# STOCKHOLM 1.0
#=GF ID 2.40.50.140/FF/000327
#=GF DE Replication protein A1, large subunit
#=GF AC 2.40.50.140/FF/000327
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 4.437
#=GS Q9U0J0/682-790      AC Q9U0J0
#=GS Q9U0J0/682-790      OS Plasmodium falciparum 3D7
#=GS Q9U0J0/682-790      DE Replication protein A1, large subunit
#=GS Q9U0J0/682-790      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q9U0J0/682-790      DR GO; GO:0006260; GO:0006261; GO:0051052; 
#=GS A0A151LUE3/631-739  AC A0A151LUE3
#=GS A0A151LUE3/631-739  OS Plasmodium gaboni
#=GS A0A151LUE3/631-739  DE Replication protein A1, large subunit
#=GS A0A151LUE3/631-739  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium gaboni; 
#=GS A0A151LSA7/664-772  AC A0A151LSA7
#=GS A0A151LSA7/664-772  OS Plasmodium reichenowi
#=GS A0A151LSA7/664-772  DE Replication protein A large subunit
#=GS A0A151LSA7/664-772  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS W4IN45/677-785      AC W4IN45
#=GS W4IN45/677-785      OS Plasmodium falciparum NF135/5.C10
#=GS W4IN45/677-785      DE Uncharacterized protein
#=GS W4IN45/677-785      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4J5M4/683-791      AC W4J5M4
#=GS W4J5M4/683-791      OS Plasmodium falciparum Palo Alto/Uganda
#=GS W4J5M4/683-791      DE Uncharacterized protein
#=GS W4J5M4/683-791      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VCS0/680-788  AC A0A024VCS0
#=GS A0A024VCS0/680-788  OS Plasmodium falciparum Vietnam Oak-Knoll (FVO)
#=GS A0A024VCS0/680-788  DE Uncharacterized protein
#=GS A0A024VCS0/680-788  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BZI8/682-790  AC A0A2I0BZI8
#=GS A0A2I0BZI8/682-790  OS Plasmodium falciparum NF54
#=GS A0A2I0BZI8/682-790  DE Replication protein A1
#=GS A0A2I0BZI8/682-790  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VTV0/693-801  AC A0A024VTV0
#=GS A0A024VTV0/693-801  OS Plasmodium falciparum FCH/4
#=GS A0A024VTV0/693-801  DE Uncharacterized protein
#=GS A0A024VTV0/693-801  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7KFE2/680-788  AC A0A0L7KFE2
#=GS A0A0L7KFE2/680-788  OS Plasmodium falciparum HB3
#=GS A0A0L7KFE2/680-788  DE Uncharacterized protein
#=GS A0A0L7KFE2/680-788  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FVV1/680-788      AC W7FVV1
#=GS W7FVV1/680-788      OS Plasmodium falciparum Santa Lucia
#=GS W7FVV1/680-788      DE Uncharacterized protein
#=GS W7FVV1/680-788      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WDR5/120-228  AC A0A024WDR5
#=GS A0A024WDR5/120-228  OS Plasmodium falciparum Tanzania (2000708)
#=GS A0A024WDR5/120-228  DE Uncharacterized protein
#=GS A0A024WDR5/120-228  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JUJ9/684-792      AC W7JUJ9
#=GS W7JUJ9/684-792      OS Plasmodium falciparum UGT5.1
#=GS W7JUJ9/684-792      DE Uncharacterized protein
#=GS W7JUJ9/684-792      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FC09/678-786      AC W7FC09
#=GS W7FC09/678-786      OS Plasmodium falciparum 7G8
#=GS W7FC09/678-786      DE Uncharacterized protein
#=GS W7FC09/678-786      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7KA78/681-789      AC W7KA78
#=GS W7KA78/681-789      OS Plasmodium falciparum NF54
#=GS W7KA78/681-789      DE Uncharacterized protein
#=GS W7KA78/681-789      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WXL6/683-791  AC A0A024WXL6
#=GS A0A024WXL6/683-791  OS Plasmodium falciparum MaliPS096_E11
#=GS A0A024WXL6/683-791  DE Uncharacterized protein
#=GS A0A024WXL6/683-791  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024XEA4/683-791  AC A0A024XEA4
#=GS A0A024XEA4/683-791  OS Plasmodium falciparum CAMP/Malaysia
#=GS A0A024XEA4/683-791  DE Uncharacterized protein
#=GS A0A024XEA4/683-791  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A060RNT7/664-772  AC A0A060RNT7
#=GS A0A060RNT7/664-772  OS Plasmodium reichenowi
#=GS A0A060RNT7/664-772  DE Replication protein A large subunit
#=GS A0A060RNT7/664-772  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS A0A0L1I410/681-789  AC A0A0L1I410
#=GS A0A0L1I410/681-789  OS Plasmodium falciparum IGH-CR14
#=GS A0A0L1I410/681-789  DE Replication factor a protein
#=GS A0A0L1I410/681-789  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GF SQ 18
Q9U0J0/682-790              ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
A0A151LUE3/631-739          ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGQVFNIELCDEDGEIKANFFGKAVDKWYDFIEVGKIYKIGKGIIKVANKKFNTLNHDYEITLDENSLIEILDE
A0A151LSA7/664-772          ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
W4IN45/677-785              ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
W4J5M4/683-791              ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
A0A024VCS0/680-788          ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
A0A2I0BZI8/682-790          ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
A0A024VTV0/693-801          ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
A0A0L7KFE2/680-788          ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
W7FVV1/680-788              ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
A0A024WDR5/120-228          ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
W7JUJ9/684-792              ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
W7FC09/678-786              ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
W7KA78/681-789              ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
A0A024WXL6/683-791          ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
A0A024XEA4/683-791          ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
A0A060RNT7/664-772          ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
A0A0L1I410/681-789          ILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDE
#=GC scorecons              9999999999999999999999999999999999999599999999999999999999999996999999999995996999999999999999999999999999999
#=GC scorecons_70           *************************************_*************************************_**_******************************
#=GC scorecons_80           *************************************_*************************_***********_**_******************************
#=GC scorecons_90           *************************************_*************************_***********_**_******************************
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