYQEITPDGVPRFPVGKCVRGAAD-
E9AYB3/535-625              KVMQDAEYIIVGAVEGSGKWKGFLGSFICVTPDKKHRFTVTPASTDADKRRMWQSWKTVYKGKALTVQYQEITAEGVPRFPVGKCVRGAAD-
E9BIE5/340-429              KQMHDAEFKIVGFVPGEGKFKSALGAFVCTT-KDGKHFNTPPKVSCKHRIELWEHR-REYLGKYLTVQYQELSSQNVPRFPIAKAIRGSEDK
A4I263/535-625              KVMQDAEYVIVGAVEGSGKWKGFLGSFICVTPDKKHRFTVTPASTDADKQRMWQSWKTVYKGKALTVQYQEITADGVPRFPVGKCVRGAAD-
A0A3Q8IDV4/535-625          KVMQDAEYVIVGAVEGSGKWKGFLGSFICVTPDKKHRFTVTPASTDADKRRMWQSWKTVYKGKALTVQYQEITADGVPRFPVGKCVRGAAD-
E9BIE4/535-625              KVMQDAEYVIVGAVEGSGKWKGFLGSFICVTPDKKHRFTVTPASTDADKRRMWQSWKTVYKGKALTVQYQEITADGVPRFPVGKCVRGAAD-
#=GC scorecons              93969897399647594995663996979491445469556954635473569445143649939999999665559999976967994460
#=GC scorecons_70           *_******_***_*_*_**_**_**_***_*_____**___*__*___*__**______*_**_********____******_*_***__*_
#=GC scorecons_80           *_*_****_**____*_**____**_*_*_*______*___*__________*________**_*******_____*****__*_***____
#=GC scorecons_90           *_*_***__**____*_**____**_*_*_*______*___*__________*________**_*******_____*****__*__**____
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