# STOCKHOLM 1.0
#=GF ID 2.40.50.140/FF/000274
#=GF DE Mitochondrial RNA binding protein
#=GF AC 2.40.50.140/FF/000274
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 85.259
#=GS H0Y449/117-190    AC H0Y449
#=GS H0Y449/117-190    OS Homo sapiens
#=GS H0Y449/117-190    DE Nuclease-sensitive element-binding protein 1
#=GS H0Y449/117-190    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS H0Y449/117-190    DR GO; GO:0005829; GO:0031965; GO:0043231; 
#=GS G5EDV3/85-171     AC G5EDV3
#=GS G5EDV3/85-171     OS Caenorhabditis elegans
#=GS G5EDV3/85-171     DE C. Elegans Y-box
#=GS G5EDV3/85-171     DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS G5EDV3/85-171     DR GO; GO:0043021; GO:1990904; 
#=GS P91306/55-138     AC P91306
#=GS P91306/55-138     OS Caenorhabditis elegans
#=GS P91306/55-138     DE C. Elegans Y-box
#=GS P91306/55-138     DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS P91306/55-138     DR GO; GO:1990904; 
#=GS Q384M8/17-92      AC Q384M8
#=GS Q384M8/17-92      OS Trypanosoma brucei brucei TREU927
#=GS Q384M8/17-92      DE Mitochondrial RNA binding protein
#=GS Q384M8/17-92      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q384M8/17-92      DR GO; GO:0003723; GO:0005730; GO:0005737; GO:0005739; GO:0009451; GO:0010608; 
#=GS Q4Q8I6/17-92      AC Q4Q8I6
#=GS Q4Q8I6/17-92      OS Leishmania major
#=GS Q4Q8I6/17-92      DE Putative RNA binding protein rbp16
#=GS Q4Q8I6/17-92      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4Q8I6/17-92      DR GO; GO:0005730; GO:0005737; 
#=GS P91398/61-146     AC P91398
#=GS P91398/61-146     OS Caenorhabditis elegans
#=GS P91398/61-146     DE C. Elegans Y-box
#=GS P91398/61-146     DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS P91398/61-146     DR GO; GO:0043021; GO:1990904; 
#=GS Q4DCA9/18-92      AC Q4DCA9
#=GS Q4DCA9/18-92      OS Trypanosoma cruzi strain CL Brener
#=GS Q4DCA9/18-92      DE Mitochondrial RNA binding protein, putative
#=GS Q4DCA9/18-92      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Schizotrypanum; Trypanosoma cruzi; 
#=GS A0A0N0VHA5/17-92  AC A0A0N0VHA5
#=GS A0A0N0VHA5/17-92  OS Leptomonas pyrrhocoris
#=GS A0A0N0VHA5/17-92  DE Putative mitochondrial RNA binding protein rbp16
#=GS A0A0N0VHA5/17-92  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leptomonas; Leptomonas pyrrhocoris; 
#=GS A0A1X0NZ24/17-92  AC A0A1X0NZ24
#=GS A0A1X0NZ24/17-92  OS Trypanosoma theileri
#=GS A0A1X0NZ24/17-92  DE Mitochondrial RNA-binding protein
#=GS A0A1X0NZ24/17-92  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanosoma theileri; 
#=GS G0UC31/18-92      AC G0UC31
#=GS G0UC31/18-92      OS Trypanosoma vivax Y486
#=GS G0UC31/18-92      DE Putative mitochondrial RNA binding protein
#=GS G0UC31/18-92      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Duttonella; Trypanosoma vivax; 
#=GS A0A1G4IGK0/17-92  AC A0A1G4IGK0
#=GS A0A1G4IGK0/17-92  OS Trypanosoma equiperdum
#=GS A0A1G4IGK0/17-92  DE Mitochondrial RNA binding protein 16
#=GS A0A1G4IGK0/17-92  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS A0A3P3ZAR5/17-92  AC A0A3P3ZAR5
#=GS A0A3P3ZAR5/17-92  OS Leishmania braziliensis MHOM/BR/75/M2904
#=GS A0A3P3ZAR5/17-92  DE RNA_binding_protein_rbp16
#=GS A0A3P3ZAR5/17-92  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GS Q9XY40/17-92      AC Q9XY40
#=GS Q9XY40/17-92      OS Trypanosoma brucei
#=GS Q9XY40/17-92      DE RNA binding protein
#=GS Q9XY40/17-92      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; 
#=GS Q9XY40/17-92      DR GO; GO:0003723; GO:0005730; GO:0005737; GO:0005739; GO:0009451; GO:0010608; 
#=GS D0A7Y1/17-92      AC D0A7Y1
#=GS D0A7Y1/17-92      OS Trypanosoma brucei gambiense DAL972
#=GS D0A7Y1/17-92      DE Mitochondrial RNA binding protein
#=GS D0A7Y1/17-92      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei gambiense; 
#=GS A0A088SDB5/17-92  AC A0A088SDB5
#=GS A0A088SDB5/17-92  OS Leishmania panamensis
#=GS A0A088SDB5/17-92  DE RNA binding protein rbp16, putative
#=GS A0A088SDB5/17-92  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania panamensis; 
#=GS A0A3S7X1B7/17-92  AC A0A3S7X1B7
#=GS A0A3S7X1B7/17-92  OS Leishmania donovani
#=GS A0A3S7X1B7/17-92  DE RNA binding protein rbp16, putative
#=GS A0A3S7X1B7/17-92  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS E9AZP7/17-92      AC E9AZP7
#=GS E9AZP7/17-92      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9AZP7/17-92      DE Putative RNA binding protein rbp16
#=GS E9AZP7/17-92      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS A0A1E1J012/17-92  AC A0A1E1J012
#=GS A0A1E1J012/17-92  OS Leishmania guyanensis
#=GS A0A1E1J012/17-92  DE RNA binding protein rbp16, putative
#=GS A0A1E1J012/17-92  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania guyanensis; 
#=GS A4I3F8/17-92      AC A4I3F8
#=GS A4I3F8/17-92      OS Leishmania infantum
#=GS A4I3F8/17-92      DE Putative RNA binding protein rbp16
#=GS A4I3F8/17-92      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS A0A2V2WDM1/18-92  AC A0A2V2WDM1
#=GS A0A2V2WDM1/18-92  OS Trypanosoma cruzi
#=GS A0A2V2WDM1/18-92  DE Mitochondrial RNA binding protein
#=GS A0A2V2WDM1/18-92  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Schizotrypanum; Trypanosoma cruzi; 
#=GS A4HGC6/17-92      AC A4HGC6
#=GS A4HGC6/17-92      OS Leishmania braziliensis
#=GS A4HGC6/17-92      DE Putative RNA binding protein rbp16
#=GS A4HGC6/17-92      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GS E9BKC8/17-92      AC E9BKC8
#=GS E9BKC8/17-92      OS Leishmania donovani BPK282A1
#=GS E9BKC8/17-92      DE RNA binding protein rbp16, putative
#=GS E9BKC8/17-92      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GF SQ 22
H0Y449/117-190            ----------------------PSRADLEKDSWNDTKEDVFVHQTAIKKNNPRK-YLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA
G5EDV3/85-171             -------IETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIVEGLKGPEAANVTGPDGENVRGSR---
P91306/55-138             EQKSKTAITTGLQGKVKWYSVLRRYGFISR---NDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDLVEGKNGPEAANVTGPNG----------
Q384M8/17-92              ----------LNKGKVISWMSGRGFGFIED---DADKKQHFVHFSALQTETG---GFRALTVGQEVEFEVASQDGRTRAENVTSPGGAKLPS-----
Q4Q8I6/17-92              ----------LNTGKVVSWMSGRGFGFIED---NADKKQHFVHFSALQTETG---GYRALAVDQEVEFEVASQDGRTRAENVTAPGGGKLPS-----
P91398/61-146             --------TAGLQGKVKWYSVLRRYGFISR---SDGEKDVFVHQTAISKSDTEKFYLRTLADEEEVLFDLVDGKNGPEAANVTGPAGVNVSGSKYRH
Q4DCA9/18-92              -----------NKGKVISWMSGRGFGFIED---DTDKKQHFVHFSALQTETG---GFRSLTVGQEVEFEVASQDGRTRAENVTAPGGSKLPS-----
A0A0N0VHA5/17-92          ----------LNTGKVISWMSGRGFGFVED---DADKKQHFVHFSALQTETG---GYRAVAVGQEVEFEVATQDGRTRAENVTAPGGAKLPS-----
A0A1X0NZ24/17-92          ----------FNKGKVISWMSGRGFGFIED---DADKKQHFVHFSALQTETG---GFRALTVGQEVEFEVASQDGRTRAENVTSPGGAKLPS-----
G0UC31/18-92              -----------NRGKVISWMSGRGFGFIED---EADKKQHFVHFSALQTETG---GFRSLTVGQEVEFEVASQDGRTRAENVTSPGGAKLPS-----
A0A1G4IGK0/17-92          ----------LNKGKVISWMSGRGFGFIED---DADKKQHFVHFSALQTETG---GFRALTVGQEVEFEVASQDGRTRAENVTSPGGAKLPS-----
A0A3P3ZAR5/17-92          ----------LNTGKVVSWMSGRGFGFIED---NADKKQHFVHFSALQTETG---GYRALAVDQEVEFEVASQDGRTRAENVTAPGGAKLPS-----
Q9XY40/17-92              ----------LNKGKVISWMSGRGFGFIED---DADKKQHFVHFSALQTETG---GFRALTVGQEVEFEVASQDGRTRAENVTSPGGAKLPS-----
D0A7Y1/17-92              ----------LNKGKVISWMSGRGFGFIED---DADKKQHFVHFSALQTETG---GFRALTVGQEVEFEVASQDGRTRAENVTSPGGAKLPS-----
A0A088SDB5/17-92          ----------LNTGKVVSWMSGRGFGFIED---NADKKQHFVHFSALQTETG---GYRALAVDQEVEFEVASQDGRTRAENVTAPGGAKLPS-----
A0A3S7X1B7/17-92          ----------LNTGKVVSWMSGRGFGFIED---NADKRQHFVHFSALQTETG---GYRALAVDQEVEFEVASQDGRTRAENVTAPGGGKLPS-----
E9AZP7/17-92              ----------LNTGKVVSWMSGRGFGFIED---NADKRQHFVHFSALQTETG---GYRALAVDQEVEFEVASQDGRTRAENVTAPGGGKLPS-----
A0A1E1J012/17-92          ----------LNTGKVVSWMSGRGFGFIED---NADKKQHFVHFSALQTETG---GYRALAVDQEVEFEVASQDGRTRAENVTAPGGAKLPS-----
A4I3F8/17-92              ----------LNTGKVVSWMSGRGFGFIED---NADKRQHFVHFSALQTETG---GYRALAVDQEVEFEVASQDGRTRAENVTAPGGGKLPS-----
A0A2V2WDM1/18-92          -----------NKGKVISWMSGRGFGFIED---DTDKKQHFVHFSALQTETG---GFRSLTVGQEVEFEVASQDGRTRAENVTAPGGSKLPS-----
A4HGC6/17-92              ----------LNTGKVVSWMSGRGFGFIED---NADKKQHFVHFSALQTETG---GYRALAVDQEVEFEVASQDGRTRAENVTAPGGAKLPS-----
E9BKC8/17-92              ----------LNTGKVVSWMSGRGFGFIED---NADKRQHFVHFSALQTETG---GYRALAVDQEVEFEVASQDGRTRAENVTAPGGGKLPS-----
#=GC scorecons            0000000000233656334443655767550005556654999469645555010459574456694976655455559599959593454400000
#=GC scorecons_70         _____________*_*______*__***____________***__**__________*_*___*_*_***________*_***_*_*__________
#=GC scorecons_80         _________________________*______________***__*___________*_*_____*_*__________*_***_*_*__________
#=GC scorecons_90         ________________________________________***__*___________*_______*_*__________*_***_*_*__________
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