# STOCKHOLM 1.0
#=GF ID 2.40.50.140/FF/000259
#=GF DE RNA polymerase Rpb7 N-terminal domain-containing protein
#=GF AC 2.40.50.140/FF/000259
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 39.757
#=GS Q84NN3/80-188      AC Q84NN3
#=GS Q84NN3/80-188      OS Oryza sativa Japonica Group
#=GS Q84NN3/80-188      DE Os07g0477000 protein
#=GS Q84NN3/80-188      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS M7YFR8/68-180      AC M7YFR8
#=GS M7YFR8/68-180      OS Triticum urartu
#=GS M7YFR8/68-180      DE DNA-directed RNA polymerase III subunit RPC8
#=GS M7YFR8/68-180      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum urartu; 
#=GS A0A0A9QC17/80-194  AC A0A0A9QC17
#=GS A0A0A9QC17/80-194  OS Arundo donax
#=GS A0A0A9QC17/80-194  DE Uncharacterized protein
#=GS A0A0A9QC17/80-194  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Arundinoideae; Arundineae; Arundo; Arundo donax; 
#=GS A0A1D6IA49/80-193  AC A0A1D6IA49
#=GS A0A1D6IA49/80-193  OS Zea mays
#=GS A0A1D6IA49/80-193  DE RNA polymerase Rpb7 N-terminal domain-containing protein
#=GS A0A1D6IA49/80-193  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS I1GUK3/80-194      AC I1GUK3
#=GS I1GUK3/80-194      OS Brachypodium distachyon
#=GS I1GUK3/80-194      DE Uncharacterized protein
#=GS I1GUK3/80-194      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A287SH81/80-193  AC A0A287SH81
#=GS A0A287SH81/80-193  OS Hordeum vulgare subsp. vulgare
#=GS A0A287SH81/80-193  DE Uncharacterized protein
#=GS A0A287SH81/80-193  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Hordeinae; Hordeum; Hordeum vulgare; Hordeum vulgare subsp. vulgare; 
#=GS C5X8I0/80-194      AC C5X8I0
#=GS C5X8I0/80-194      OS Sorghum bicolor
#=GS C5X8I0/80-194      DE Uncharacterized protein
#=GS C5X8I0/80-194      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; 
#=GS A0A453RHK7/80-193  AC A0A453RHK7
#=GS A0A453RHK7/80-193  OS Aegilops tauschii subsp. strangulata
#=GS A0A453RHK7/80-193  DE Uncharacterized protein
#=GS A0A453RHK7/80-193  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; Aegilops tauschii subsp. strangulata; 
#=GS A0A0D3GQX9/80-188  AC A0A0D3GQX9
#=GS A0A0D3GQX9/80-188  OS Oryza barthii
#=GS A0A0D3GQX9/80-188  DE Uncharacterized protein
#=GS A0A0D3GQX9/80-188  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; 
#=GS A0A0E0Q848/80-188  AC A0A0E0Q848
#=GS A0A0E0Q848/80-188  OS Oryza rufipogon
#=GS A0A0E0Q848/80-188  DE Uncharacterized protein
#=GS A0A0E0Q848/80-188  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; 
#=GS A0A3B6LTZ0/80-193  AC A0A3B6LTZ0
#=GS A0A3B6LTZ0/80-193  OS Triticum aestivum
#=GS A0A3B6LTZ0/80-193  DE Uncharacterized protein
#=GS A0A3B6LTZ0/80-193  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum aestivum; 
#=GS A0A446XBK9/80-192  AC A0A446XBK9
#=GS A0A446XBK9/80-192  OS Triticum turgidum subsp. durum
#=GS A0A446XBK9/80-192  DE Uncharacterized protein
#=GS A0A446XBK9/80-192  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum turgidum; Triticum turgidum subsp. durum; 
#=GS A0A0E0I0P7/80-188  AC A0A0E0I0P7
#=GS A0A0E0I0P7/80-188  OS Oryza sativa f. spontanea
#=GS A0A0E0I0P7/80-188  DE Uncharacterized protein
#=GS A0A0E0I0P7/80-188  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; 
#=GS M8ATE1/143-251     AC M8ATE1
#=GS M8ATE1/143-251     OS Aegilops tauschii
#=GS M8ATE1/143-251     DE DNA-directed RNA polymerase III subunit RPC8
#=GS M8ATE1/143-251     DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; 
#=GS B8B5Z9/80-188      AC B8B5Z9
#=GS B8B5Z9/80-188      OS Oryza sativa Indica Group
#=GS B8B5Z9/80-188      DE Uncharacterized protein
#=GS B8B5Z9/80-188      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS A0A3B6RDY6/80-192  AC A0A3B6RDY6
#=GS A0A3B6RDY6/80-192  OS Triticum aestivum
#=GS A0A3B6RDY6/80-192  DE Uncharacterized protein
#=GS A0A3B6RDY6/80-192  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum aestivum; 
#=GS A0A3B6KQC1/80-193  AC A0A3B6KQC1
#=GS A0A3B6KQC1/80-193  OS Triticum aestivum
#=GS A0A3B6KQC1/80-193  DE Uncharacterized protein
#=GS A0A3B6KQC1/80-193  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum aestivum; 
#=GS A0A446TGK6/80-193  AC A0A446TGK6
#=GS A0A446TGK6/80-193  OS Triticum turgidum subsp. durum
#=GS A0A446TGK6/80-193  DE Uncharacterized protein
#=GS A0A446TGK6/80-193  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum turgidum; Triticum turgidum subsp. durum; 
#=GS A0A3B6SI20/80-193  AC A0A3B6SI20
#=GS A0A3B6SI20/80-193  OS Triticum aestivum
#=GS A0A3B6SI20/80-193  DE Uncharacterized protein
#=GS A0A3B6SI20/80-193  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum aestivum; 
#=GS A0A446YBF4/80-193  AC A0A446YBF4
#=GS A0A446YBF4/80-193  OS Triticum turgidum subsp. durum
#=GS A0A446YBF4/80-193  DE Uncharacterized protein
#=GS A0A446YBF4/80-193  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum turgidum; Triticum turgidum subsp. durum; 
#=GS A0A3B6TQ31/80-193  AC A0A3B6TQ31
#=GS A0A3B6TQ31/80-193  OS Triticum aestivum
#=GS A0A3B6TQ31/80-193  DE Uncharacterized protein
#=GS A0A3B6TQ31/80-193  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum aestivum; 
#=GS C4J192/80-194      AC C4J192
#=GS C4J192/80-194      OS Zea mays
#=GS C4J192/80-194      DE RNA polymerase Rpb7 N-terminal domain-containing protein
#=GS C4J192/80-194      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6IA48/59-173  AC A0A1D6IA48
#=GS A0A1D6IA48/59-173  OS Zea mays
#=GS A0A1D6IA48/59-173  DE RNA polymerase Rpb7 N-terminal domain-containing protein
#=GS A0A1D6IA48/59-173  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS I1J3A6/80-188      AC I1J3A6
#=GS I1J3A6/80-188      OS Brachypodium distachyon
#=GS I1J3A6/80-188      DE Uncharacterized protein
#=GS I1J3A6/80-188      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A3B6MZ38/80-188  AC A0A3B6MZ38
#=GS A0A3B6MZ38/80-188  OS Triticum aestivum
#=GS A0A3B6MZ38/80-188  DE Uncharacterized protein
#=GS A0A3B6MZ38/80-188  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Triticum; Triticum aestivum; 
#=GS A0A453LWF3/80-188  AC A0A453LWF3
#=GS A0A453LWF3/80-188  OS Aegilops tauschii subsp. strangulata
#=GS A0A453LWF3/80-188  DE Uncharacterized protein
#=GS A0A453LWF3/80-188  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; Aegilops tauschii subsp. strangulata; 
#=GF SQ 26
Q84NN3/80-188              FVGEVLVGKISGYDEKGLHVSLDFFSDISIPGHLMQYGTARALDGRWMLKTEDGDELYLDLDDEIRFLVSSIKYPPIPVEQKETDRAFAPMQIIGSIKGDGLGLLAWWA------
M7YFR8/68-180              FIGEVLVGKISGYDEKGLQVSLDFFTDICIPGHLMQFGTVRGEDGRWALKTEDGDELHLDIDDEIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWAAVEG--
A0A0A9QC17/80-194          FTGEVLVGKISGYDDKGLQVSLDFFSDICIPGHLMQYGTMRGPDGRWMLKTEDGDELYLDLDDEIRFLVSSIKYPPIPVEQKEDDPPFAPMQIVGSIKGDGLGLLAWWAADEEEG
A0A1D6IA49/80-193          FNGEILVGRITGYDDKGLQVSLEFFSDICIPGHLMQFGTVRGPDGRWMLKTELGDELYLDLDDEIRFLVSSTKYPPIPIDQNEDDPPFAPMQI-GSIKGDGLGLLVWWAADEEEG
I1GUK3/80-194              FIGEVLVGKISGYDEKGLQVSLDFFSDICIPGHLMQYGTVRGEDGRWMLKTDDGDELYLDIDDEIRFLVSGIKYPPIPVEQKEDDKPFAPMQIIGSIKGDGLGLLAWWAADEEEA
A0A287SH81/80-193          FIGEVLVGKISGYDEKGLQVSLDFFSDICIPGHLMQFGTVRGEDGRWALKTEDGDELPLDIDDEIRFLVSSIKYPPIPVEQKEDDRPFAPMQINGSIKGDGLGLLAWWAPDEEE-
C5X8I0/80-194              FNGEVLVGRIIGYDDKGLQVSLDFFSDISIPGHLMQFGTVRGPDGRWMLKTEDGDELYLDLDDEIRFLVSSTKYPRIPIDQKEDDPPFAPMQIVGSIKGDGLGLLAWWAADEEEG
A0A453RHK7/80-193          FIGEVLVGKISGYDEKGLQVSLDFFTDICIPGHLMQFGTVRGEDGRWALKTEDGDELHLDIDDEIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWVAEEGE-
A0A0D3GQX9/80-188          FVGEVLVGKISGYDEKGLHVSLDFFSDISIPGHLMQYGTARALDGRWMLKTEDGDELYLDLDDEIRFLVSSIKYPPIPVEQKETDRAFAPMQIIGSIKGDGLGLLAWWA------
A0A0E0Q848/80-188          FVGEVLVGKISGYDEKGLHVSLDFFSDISIPGHLMQYGTARALDGRWMLKTEDGDELYLDLDDEIRFLVSSIKYPPIPVEQKETDRAFAPMQIIGSIKGDGLGLLAWWA------
A0A3B6LTZ0/80-193          FIGEVLVGKISGYDEKGLQVSLDFFSDICIPGHLMQFGTVRGEDGRWALKTEDGDELHLDIDDEIRFLVSSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWAAGEEE-
A0A446XBK9/80-192          FIGEVLVGKISGYDEKGLQVSLDFFTDICIPGHLMQFGTVRGEDGRWALKTEDGDELHLDIDDEIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWAAVEG--
A0A0E0I0P7/80-188          FVGEVLVGKISGYDEKGLHVSLDFFSDISIPGHLMQYGTARALDGRWMLKTEDGDELYLDLDDEIRFLVSSIKYPPIPVEQKETDRAFAPMQIIGSIKGDGLGLLAWWA------
M8ATE1/143-251             FIGEVLVGKISGYDEKGLQVSLDFFSDICIPGHLMQFGTVRGEDGRWALKTEDGDELHLDTDDEIRFLVSSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWA------
B8B5Z9/80-188              FVGEVLVGKISGYDEKGLHVSLDFFSDISIPGHLMQYGTARALDGRWMLKTEDGDELYLDLDDEIRFLVSSIKYPPIPVEQKETDRAFAPMQIIGSIKGDGLGLLAWWA------
A0A3B6RDY6/80-192          FIGEVLVGKISGYDEKGLQVSLDFFTDICIPGHLMQFGTVRGEDGRWALKTEDGDELHLDIDDEIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWAAVEG--
A0A3B6KQC1/80-193          FIGEVLVGKISGYDEKGLQVSLDFFSDICIPGHLMQIGTVRGEDGRWALKTEDGDELHLDIDDEIRFLVSSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLIAWWAAGEEE-
A0A446TGK6/80-193          FIGEVLVGKISGYDEKGLQVSLDFFSDICIPGHLMQIGTVRGEDGRWALKTEDGDELHLDIDDEIRFLVSSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLIAWWAAGEEE-
A0A3B6SI20/80-193          FIGEVLVGKISGYDEKGLQVSLDFFTDICIPGHLMQFGTVRGEDGRWALKTEDGDELHLDIDDEIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWAAEEGE-
A0A446YBF4/80-193          FIGEVLVGKISGYDEKGLQVSLDFFTDICIPGHLMQFGTVRGEDGRWALKTEDGDELHLDIDDEIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWAAEEGE-
A0A3B6TQ31/80-193          FIGEVLVGKISGYDEKGLQVSLDFFTDICIPGHLMQFGTVRGEDGRWALKTEDGDELHLDIDDEIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWVAEEGE-
C4J192/80-194              FNGEILVGRITGYDDKGLQVSLEFFSDICIPGHLMQFGTVRGPDGRWMLKTELGDELYLDLDDEIRFLVSSTKYPPIPIDQNEDDPPFAPMQIVGSIKGDGLGLLVWWAADEEEG
A0A1D6IA48/59-173          FNGEILVGRITGYDDKGLQVSLEFFSDICIPGHLMQFGTVRGPDGRWMLKTELGDELYLDLDDEIRFLVSSTKYPPIPIDQNEDDPPFAPMQIVGSIKGDGLGLLVWWAADEEEG
I1J3A6/80-188              FIGEVLVGKISGYDEKGLQVSLDFSSDICIPGHLMQYGTVRGEDGRWMLKTEDDDELYLDLDDEIRFLVASIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWA------
A0A3B6MZ38/80-188          FIGEVLVGKISGYDEKGLQVSLDFFSDICIPGHLMQFGTVRGEDGRWALKTEDGDELHLDTDDEIRFLVSSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWA------
A0A453LWF3/80-188          FIGEVLVGKISGYDEKGLQVSLDFFSDICIPGHLMQFGTVRGEDGRWALKTEDGDELHLDTDDEIRFLVSSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWA------
#=GC scorecons             9599799979699979997999798799699999996996974999959998689996995999999978879998997797969579999994999999999987998313220
#=GC scorecons_70          *_****************************************_****_************_************************_*******_***************______
#=GC scorecons_80          *_********_**************_**_*******_**_*__****_****_****_**_*******_**_***********_*__******_***************______
#=GC scorecons_90          *_**_***_*_***_***_***_**_**_*******_**_*__****_****_****_**_*******_**_******__*_*_*__******_***********_***______
//