# STOCKHOLM 1.0
#=GF ID 2.40.50.140/FF/000326
#=GF DE Replication protein A1, small
#=GF AC 2.40.50.140/FF/000326
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 1.711
#=GS Q8I3A1/250-456      AC Q8I3A1
#=GS Q8I3A1/250-456      OS Plasmodium falciparum 3D7
#=GS Q8I3A1/250-456      DE Replication protein A1, small
#=GS Q8I3A1/250-456      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A060RRP7/250-457  AC A0A060RRP7
#=GS A0A060RRP7/250-457  OS Plasmodium reichenowi
#=GS A0A060RRP7/250-457  DE Replication factor A-related protein, putative
#=GS A0A060RRP7/250-457  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS A0A2P9BCX7/250-456  AC A0A2P9BCX7
#=GS A0A2P9BCX7/250-456  OS Plasmodium sp. gorilla clade G1
#=GS A0A2P9BCX7/250-456  DE Replication protein A1, small
#=GS A0A2P9BCX7/250-456  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium sp. gorilla clade G1; 
#=GS W7F5X1/245-451      AC W7F5X1
#=GS W7F5X1/245-451      OS Plasmodium falciparum 7G8
#=GS W7F5X1/245-451      DE Uncharacterized protein
#=GS W7F5X1/245-451      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FQV0/250-456      AC W7FQV0
#=GS W7FQV0/250-456      OS Plasmodium falciparum Santa Lucia
#=GS W7FQV0/250-456      DE Uncharacterized protein
#=GS W7FQV0/250-456      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7K4V0/250-456  AC A0A0L7K4V0
#=GS A0A0L7K4V0/250-456  OS Plasmodium falciparum HB3
#=GS A0A0L7K4V0/250-456  DE Uncharacterized protein
#=GS A0A0L7K4V0/250-456  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VR73/250-456  AC A0A024VR73
#=GS A0A024VR73/250-456  OS Plasmodium falciparum FCH/4
#=GS A0A024VR73/250-456  DE Uncharacterized protein
#=GS A0A024VR73/250-456  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FNL2/244-450      AC W7FNL2
#=GS W7FNL2/244-450      OS Plasmodium falciparum 7G8
#=GS W7FNL2/244-450      DE Uncharacterized protein
#=GS W7FNL2/244-450      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024W8B5/250-456  AC A0A024W8B5
#=GS A0A024W8B5/250-456  OS Plasmodium falciparum Tanzania (2000708)
#=GS A0A024W8B5/250-456  DE Uncharacterized protein
#=GS A0A024W8B5/250-456  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JPD6/250-456      AC W7JPD6
#=GS W7JPD6/250-456      OS Plasmodium falciparum UGT5.1
#=GS W7JPD6/250-456      DE Uncharacterized protein
#=GS W7JPD6/250-456      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7LWQ8/250-456  AC A0A0L7LWQ8
#=GS A0A0L7LWQ8/250-456  OS Plasmodium falciparum Dd2
#=GS A0A0L7LWQ8/250-456  DE Uncharacterized protein
#=GS A0A0L7LWQ8/250-456  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4IHR1/250-456      AC W4IHR1
#=GS W4IHR1/250-456      OS Plasmodium falciparum NF135/5.C10
#=GS W4IHR1/250-456      DE Uncharacterized protein
#=GS W4IHR1/250-456      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WRM1/250-456  AC A0A024WRM1
#=GS A0A024WRM1/250-456  OS Plasmodium falciparum MaliPS096_E11
#=GS A0A024WRM1/250-456  DE Uncharacterized protein
#=GS A0A024WRM1/250-456  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L1I3V8/250-456  AC A0A0L1I3V8
#=GS A0A0L1I3V8/250-456  OS Plasmodium falciparum IGH-CR14
#=GS A0A0L1I3V8/250-456  DE Replication protein A large subunit
#=GS A0A0L1I3V8/250-456  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024X8M0/250-456  AC A0A024X8M0
#=GS A0A024X8M0/250-456  OS Plasmodium falciparum CAMP/Malaysia
#=GS A0A024X8M0/250-456  DE Uncharacterized protein
#=GS A0A024X8M0/250-456  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4J5N2/250-456      AC W4J5N2
#=GS W4J5N2/250-456      OS Plasmodium falciparum Palo Alto/Uganda
#=GS W4J5N2/250-456      DE Uncharacterized protein
#=GS W4J5N2/250-456      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7KG26/250-456      AC W7KG26
#=GS W7KG26/250-456      OS Plasmodium falciparum NF54
#=GS W7KG26/250-456      DE Replication protein A1
#=GS W7KG26/250-456      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024V5Y1/250-456  AC A0A024V5Y1
#=GS A0A024V5Y1/250-456  OS Plasmodium falciparum Vietnam Oak-Knoll (FVO)
#=GS A0A024V5Y1/250-456  DE Uncharacterized protein
#=GS A0A024V5Y1/250-456  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GF SQ 18
Q8I3A1/250-456              GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
A0A060RRP7/250-457          GKYEQFTNMRNILSNDVTQTPDKHYALSDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHDNNNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
A0A2P9BCX7/250-456          GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
W7F5X1/245-451              GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
W7FQV0/250-456              GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
A0A0L7K4V0/250-456          GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
A0A024VR73/250-456          GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
W7FNL2/244-450              GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
A0A024W8B5/250-456          GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
W7JPD6/250-456              GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
A0A0L7LWQ8/250-456          GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
W4IHR1/250-456              GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
A0A024WRM1/250-456          GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
A0A0L1I3V8/250-456          GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
A0A024X8M0/250-456          GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
W4J5N2/250-456              GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
W7KG26/250-456              GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
A0A024V5Y1/250-456          GKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSKENEHRFYYPACMKCKKKLLSSGHD-NNMDNEFDNPEEDNIVYSCMNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEYKIVVRVNQKAYNGIERVNFTAMKIFPLKPTDITSLLTEIQL
#=GC scorecons              9999999999999999999999999559999999999999999999999999999999999999999999999999999099999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999
#=GC scorecons_70           *************************__****************************************************_********************************************************************************************************************************
#=GC scorecons_80           *************************__****************************************************_********************************************************************************************************************************
#=GC scorecons_90           *************************__****************************************************_********************************************************************************************************************************
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