# STOCKHOLM 1.0
#=GF ID 2.40.50.140/FF/000312
#=GF DE Exosome complex component CSL4
#=GF AC 2.40.50.140/FF/000312
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 65.733
#=GS 5c0xI02/129-295       AC P53859
#=GS 5c0xI02/129-295       OS Saccharomyces cerevisiae S288C
#=GS 5c0xI02/129-295       DE Exosome complex component CSL4
#=GS 5c0xI02/129-295       DR CATH; 5c0x; I:126-291; 
#=GS 5c0xI02/129-295       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5c0xI02/129-295       DR GO; GO:0000176; GO:0000177; GO:0000467; GO:0005515; GO:0005634; GO:0005737; GO:0016973; GO:0034427; GO:0043628; GO:0070478; GO:0070481; GO:0070651; GO:0071035; GO:0071038; GO:0071042; GO:0071051; 
#=GS 4oo1I02/132-296       AC P53859
#=GS 4oo1I02/132-296       OS Saccharomyces cerevisiae S288C
#=GS 4oo1I02/132-296       DE Exosome complex component CSL4
#=GS 4oo1I02/132-296       DR CATH; 4oo1; I:128-291; 
#=GS 4oo1I02/132-296       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 4oo1I02/132-296       DR GO; GO:0000176; GO:0000177; GO:0000467; GO:0005515; GO:0005634; GO:0005737; GO:0016973; GO:0034427; GO:0043628; GO:0070478; GO:0070481; GO:0070651; GO:0071035; GO:0071038; GO:0071042; GO:0071051; 
#=GS 4ifdI02/135-301       AC P53859
#=GS 4ifdI02/135-301       OS Saccharomyces cerevisiae S288C
#=GS 4ifdI02/135-301       DE Exosome complex component CSL4
#=GS 4ifdI02/135-301       DR CATH; 4ifd; I:126-291; 
#=GS 4ifdI02/135-301       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 4ifdI02/135-301       DR GO; GO:0000176; GO:0000177; GO:0000467; GO:0005515; GO:0005634; GO:0005737; GO:0016973; GO:0034427; GO:0043628; GO:0070478; GO:0070481; GO:0070651; GO:0071035; GO:0071038; GO:0071042; GO:0071051; 
#=GS P53859/126-292        AC P53859
#=GS P53859/126-292        OS Saccharomyces cerevisiae S288C
#=GS P53859/126-292        DE Exosome complex component CSL4
#=GS P53859/126-292        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P53859/126-292        DR GO; GO:0000176; GO:0000177; GO:0000467; GO:0005515; GO:0005634; GO:0005737; GO:0016973; GO:0034427; GO:0043628; GO:0070478; GO:0070481; GO:0070651; GO:0071035; GO:0071038; GO:0071042; GO:0071051; 
#=GS Q6CHR4/107-272        AC Q6CHR4
#=GS Q6CHR4/107-272        OS Yarrowia lipolytica CLIB122
#=GS Q6CHR4/107-272        DE YALI0A05995p
#=GS Q6CHR4/107-272        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS A0A1D8PD51/146-328    AC A0A1D8PD51
#=GS A0A1D8PD51/146-328    OS Candida albicans SC5314
#=GS A0A1D8PD51/146-328    DE Exosome non-catalytic core subunit
#=GS A0A1D8PD51/146-328    DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS R9X9M0/124-288        AC R9X9M0
#=GS R9X9M0/124-288        OS Saccharomycetaceae sp. 'Ashbya aceri'
#=GS R9X9M0/124-288        DE AaceriABL199Wp
#=GS R9X9M0/124-288        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; 
#=GS Q75E69/124-288        AC Q75E69
#=GS Q75E69/124-288        OS Eremothecium gossypii ATCC 10895
#=GS Q75E69/124-288        DE ABL199Wp
#=GS Q75E69/124-288        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS B9W7F8/140-320        AC B9W7F8
#=GS B9W7F8/140-320        OS Candida dubliniensis CD36
#=GS B9W7F8/140-320        DE 3'-5' exoribonuclease, exosome subunit, putative
#=GS B9W7F8/140-320        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; 
#=GS A0A0L8RC39/160-326    AC A0A0L8RC39
#=GS A0A0L8RC39/160-326    OS Saccharomyces eubayanus
#=GS A0A0L8RC39/160-326    DE CSL4-like protein
#=GS A0A0L8RC39/160-326    DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS J8PJ26/126-292        AC J8PJ26
#=GS J8PJ26/126-292        OS Saccharomyces arboricola H-6
#=GS J8PJ26/126-292        DE Csl4p
#=GS J8PJ26/126-292        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; 
#=GS H0GMA5/126-292        AC H0GMA5
#=GS H0GMA5/126-292        OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GMA5/126-292        DE Csl4p
#=GS H0GMA5/126-292        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8VIB6/2361-2527  AC A0A0L8VIB6
#=GS A0A0L8VIB6/2361-2527  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VIB6/2361-2527  DE Mediator of RNA polymerase II transcription subunit 16
#=GS A0A0L8VIB6/2361-2527  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS A0A1H6PXC1/107-272    AC A0A1H6PXC1
#=GS A0A1H6PXC1/107-272    OS Yarrowia lipolytica
#=GS A0A1H6PXC1/107-272    DE Uncharacterized protein
#=GS A0A1H6PXC1/107-272    DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS C4YEQ0/147-328        AC C4YEQ0
#=GS C4YEQ0/147-328        OS Candida albicans WO-1
#=GS C4YEQ0/147-328        DE Uncharacterized protein
#=GS C4YEQ0/147-328        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS A6ZRL0/126-292        AC A6ZRL0
#=GS A6ZRL0/126-292        OS Saccharomyces cerevisiae YJM789
#=GS A6ZRL0/126-292        DE Conserved protein
#=GS A6ZRL0/126-292        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GPC7/126-292        AC C7GPC7
#=GS C7GPC7/126-292        OS Saccharomyces cerevisiae JAY291
#=GS C7GPC7/126-292        DE Csl4p
#=GS C7GPC7/126-292        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WLN3/126-292        AC G2WLN3
#=GS G2WLN3/126-292        OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WLN3/126-292        DE K7_Csl4p
#=GS G2WLN3/126-292        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VQH8/126-292        AC B5VQH8
#=GS B5VQH8/126-292        OS Saccharomyces cerevisiae AWRI1631
#=GS B5VQH8/126-292        DE YNL232Wp-like protein
#=GS B5VQH8/126-292        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8ZG03/126-292        AC C8ZG03
#=GS C8ZG03/126-292        OS Saccharomyces cerevisiae EC1118
#=GS C8ZG03/126-292        DE Csl4p
#=GS C8ZG03/126-292        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LP73/126-292        AC B3LP73
#=GS B3LP73/126-292        OS Saccharomyces cerevisiae RM11-1a
#=GS B3LP73/126-292        DE 3'-5' exoribonuclease CSL4
#=GS B3LP73/126-292        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1NYG7/126-292        AC N1NYG7
#=GS N1NYG7/126-292        OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1NYG7/126-292        DE Csl4p
#=GS N1NYG7/126-292        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF SQ 22
5c0xI02/129-295               -NDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPI-DSGIGSNGSGI--------------VAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAKPF
4oo1I02/132-296               ---FANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPI-DSGIGSNGSGI--------------VAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAKPF
4ifdI02/135-301               -NDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPI-DSGIGSNGSGI--------------VAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAKPF
P53859/126-292                -NDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPI-DSGIGSNGSGI--------------VAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAKPF
Q6CHR4/107-272                --SASSGLPKVGDYILARVSKLTSKQANVEILVVEGQGGVGQDAGLGLNGN-------------ENGIHSNPLSNAGSLVEGAIRSDLGEGFGGIIRSIDVRATERDKVKMELCFKPGDIVRAQVISLGDGANYYLSTAKNELGVLFARSK--IGELMYATDWQTMACPVTGLTEERKCASPY
A0A1D8PD51/146-328            KAISAIALPKENDIVLVRITKITKIQAYCEIISLDTTTNILPDSGLGNNGNGSHVSMSITGSNSQHNFNQNSIASSQSTNQSVQIYELGENFKGIIRINDIRSTERDKLKLIDCFKPGDIVKAQVISLGDGSNYYLTTAKNELGVVFAKSENGAGDLMYPIDWQNMIDINSGVIEKRKNANPF
R9X9M0/124-288                -TDFANHLPKEGDIVLTRVTRITSQRANVEILAVENTNSPI-DYGVGSKGSGI--------------VASNGGN--TGFSMSQVPSDLGETFRGIIRSQDVRATNRDQVKMVEAFRPGDIVRAQVLSLGDGSNYYLSTARNDLGVVFARASNGAGGLMYAVDWHTMVAPSTGVTELRKCAKPF
Q75E69/124-288                -TDFANHLPKEGDVVLTRVTRITLQRANVEILAVENTNSPI-DYGVGSKGSGI--------------VASNGGN--TGFSMSQVPSDLGETFRGIIRSQDVRATNRDQVKMVEAFRPGDIVRAQVLSLGDGSNYYLTTARNDLGVVFAKASNGAGGLMYAVDWHTMVAPSTGVTELRKCAKPF
B9W7F8/140-320                --VSSIALPKENDIVLVRITKITKIQAYCEIISLDTTTNILSDSGISSNGNGSHVSMSTTGSNSQHLFNQNSIACSQSTNQSVQIYELGENFKGIIRINDIRSTERDKLKIIDCFKPGDIVKAQVISLGDGSNYYLSTAKNELGVVFAKSENGAGDLMYPIDWQNMIDINSGIIEKRKNANPF
A0A0L8RC39/160-326            -NDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPI-DSGVGSNGMGI--------------IAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPATGVTEKRKCAKPF
J8PJ26/126-292                -NEFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPV-DSGVGSNGVGI--------------VAAGGGSGAATFSVSQASSDLGESFRGIIRSQDVRSTDRDRVKVIDCFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPSTGMTEKRKCAKPF
H0GMA5/126-292                -NDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPI-DSGIGSNGSGI--------------VAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAKPF
A0A0L8VIB6/2361-2527          -NDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPI-DSGIGSNGSGI--------------VAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAKPF
A0A1H6PXC1/107-272            --SASSGLPKVGDYILARVSKLTSKQANVEILVVEGQGGVGQDAGLGLNGN-------------ENGIHSNPLSNAGSLVEGAIRSDLGEGFGGIIRSIDVRATERDKVKMELCFKPGDIVRAQVISLGDGANYYLSTAKNELGVLFARSK--IGELMYATDWQTMACPVTGLTEERKCASPY
C4YEQ0/147-328                -AISAIALPKENDIVLVRITKITKIQAYCEIISLDTTTNILPDSGLGNNGNGSHVSMSTTGSNSQHNFNQNSIASSQSTNQSVQIYELGENFKGIIRINDIRSTERDKLKLIDCFKPGDIVKAQVISLGDGSNYYLTTAKNELGVVFAKSENGAGDLMYPIDWQNMIDINSGVIEKRKNANPF
A6ZRL0/126-292                -NDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPI-DSGIGSNGSGI--------------VAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAKPF
C7GPC7/126-292                -NDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPI-DSGIGSNGSGI--------------VAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAKPF
G2WLN3/126-292                -NDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPI-DSGIGSNGSGI--------------VAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAKPF
B5VQH8/126-292                -NDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPI-DSGIGSNGSGI--------------VAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAKPF
C8ZG03/126-292                -NDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPI-DSGIGSNGSGI--------------VAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAKPF
B3LP73/126-292                -NDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPI-DSGIGSNGSGI--------------VAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAKPF
N1NYG7/126-292                -NDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPI-DSGIGSNGSGI--------------VAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAKPF
#=GC scorecons                023464499966967959777664469659965674445440969675795630000000000011055455453545454744467999595999964979696996695657989999979996999995999969979799979976466795999659984954546946959969598
#=GC scorecons_70             ____*__*********_*****___**__***_**_______*_*_*_**_______________________________*____****_*_****__***********___******************_*****************____**_****_***_*____**_**_**_*_**
#=GC scorecons_80             _______***__*_**_***______*__**___*_______*_*_*_**_______________________________*____****_*_****__***_*_**__*___************_*****_****_**_*_*******_____*_***__***_*_____*__*_**_*_**
#=GC scorecons_90             _______***__*__*_*________*__**___________*_*____*_____________________________________***_*_****__*_*_*_**__*____*******_***_*****_****_**_*_***_**______*_***__***_*_____*__*_**_*_*_
//