# STOCKHOLM 1.0
#=GF ID 2.40.50.100/FF/000073
#=GF DE Putative Exosome complex component RRP40
#=GF AC 2.40.50.100/FF/000073
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 91.459
#=GS D6WZ05/3-58       AC D6WZ05
#=GS D6WZ05/3-58       OS Tribolium castaneum
#=GS D6WZ05/3-58       DE Exosome complex component RRP40-like Protein
#=GS D6WZ05/3-58       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS T1G7L8/3-62       AC T1G7L8
#=GS T1G7L8/3-62       OS Helobdella robusta
#=GS T1G7L8/3-62       DE Uncharacterized protein
#=GS T1G7L8/3-62       DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS Q7SHW1/3-65       AC Q7SHW1
#=GS Q7SHW1/3-65       OS Neurospora crassa OR74A
#=GS Q7SHW1/3-65       DE Exosome complex exonuclease RRP40
#=GS Q7SHW1/3-65       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GS H3HBE3/176-239    AC H3HBE3
#=GS H3HBE3/176-239    OS Phytophthora ramorum
#=GS H3HBE3/176-239    DE Uncharacterized protein
#=GS H3HBE3/176-239    DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS G4ZU77/195-258    AC G4ZU77
#=GS G4ZU77/195-258    OS Phytophthora sojae strain P6497
#=GS G4ZU77/195-258    DE Uncharacterized protein
#=GS G4ZU77/195-258    DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora sojae; 
#=GS A0A3R7NHZ5/36-99  AC A0A3R7NHZ5
#=GS A0A3R7NHZ5/36-99  OS Phytophthora kernoviae
#=GS A0A3R7NHZ5/36-99  DE Uncharacterized protein
#=GS A0A3R7NHZ5/36-99  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora kernoviae; 
#=GS A0A178B655/1-63   AC A0A178B655
#=GS A0A178B655/1-63   OS Stagonospora sp. SRC1lsM3a
#=GS A0A178B655/1-63   DE Uncharacterized protein
#=GS A0A178B655/1-63   DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Massarineae; Massarinaceae; Stagonospora; Stagonospora sp. SRC1lsM3a; 
#=GS A7EVC1/1-63       AC A7EVC1
#=GS A7EVC1/1-63       OS Sclerotinia sclerotiorum 1980 UF-70
#=GS A7EVC1/1-63       DE Uncharacterized protein
#=GS A7EVC1/1-63       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum; 
#=GS Q0V6L0/1-63       AC Q0V6L0
#=GS Q0V6L0/1-63       OS Parastagonospora nodorum SN15
#=GS Q0V6L0/1-63       DE Uncharacterized protein
#=GS Q0V6L0/1-63       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum; 
#=GS G2Y9Q3/1-63       AC G2Y9Q3
#=GS G2Y9Q3/1-63       OS Botrytis cinerea T4
#=GS G2Y9Q3/1-63       DE Similar to exosome complex exonuclease Rrp40
#=GS G2Y9Q3/1-63       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis; Botrytis cinerea; 
#=GS W9CIB5/1-63       AC W9CIB5
#=GS W9CIB5/1-63       OS Sclerotinia borealis F-4128
#=GS W9CIB5/1-63       DE Putative Exosome complex component RRP40
#=GS W9CIB5/1-63       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia borealis; 
#=GS F7VQM1/3-65       AC F7VQM1
#=GS F7VQM1/3-65       OS Sordaria macrospora k-hell
#=GS F7VQM1/3-65       DE WGS project CABT00000000 data, contig 2.4
#=GS F7VQM1/3-65       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Sordaria; Sordaria macrospora; 
#=GS G4U7W9/3-65       AC G4U7W9
#=GS G4U7W9/3-65       OS Neurospora tetrasperma FGSC 2509
#=GS G4U7W9/3-65       DE Uncharacterized protein
#=GS G4U7W9/3-65       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora tetrasperma; 
#=GS A0A384JIV9/1-63   AC A0A384JIV9
#=GS A0A384JIV9/1-63   OS Botrytis cinerea B05.10
#=GS A0A384JIV9/1-63   DE Bcrrp40
#=GS A0A384JIV9/1-63   DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis; Botrytis cinerea; 
#=GS A0A1D9QLN4/1-63   AC A0A1D9QLN4
#=GS A0A1D9QLN4/1-63   OS Sclerotinia sclerotiorum 1980 UF-70
#=GS A0A1D9QLN4/1-63   DE Uncharacterized protein
#=GS A0A1D9QLN4/1-63   DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum; 
#=GS M7U7K2/1-63       AC M7U7K2
#=GS M7U7K2/1-63       OS Botrytis cinerea BcDW1
#=GS M7U7K2/1-63       DE Putative exosome complex exonuclease rrp40 protein
#=GS M7U7K2/1-63       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis; Botrytis cinerea; 
#=GS F8N4S4/3-65       AC F8N4S4
#=GS F8N4S4/3-65       OS Neurospora tetrasperma FGSC 2508
#=GS F8N4S4/3-65       DE Uncharacterized protein
#=GS F8N4S4/3-65       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora tetrasperma; 
#=GS A0A0B0EG74/3-65   AC A0A0B0EG74
#=GS A0A0B0EG74/3-65   OS Neurospora crassa
#=GS A0A0B0EG74/3-65   DE Uncharacterized protein
#=GS A0A0B0EG74/3-65   DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GF SQ 18
D6WZ05/3-58               ------VFPGDVVKDV--KS---VKGVTVLGPGVAP-DGSTVRVTRAGRLHA-KPPNTYWVEHDQKRYV
T1G7L8/3-62               AKVGDFVMPGDIACVD-------QSGVCLLGPGLRG-KNDIIYATIPGILRE-NKPALYWVDSRQKRYV
Q7SHW1/3-65               SESPLVVLPGETIDPSLIPTH--KKNPLRLGPGLRHIPPSEIVPTVAGQLVVDHRKTSMWIEYNG----
H3HBE3/176-239            LFSSVVVLPGDDVTATLTKT---TRRVKL-GAGLKQLPDERIVCTNAGVLRY-RPANRYWVEFNHKRYV
G4ZU77/195-258            LFSSVVVLPGDDVTATLTKT---TRRVKL-GAGLKQLPDERIVCTNAGVLRY-RPANRYWVEFNHKRYV
A0A3R7NHZ5/36-99          -FSSVVVLPGDDVTATLTKT---TRRVKLAGTGLRQLPDERIVCTNAGVLRY-RPANRYWVEFNHKRYV
A0A178B655/1-63           --MATLVLPGDEIPSSLLPTGTGKRKTLKLGPGLRHIPPNTVVTTVAGALVTDDRKNAASVETNS----
A7EVC1/1-63               MSTETFVLPGDHIAPELLPSH--PSLPLKLGPGLRHIPPNTITSTVAGQLQTDSRKNAIWVEFNA----
Q0V6L0/1-63               --MATLVLPGDEIPPHALPTGTGKRKTLKLGPGLRHIPPSTVVTTVAGALVTDNKKNAASVETNS----
G2Y9Q3/1-63               MSTETFVLPGDHIASELLPSH--PSLPLKLGPGLRHIPPNTITSTVAGQLRTDSRKNAVWVEFNA----
W9CIB5/1-63               MSTEIFVLPGDHIAPELLPSH--PSLPLKVGPGLRHIPPNTITPTVAGQLRTDSRKNAIWVEFNA----
F7VQM1/3-65               TESPLVVLPGEAIDPSLIPTH--KKNPLRLGPGLRHIPPSEIVPTVAGQLVVDHRKTSMWIEYNG----
G4U7W9/3-65               TESPLVVLPGETIDPSLIPTH--KKNPLRLGPGLRHIPPSEIVPTVAGQLVVDHRKTSMWIEYNG----
A0A384JIV9/1-63           MSTETFVLPGDHIASELLPSH--PSLPLKLGPGLRHIPPNTITSTVAGQLRTDSRKNAVWVEFNA----
A0A1D9QLN4/1-63           MSTETFVLPGDHIAPELLPSH--PSLPLKLGPGLRHIPPNTITSTVAGQLQTDSRKNAIWVEFNA----
M7U7K2/1-63               MSTETFVLPGDHIASELLPSH--PSLPLKLGPGLRHIPPNTITSTVAGQLRTDSRKNAVWVEFNA----
F8N4S4/3-65               TESPLVVLPGETIDPSLIPTH--KKNPLRLGPGLRHIPPSEIVPTVAGQLVVDHRKTSMWIEYNG----
A0A0B0EG74/3-65           SESPLVVLPGETIDPSLIPTH--KKNPLRLGPGLRHIPPSEIVPTVAGQLVVDHRKTSMWIEYNG----
#=GC scorecons            224334979973634353452003435445979875465447439589494334556437785731111
#=GC scorecons_70         ______*****_*_________________*****__*___*__*_**_*_________***_*_____
#=GC scorecons_80         ______*****___________________*_**_______*__*_**_*_________***_*_____
#=GC scorecons_90         ______*_**____________________*_**__________*__*_*___________*_______
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