# STOCKHOLM 1.0
#=GF ID 2.40.50.140/FF/000344
#=GF DE Replication protein A subunit
#=GF AC 2.40.50.140/FF/000344
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 39.957
#=GS Q384B5/256-462      AC Q384B5
#=GS Q384B5/256-462      OS Trypanosoma brucei brucei TREU927
#=GS Q384B5/256-462      DE Replication protein A subunit
#=GS Q384B5/256-462      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q384B5/256-462      DR GO; GO:0000784; GO:0003684; GO:0005654; GO:0006974; GO:0034399; 
#=GS Q4Q884/257-464      AC Q4Q884
#=GS Q4Q884/257-464      OS Leishmania major
#=GS Q4Q884/257-464      DE Replication protein A subunit
#=GS Q4Q884/257-464      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4Q884/257-464      DR GO; GO:0000784; GO:0003684; GO:0006974; GO:0034399; 
#=GS Q23696/257-453      AC Q23696
#=GS Q23696/257-453      OS Crithidia fasciculata
#=GS Q23696/257-453      DE Replication factor A 51 kDa subunit
#=GS Q23696/257-453      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Crithidia; Crithidia fasciculata; 
#=GS Q23696/257-453      DR GO; GO:0003697; GO:0005634; GO:0005662; GO:0006260; 
#=GS A0A0N0P825/257-466  AC A0A0N0P825
#=GS A0A0N0P825/257-466  OS Leptomonas seymouri
#=GS A0A0N0P825/257-466  DE Replication protein A subunit
#=GS A0A0N0P825/257-466  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leptomonas; Leptomonas seymouri; 
#=GS A0A1E1J0C0/258-466  AC A0A1E1J0C0
#=GS A0A1E1J0C0/258-466  OS Leishmania guyanensis
#=GS A0A1E1J0C0/258-466  DE Replication protein A subunit
#=GS A0A1E1J0C0/258-466  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania guyanensis; 
#=GS A0A1G4I1Y4/256-462  AC A0A1G4I1Y4
#=GS A0A1G4I1Y4/256-462  OS Trypanosoma equiperdum
#=GS A0A1G4I1Y4/256-462  DE Replication protein A subunit
#=GS A0A1G4I1Y4/256-462  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS A0A0M9G9C1/256-453  AC A0A0M9G9C1
#=GS A0A0M9G9C1/256-453  OS Leptomonas pyrrhocoris
#=GS A0A0M9G9C1/256-453  DE Replication protein A subunit
#=GS A0A0M9G9C1/256-453  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leptomonas; Leptomonas pyrrhocoris; 
#=GS E9BJR5/257-464      AC E9BJR5
#=GS E9BJR5/257-464      OS Leishmania donovani BPK282A1
#=GS E9BJR5/257-464      DE Replication protein A subunit
#=GS E9BJR5/257-464      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS E9B001/257-464      AC E9B001
#=GS E9B001/257-464      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9B001/257-464      DE Replication protein A subunit
#=GS E9B001/257-464      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS A4HGN5/258-466      AC A4HGN5
#=GS A4HGN5/258-466      OS Leishmania braziliensis
#=GS A4HGN5/258-466      DE Replication protein A subunit
#=GS A4HGN5/258-466      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GS A0A3L6KUD2/256-462  AC A0A3L6KUD2
#=GS A0A3L6KUD2/256-462  OS Trypanosoma brucei equiperdum
#=GS A0A3L6KUD2/256-462  DE Replication protein A subunit
#=GS A0A3L6KUD2/256-462  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei equiperdum; 
#=GS D0A8A0/256-462      AC D0A8A0
#=GS D0A8A0/256-462      OS Trypanosoma brucei gambiense DAL972
#=GS D0A8A0/256-462      DE Replication protein A subunit
#=GS D0A8A0/256-462      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei gambiense; 
#=GS A4I3Q8/257-464      AC A4I3Q8
#=GS A4I3Q8/257-464      OS Leishmania infantum
#=GS A4I3Q8/257-464      DE Replication protein A subunit
#=GS A4I3Q8/257-464      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS A0A088SDK1/258-466  AC A0A088SDK1
#=GS A0A088SDK1/258-466  OS Leishmania panamensis
#=GS A0A088SDK1/258-466  DE Replication protein A subunit
#=GS A0A088SDK1/258-466  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania panamensis; 
#=GS A0A3S7X1P8/257-464  AC A0A3S7X1P8
#=GS A0A3S7X1P8/257-464  OS Leishmania donovani
#=GS A0A3S7X1P8/257-464  DE Replication protein A subunit
#=GS A0A3S7X1P8/257-464  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS A0A3P3ZB17/258-466  AC A0A3P3ZB17
#=GS A0A3P3ZB17/258-466  OS Leishmania braziliensis MHOM/BR/75/M2904
#=GS A0A3P3ZB17/258-466  DE Replication protein A subunit
#=GS A0A3P3ZB17/258-466  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GF SQ 16
Q384B5/256-462              --QGNNALGLASSGETYRGYKYIDDITTEGLGKGPKPDYIDLRCVPVYLKQDTQWYDACPQCNKKVMLEGAMGDRFRCEKCDQSIVPTQRYLVSIQVTDNVSQVWLTLFNESGAEFFGMTAPELKRRQEEDPMFVTKVAQMRMNRPVLMRLRVKEEGLGG---NEDSERVRLNVVRITEFMPLDTVTEDKRQAMAAQLRQECDEMIKCINAY
Q4Q884/257-464              -SQGLGA-ASGAGGESDRGRKYLDEIQSEGIGRGLKPEYVDVRCVPIYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWLTLFNEAGIEFFGMEAAELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEEMSSNSMTGEESDRLRMSVVRISEFMPIAGTSEETRRRLAQNLRTECDEILRLIE--
Q23696/257-453              -SQGLGA-GGGGGGEGNRGRKYLDEIQSEGIGRGAKPEYVDVRCVPIYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDATVVPTQRYLVSIQVTDNVSQVWLTLFNEAGVEFFGMEASELKRRAQEDPLYIAKLAQARMNRPVVMRLRVKEETNANAMTGEESDRLRMSVVRISEFMPVAGTTEETRRRLAQNLR-------------
A0A0N0P825/257-466          -SQGLGA-GGGASGEGNRGRKYLDEIQSEGIGRGPKAEYVDVRCVPIYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDATVVPTQRYLVSIQVTDNVSQVWLTLFNEAGVEFFGMEASELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETNSNALTGEESDRLRMSVVRISEFMPIAGTSEETRRRLALNLRAECDDILRSIEAY
A0A1E1J0C0/258-466          --QGLGA-INGAGGENDRGRKYLDEIQSEGIGRGLKPEYVDVRCVPIYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWLTLFNEAGIEFFGMEAAELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETSSNAMTGEESDRLRMSVVRISEFMPIAGTSEDTRRRLAQNLRAECDEILRLIEAY
A0A1G4I1Y4/256-462          --QGNNALGLASSGETYRGYKYIDDITTEGLGKGPKPDYIDLRCVPVYLKQDTQWYDACPQCNKKVMLEGAMGDRFRCEKCDQSIVPTQRYLVSIQVTDNVSQVWLTLFNESGAEFFGMTAPELKRRQEEDPMFVTKVAQMRMNRPVLMRLRVKEEGLGG---NEDSERVRLNVVRITEFMPLDTVTEDKRQAMAAQLRQECDEMIKCINAY
A0A0M9G9C1/256-453          SSQDVGA-GGGANGEGNRGRKYLDEIQSEGIGRGPKPEYVDVRCVPIYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDATVVPTQRYLVSIQVTDNVSQVWLTLFNEAGVEFFGMEASELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETNANAMTGEESDRLRMSVVRISEFMPIAGTSEETRRRLAQNLR-------------
E9BJR5/257-464              -SQGLGA-ASGAGGESDRGRKYLDEIQSEGIGRGLKPEYVDVRCVPIYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWLTLFNEAGIEFFGMEAAELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETSSNAMTGEESDRLRMSVVRISEFMPIAGTSEETRRRLAQNLRTECDEILRLIE--
E9B001/257-464              -SQGLGA-ASGAGGESDRGRKYLDEIQSDGIGRGLKPEYVDVRCVPIYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWLTLFNEAGIEFFGMEAAELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETSSNAMTGEESDRLRMSVVRISEFMPIAGTSEETRRRLAQNLRTECDEILRLIE--
A4HGN5/258-466              --QGLGA-INGAGGENDRGRKYLDEIQSEGIGRGLKPEYVDVRCVPIYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWLTLFNEAGIEFFGMEAAELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETSSNAMTGEESDRLRMSVVRISEFMPIAGTSEDTRRRLAQNLRAECDEILRLIEAY
A0A3L6KUD2/256-462          --QGNNALGLASSGETYRGYKYIDDITTEGLGKGPKPDYIDLRCVPVYLKQDTQWYDACPQCNKKVMLEGAMGDRFRCEKCDQSIVPTQRYLVSIQVTDNVSQVWLTLFNESGAEFFGMTAPELKRRQEEDPMFVTKVAQMRMNRPVLMRLRVKEEGLGG---NEDSERVRLNVVRITEFMPLDTVTEDKRQAMAAQLRQECDEMIKCINAY
D0A8A0/256-462              --QGNNALGLASSGETYRGYKYIDDITTEGLGKGPKPDYIDLRCVPVYLKQDTQWYDACPQCNKKVMLEGAMGDRFRCEKCDQSIVPTQRYLVSIQVTDNVSQVWLTLFNESGAEFFGMTAPELKRRQEEDPMFVTKVAQMRMNRPVLMRLRVKEEGLGG---NEDSERVRLNVVRITEFMPLDTVTEDKRQAMAAQLRQECDEMIKCINAY
A4I3Q8/257-464              -SQGLGA-ASGAGGESDRGRKYLDEIQSEGIGRGLKPEYVDVRCVPIYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWLTLFNEAGIEFFGMEAAELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETSSNAMTGEESDRLRMSVVRISEFMPIAGTSEETRRRLAQNLRTECDEILRLIE--
A0A088SDK1/258-466          --QGLGA-INGAGGESDRGRKYLDEIQSEGIGRGLKPEYVDVRCVPIYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWLTLFNEAGIEFFGMEAAELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETSSNAMTGEESDRLRMSVVRISEFMPIAGTSEDTRRRLAQNLRAECDEILRLIEAY
A0A3S7X1P8/257-464          -SQGLGA-ASGAGGESDRGRKYLDEIQSEGIGRGLKPEYVDVRCVPIYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWLTLFNEAGIEFFGMEAAELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETSSNAMTGEESDRLRMSVVRISEFMPIAGTSEETRRRLAQNLRTECDEILRLIE--
A0A3P3ZB17/258-466          --QGLGA-INGAGGENDRGRKYLDEIQSEGIGRGLKPEYVDVRCVPIYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWLTLFNEAGIEFFGMEAAELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETSSNAMTGEESDRLRMSVVRISEFMPIAGTSEDTRRRLAQNLRAECDEILRLIEAY
#=GC scorecons              01984591536559944995996979568969795987979699997969996999999959999954999599999999995675999999999999999996999999969599999595999995699967769699499999969999999954552335979796966999969999655569759656955993666644536433
#=GC scorecons_70           __**__*______**__**_******__******_*************************_*****__***_**********__*_*****************_*******_*_*****_*_*****_************_***************________********_****_****_____**_**_**__**_***_____*___
#=GC scorecons_80           __**__*______**__**_**_*_*__**_*_*_**_*_*_****_*_***_*******_*****__***_**********____*****************_*******_*_*****_*_*****__***_*__*_**_******_********________*_*_*_*__****_****_____*__*___*__**_____________
#=GC scorecons_90           __**__*______**__**_**_*_*__**_*_*_**_*_*_****_*_***_*******_*****__***_**********____*****************_*******_*_*****_*_*****__***____*_**_******_********________*_*_*_*__****_****_____*__*___*__**_____________
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