# STOCKHOLM 1.0
#=GF ID 2.40.30.230/FF/000005
#=GF DE Regulator of nonsense transcripts 1 homolog
#=GF AC 2.40.30.230/FF/000005
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 50.984
#=GS W4XXQ3/376-464      AC W4XXQ3
#=GS W4XXQ3/376-464      OS Strongylocentrotus purpuratus
#=GS W4XXQ3/376-464      DE Uncharacterized protein
#=GS W4XXQ3/376-464      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS H3G5R3/233-323      AC H3G5R3
#=GS H3G5R3/233-323      OS Phytophthora ramorum
#=GS H3G5R3/233-323      DE Uncharacterized protein
#=GS H3G5R3/233-323      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS M4C1P1/321-411      AC M4C1P1
#=GS M4C1P1/321-411      OS Hyaloperonospora arabidopsidis Emoy2
#=GS M4C1P1/321-411      DE Uncharacterized protein
#=GS M4C1P1/321-411      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis; 
#=GS A0A0P1A4W0/300-390  AC A0A0P1A4W0
#=GS A0A0P1A4W0/300-390  OS Plasmopara halstedii
#=GS A0A0P1A4W0/300-390  DE Regulator of nonsense transcripts 1 homolog
#=GS A0A0P1A4W0/300-390  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Plasmopara; Plasmopara halstedii; 
#=GS W2L3E7/320-410      AC W2L3E7
#=GS W2L3E7/320-410      OS Phytophthora parasitica
#=GS W2L3E7/320-410      DE Uncharacterized protein
#=GS W2L3E7/320-410      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A0W8CKT1/320-410  AC A0A0W8CKT1
#=GS A0A0W8CKT1/320-410  OS Phytophthora nicotianae
#=GS A0A0W8CKT1/320-410  DE Regulator of nonsense transcripts 1
#=GS A0A0W8CKT1/320-410  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS A0A329RJL4/320-410  AC A0A329RJL4
#=GS A0A329RJL4/320-410  OS Phytophthora cactorum
#=GS A0A329RJL4/320-410  DE Regulator of nonsense transcripts 1
#=GS A0A329RJL4/320-410  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora cactorum; 
#=GS A0A421GW28/391-481  AC A0A421GW28
#=GS A0A421GW28/391-481  OS Phytophthora kernoviae
#=GS A0A421GW28/391-481  DE Uncharacterized protein
#=GS A0A421GW28/391-481  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora kernoviae; 
#=GS A0A081A2X6/320-410  AC A0A081A2X6
#=GS A0A081A2X6/320-410  OS Phytophthora parasitica P1976
#=GS A0A081A2X6/320-410  DE Uncharacterized protein
#=GS A0A081A2X6/320-410  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2Z8E0/320-410      AC W2Z8E0
#=GS W2Z8E0/320-410      OS Phytophthora parasitica P10297
#=GS W2Z8E0/320-410      DE Uncharacterized protein
#=GS W2Z8E0/320-410      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2Q3V4/320-410      AC W2Q3V4
#=GS W2Q3V4/320-410      OS Phytophthora parasitica INRA-310
#=GS W2Q3V4/320-410      DE Uncharacterized protein
#=GS W2Q3V4/320-410      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS V9F2N1/320-410      AC V9F2N1
#=GS V9F2N1/320-410      OS Phytophthora parasitica P1569
#=GS V9F2N1/320-410      DE Uncharacterized protein
#=GS V9F2N1/320-410      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2IX81/320-410      AC W2IX81
#=GS W2IX81/320-410      OS Phytophthora parasitica
#=GS W2IX81/320-410      DE Uncharacterized protein
#=GS W2IX81/320-410      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2WW56/320-410      AC W2WW56
#=GS W2WW56/320-410      OS Phytophthora parasitica CJ01A1
#=GS W2WW56/320-410      DE Uncharacterized protein
#=GS W2WW56/320-410      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2N784/320-410      AC W2N784
#=GS W2N784/320-410      OS Phytophthora parasitica
#=GS W2N784/320-410      DE Uncharacterized protein
#=GS W2N784/320-410      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GF SQ 15
W4XXQ3/376-464              QTQEGVTVRWDIGLNRKTRATFNFPKKE-DLKLMHGDELRVRYTDPR-----EPWSGLAHVVKTPDNYSDEICVELKSGSNIPVKFTTNFAVDFV
H3G5R3/233-323              QTQEGVMVRWDTGLNKKRNAIFTCSRPDSDLRLVPGDEIRLRLGPTASMLYGKDWEGTGHVLRLDES---EVALEMRS-NNVPMEITDGYLVDFV
M4C1P1/321-411              QTQDGVIVRWDTGLNKKRNAIFTCSRPDSDLRLVPGDEIRLRLGPTASLLYGKDWEGTGHVLRLEES---EVALEMRS-HNVPLEIADGYLVDFI
A0A0P1A4W0/300-390          QTQEGVMVRWDTGLNKKRNAIFTCSRPDSDLRLVPGDEIRLRLGPSASMLYGKDWEGTGHVLRLEES---EVALEMRS-NNVPVEITDGYLVDFV
W2L3E7/320-410              QTQEGVMVRWDTGLNKKRNAIFTCSRPDSDLRLVPGDEIRLRLGPSASMLYGKDWEGTGHVLRLEES---EVALEMRS-NNVPIEIADGYLVDFV
A0A0W8CKT1/320-410          QTQEGVMVRWDTGLNKKRNAIFTCSRPDSDLRLVPGDEIRLRLGPSASMLYGKDWEGTGHVLRLEES---EVALEMRS-NNVPIEIADGYLVDFV
A0A329RJL4/320-410          QTQEGVMVRWDTGLNKKRNAIFTCSRPDSDLRLVPGDEIRLRLGPTASMLYGKDWEGTGHVLRLEES---EVALEMRS-NNVPIEITDGYLVDFV
A0A421GW28/391-481          QTQEGVMVRWDTGLNKKRNAIFTCSRPDTDLRLVPGDEIRLRLGPTASMLYGKDWEGTGHVLRIEES---EVALEMRS-NNVPVEITDGYLVDFV
A0A081A2X6/320-410          QTQEGVMVRWDTGLNKKRNAIFTCSRPDSDLRLVPGDEIRLRLGPSASMLYGKDWEGTGHVLRLEES---EVALEMRS-NNVPIEIADGYLVDFV
W2Z8E0/320-410              QTQEGVMVRWDTGLNKKRNAIFTCSRPDSDLRLVPGDEIRLRLGPSASMLYGKDWEGTGHVLRLEES---EVALEMRS-NNVPIEIADGYLVDFV
W2Q3V4/320-410              QTQEGVMVRWDTGLNKKRNAIFTCSRPDSDLRLVPGDEIRLRLGPSASMLYGKDWEGTGHVLRLEES---EVALEMRS-NNVPIEIADGYLVDFV
V9F2N1/320-410              QTQEGVMVRWDTGLNKKRNAIFTCSRPDSDLRLVPGDEIRLRLGPSASMLYGKDWEGTGHVLRLEES---EVALEMRS-NNVPIEIADGYLVDFV
W2IX81/320-410              QTQEGVMVRWDTGLNKKRNAIFTCSRPDSDLRLVPGDEIRLRLGPSASMLYGKDWEGTGHVLRLEES---EVALEMRS-NNVPIEIADGYLVDFV
W2WW56/320-410              QTQEGVMVRWDTGLNKKRNAIFTCSRPDSDLRLVPGDEIRLRLGPSASMLYGKDWEGTGHVLRLEES---EVALEMRS-NNVPIEIADGYLVDFV
W2N784/320-410              QTQEGVMVRWDTGLNKKRNAIFTCSRPDSDLRLVPGDEIRLRLGPSASMLYGKDWEGTGHVLRLEES---EVALEMRS-NNVPIEIADGYLVDFV
#=GC scorecons              99989959999599969559595556463996965999696955445333335495955996644650009656966905969655655759998
#=GC scorecons_70           ******_****_*****__*_*___*_*_****__***_*_*____________*_*__**_*__*____**__****__***______*_****
#=GC scorecons_80           ******_****_***_*__*_*_______**_*__***_*_*____________*_*__**_________*___*__*__*_*______*_****
#=GC scorecons_90           ******_****_***_*__*_*_______**_*__***_*_*____________*_*__**_________*___*__*__*_*________****
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