# STOCKHOLM 1.0
#=GF ID 2.40.40.20/FF/000033
#=GF DE DNA-directed RNA polymerase subunit
#=GF AC 2.40.40.20/FF/000033
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 56.326
#=GS E2RTQ5/334-374_452-531      AC E2RTQ5
#=GS E2RTQ5/334-374_452-531      OS Giardia lamblia ATCC 50803
#=GS E2RTQ5/334-374_452-531      DE DNA-directed RNA polymerase subunit
#=GS E2RTQ5/334-374_452-531      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS A2DEX5/324-365_428-507      AC A2DEX5
#=GS A2DEX5/324-365_428-507      OS Trichomonas vaginalis
#=GS A2DEX5/324-365_428-507      DE DNA-directed RNA polymerase subunit
#=GS A2DEX5/324-365_428-507      DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A0C1F3/316-356_417-496      AC A0C1F3
#=GS A0C1F3/316-356_417-496      OS Paramecium tetraurelia
#=GS A0C1F3/316-356_417-496      DE DNA-directed RNA polymerase subunit
#=GS A0C1F3/316-356_417-496      DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS Q8MUU2/334-374_452-531      AC Q8MUU2
#=GS Q8MUU2/334-374_452-531      OS Giardia intestinalis
#=GS Q8MUU2/334-374_452-531      DE DNA-directed RNA polymerase subunit
#=GS Q8MUU2/334-374_452-531      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS E1EW62/334-374_452-531      AC E1EW62
#=GS E1EW62/334-374_452-531      OS Giardia lamblia P15
#=GS E1EW62/334-374_452-531      DE DNA-directed RNA polymerase subunit
#=GS E1EW62/334-374_452-531      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS V6U035/334-374_452-531      AC V6U035
#=GS V6U035/334-374_452-531      OS Giardia intestinalis
#=GS V6U035/334-374_452-531      DE DNA-directed RNA polymerase subunit
#=GS V6U035/334-374_452-531      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS V6TIA7/334-374_452-531      AC V6TIA7
#=GS V6TIA7/334-374_452-531      OS Giardia intestinalis
#=GS V6TIA7/334-374_452-531      DE DNA-directed RNA polymerase subunit
#=GS V6TIA7/334-374_452-531      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS C6LVP9/334-374_452-531      AC C6LVP9
#=GS C6LVP9/334-374_452-531      OS Giardia intestinalis ATCC 50581
#=GS C6LVP9/334-374_452-531      DE DNA-directed RNA polymerase subunit
#=GS C6LVP9/334-374_452-531      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS A0A132NVH2/334-374_452-531  AC A0A132NVH2
#=GS A0A132NVH2/334-374_452-531  OS Giardia intestinalis assemblage B
#=GS A0A132NVH2/334-374_452-531  DE DNA-directed RNA polymerase subunit
#=GS A0A132NVH2/334-374_452-531  DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS A0CQY5/316-356_417-496      AC A0CQY5
#=GS A0CQY5/316-356_417-496      OS Paramecium tetraurelia
#=GS A0CQY5/316-356_417-496      DE DNA-directed RNA polymerase subunit
#=GS A0CQY5/316-356_417-496      DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS Q3SE62/316-356_417-496      AC Q3SE62
#=GS Q3SE62/316-356_417-496      OS Paramecium tetraurelia
#=GS Q3SE62/316-356_417-496      DE DNA-directed RNA polymerase subunit
#=GS Q3SE62/316-356_417-496      DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GF SQ 11
E2RTQ5/334-374_452-531              -GRMRSNLMGKRVNYCSRSVITGDPTISINELGVPRSVASRLHLLDGDYVLFNRQPTLHKSSFMGHRVKVLPYSTYRLNLSATSSYNADFDGDEMNLHALQSLEAVAEISELCMVSNQVVSV
A2DEX5/324-365_428-507              QGRFRTNLSGKRVNYSGRTVISPDPNVNVDQVVIPVSMAKILHLLDNDTVLFNRQPSLHRISIMGFRAKVMEWCTMRFNESVCAPFNADFDGDEMNVHLPQTLEAAADARYLMNVLYNLFSP
A0C1F3/316-356_417-496              -GRLRGNLSGKRAEFTARSVISPDPNLAIDQVTIPQHIACILHLLSEDIVIFNRQPSLHRISMMAFRARVDKWHTLRFNECVCTPFNADFDGDEMNIHLPQTYEARSEALILMDVKKNLKTI
Q8MUU2/334-374_452-531              -GRMRSNLMGKRVNYCSRSVITGDPTISINELGVPRSVASRLHLLDGDYVLFNRQPTLHKSSFMGHRVKVLPYSTYRLNLSATSSYNADFDGDEMNLHALQSLEAVAEISELCMVSNQVVSV
E1EW62/334-374_452-531              -GRMRSNLMGKRVNYCSRSVITGDPTISINELGVPRSVASRLHLLDGDYVLFNRQPTLHKSSFMGHRVKVLPYSTYRLNLSATSSYNADFDGDEMNLHALQSLEAVAEISELCMVSNQVVSV
V6U035/334-374_452-531              -GRMRSNLMGKRVNYCSRSVITGDPTISINELGVPRSVASRLHLLDGDYVLFNRQPTLHKSSFMGHRVRVLPYSTYRLNLSATSSYNADFDGDEMNLHALQSLEAVAEISELCMVSNQVVSV
V6TIA7/334-374_452-531              -GRMRSNLMGKRVNYCSRSVITGDPTISINELGVPRSVASRLHLLDGDYVLFNRQPTLHKSSFMGHRVKVLPYSTYRLNLSATSSYNADFDGDEMNLHALQSLEAVAEISELCMVSNQVVSV
C6LVP9/334-374_452-531              -GRMRSNLMGKRVNYCSRSVITGDPTISINELGVPRSVASRLHLLDGDYVLFNRQPTLHKSSFMGHRVRVLPYSTYRLNLSATSSYNADFDGDEMNLHALQSLEAVAEISELCMVSNQVVSV
A0A132NVH2/334-374_452-531          -GRMRSNLMGKRVNYCSRSVITGDPTISINELGVPRSVASRLHLLDGDYVLFNRQPTLHKSSFMGHRVRVLPYSTYRLNLSATSSYNADFDGDEMNLHALQSLEAVAEISELCMVSNQVVSV
A0CQY5/316-356_417-496              -GRLRGNLSGKRAEFTARSVISPDPNLAIDQVTIPQHIACILHLLSEDIVIFNRQPSLHRISMMAFRARVDKWHTLRFNECVCTPFNADFDGDEMNIHLPQTYEARSEALILMDVKKNLKTI
Q3SE62/316-356_417-496              -GRLRGNLSGKRAEFTARSVISPDPNLAIDQVTIPQHIACILHLLSEDIVIFNRQPSLHRISMMAFRARVDKWHTLRFNECVCTPFNADFDGDEMNIHLPQTYEARSEALILMDVKKNLKTI
#=GC scorecons                      09959599599966745979965996558666479456944999955949699999699759596596794454949694665567999999999959559659946854395494456365
#=GC scorecons_70                   _**_*_**_***__*__****__**___****_**__**__****__*_*******_***_*_*__*_**____*_***______***********_*__*__**__*___*__*___*___
#=GC scorecons_80                   _**_*_**_***__*__****__**___*_____*___*__****__*_*_*****_**__*_*__*__*____*_*_*______***********_*__*__**__*___*__*_______
#=GC scorecons_90                   _**_*_**_***_____*_**__**_________*___*__****__*_*_*****_**__*_*__*__*____*_*_*_______**********_*__*__**______*__*_______
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