# STOCKHOLM 1.0
#=GF ID 2.40.30.190/FF/000001
#=GF DE Secreted protein ORF2
#=GF AC 2.40.30.190/FF/000001
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 29.089
#=GS 3hagA02/209-349     AC Q9IVZ8
#=GS 3hagA02/209-349     OS Hepatitis E virus Ct1
#=GS 3hagA02/209-349     DE Capsid protein
#=GS 3hagA02/209-349     DR CATH; 3hag; A:319-459; 
#=GS 3hagA02/209-349     DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS 3hagA02/209-349     DR GO; GO:0042802; 
#=GS Q68985/319-459      AC Q68985
#=GS Q68985/319-459      OS Hepatitis E virus human/g1/India/Hyderabad
#=GS Q68985/319-459      DE Secreted protein ORF2
#=GS Q68985/319-459      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS Q68985/319-459      DR GO; GO:0005515; GO:0042802; 
#=GS Q81871/319-459      AC Q81871
#=GS Q81871/319-459      OS Hepatitis E virus isolate Hetian
#=GS Q81871/319-459      DE Secreted protein ORF2
#=GS Q81871/319-459      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS Q81871/319-459      DR GO; GO:0005515; 
#=GS 2zzqA02/263-403     AC P29326
#=GS 2zzqA02/263-403     OS Hepatitis E virus (strain Burma)
#=GS 2zzqA02/263-403     DE Secreted protein ORF2
#=GS 2zzqA02/263-403     DR CATH; 2zzq; A:319-459; 
#=GS 2zzqA02/263-403     DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS 2ztnA02/191-331     AC Q1AHU7
#=GS 2ztnA02/191-331     OS Hepatitis E virus
#=GS 2ztnA02/191-331     DE Protein ORF2
#=GS 2ztnA02/191-331     DR CATH; 2ztn; A:319-459; 
#=GS 2ztnA02/191-331     DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS P33426/319-459      AC P33426
#=GS P33426/319-459      OS Hepatitis E virus (strain Pakistan)
#=GS P33426/319-459      DE Secreted protein ORF2
#=GS P33426/319-459      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS P33426/319-459      DR GO; GO:0042802; 
#=GS Q9IVZ8/331-471      AC Q9IVZ8
#=GS Q9IVZ8/331-471      OS Hepatitis E virus Ct1
#=GS Q9IVZ8/331-471      DE Capsid protein
#=GS Q9IVZ8/331-471      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS Q9IVZ8/331-471      DR GO; GO:0042802; 
#=GS A0A1U7AE29/1-135    AC A0A1U7AE29
#=GS A0A1U7AE29/1-135    OS Hepatitis E virus
#=GS A0A1U7AE29/1-135    DE Protein ORF2
#=GS A0A1U7AE29/1-135    DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS I6XHZ9/6-139        AC I6XHZ9
#=GS I6XHZ9/6-139        OS Hepatitis E virus
#=GS I6XHZ9/6-139        DE Protein ORF2
#=GS I6XHZ9/6-139        DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS Q00270/187-327      AC Q00270
#=GS Q00270/187-327      OS Hepatitis E virus (isolate rhesus)
#=GS Q00270/187-327      DE Capsid protein
#=GS Q00270/187-327      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS Q6J8F7/319-459      AC Q6J8F7
#=GS Q6J8F7/319-459      OS Hepatitis E virus swine/g3/United States/swUS1
#=GS Q6J8F7/319-459      DE Capsid protein
#=GS Q6J8F7/319-459      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS P29326/319-459      AC P29326
#=GS P29326/319-459      OS Hepatitis E virus (strain Burma)
#=GS P29326/319-459      DE Secreted protein ORF2
#=GS P29326/319-459      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS Q9YLQ9/319-459      AC Q9YLQ9
#=GS Q9YLQ9/319-459      OS Hepatitis E virus US2
#=GS Q9YLQ9/319-459      DE Capsid protein
#=GS Q9YLQ9/319-459      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS Q03500/319-458      AC Q03500
#=GS Q03500/319-458      OS Hepatitis E virus (strain Mexico)
#=GS Q03500/319-458      DE Capsid protein
#=GS Q03500/319-458      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS Q04611/319-459      AC Q04611
#=GS Q04611/319-459      OS Hepatitis E virus (strain Myanmar)
#=GS Q04611/319-459      DE Secreted protein ORF2
#=GS Q04611/319-459      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS Q1AHU7/319-459      AC Q1AHU7
#=GS Q1AHU7/319-459      OS Hepatitis E virus
#=GS Q1AHU7/319-459      DE Protein ORF2
#=GS Q1AHU7/319-459      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS Q1AHV0/319-459      AC Q1AHV0
#=GS Q1AHV0/319-459      OS Hepatitis E virus
#=GS Q1AHV0/319-459      DE Protein ORF2
#=GS Q1AHV0/319-459      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS Q9QP98/46-186       AC Q9QP98
#=GS Q9QP98/46-186       OS Hepatitis E virus
#=GS Q9QP98/46-186       DE Protein ORF2
#=GS Q9QP98/46-186       DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS A0A0S2EGM8/319-459  AC A0A0S2EGM8
#=GS A0A0S2EGM8/319-459  OS Hepatitis E virus
#=GS A0A0S2EGM8/319-459  DE Protein ORF2
#=GS A0A0S2EGM8/319-459  DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS Q9WNN2/145-285      AC Q9WNN2
#=GS Q9WNN2/145-285      OS Hepatitis E virus
#=GS Q9WNN2/145-285      DE Protein ORF2
#=GS Q9WNN2/145-285      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS K7S185/319-459      AC K7S185
#=GS K7S185/319-459      OS Hepatitis E virus
#=GS K7S185/319-459      DE Protein ORF2
#=GS K7S185/319-459      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GS E3TMQ0/220-360      AC E3TMQ0
#=GS E3TMQ0/220-360      OS Hepatitis E virus
#=GS E3TMQ0/220-360      DE Protein ORF2
#=GS E3TMQ0/220-360      DR ORG; Viruses; Hepeviridae; Orthohepevirus; Orthohepevirus A; 
#=GF SQ 22
3hagA02/209-349             RVSRYSSSARHKLRRGPDGTAELTTTAATRFMKDLHFTGTNDVGEVGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGIAIPHDIDLGESRVVIQDYDNQHEQDRPTPSPAPS
Q68985/319-459              RVSRYSSTARHRLRRGADGTAELTTTAATRFMKDLYFTSTNGVGEIGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGIAIPNDIDLGESRVVIQDYDNQHEQDRPTPSPAPS
Q81871/319-459              RVSRYSSTARHRLRRGADGTAELTTTAATRFMKDLYFTSTNGVGEIGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGIAIPHDIDLGESRVVIQDYDNQHEQDRPTPSPAPS
2zzqA02/263-403             RVSRYSSTARHRLRRGADGTAELTTTAATRFMKDLYFTSTNGVGEIGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGIAIPHDIDLGESRVVIQDYDNQHEQDRPTPSPAPS
2ztnA02/191-331             RVSRYTSTARHRLRRGADGTAELTTTAATRFMKDLHFTGTNGVGEVGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGITIPHDIDLGDSRVVIQDYDNQHEQDRPTPSPAPS
P33426/319-459              RVSRYSSTARHRLRRGADGTAELTTTAATRFMKDLYFTSTNGVGEIGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGIAIPHDIDLGESRVVIQDYDNQHEQDRPTPSPAPS
Q9IVZ8/331-471              RVSRYSSSARHKLRRGPDGTAELTTTAATRFMKDLHFTGTNGVGEVGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGELTVKLYTSVENAQQDKGVAIPHDIDLGESRVVIQDYDNQHEQDRPTPSPAPS
A0A1U7AE29/1-135            ------STAHHRLRRGADGTAELTTTAATRFMKDLYFSGTNGVGEIGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGIAIPHDIDLGESRVVIQDYDNQHEQDRLTPSPAPS
I6XHZ9/6-139                RVSRYTSTARHRLRRGADGTAELTTTAATRFMKDLHFAGTNGVGEVGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGIAIPHDIDLGDSRVVIQDYDNQHEQDRP-------
Q00270/187-327              RVSRYSSTARHRLRRGADGTAELTTTAATRFMKDLYFTSTNGVGEIGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSAHGEPTVKLYTSVENAQQDKGIAIPHDIDLGESRVVIQDYDNQHEQDRPTPSPAPS
Q6J8F7/319-459              RVSRYTSTARHRLRRGADGTAELTTTAATRFMKDLHFTGTNGVGEVGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGITIPHDIDLGDSRVVIQDYDNQHEQDRPTPSPAPS
P29326/319-459              RVSRYSSTARHRLRRGADGTAELTTTAATRFMKDLYFTSTNGVGEIGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGIAIPHDIDLGESRVVIQDYDNQHEQDRPTPSPAPS
Q9YLQ9/319-459              RVSRYTSTARHRLRRGADGTAELTTTAATRFMKDLHFAGTNGVGEVGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGITIPHDIDLGDSRVVIQDYDNQHEQDRPTPSPAPS
Q03500/319-458              RVSRYSSTARHS-ARGADGTAELTTTAATRFMKDLHFTGLNGVGEVGRGIALTLLNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGVAIPHDIDLGDSRVVIQDYDNQHEQDRPTPSPAPS
Q04611/319-459              RVSRYSSTARHRLRRGADGTAELTTTAATRFMKDLYFTSTNGVGEIGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSAHGEPTVKLYTSVENAQQDKGIAIPHDIDLGESRVVIQDYDNQHEQDRPTPSPAPS
Q1AHU7/319-459              RVSRYTSTARHRLRRGADGTAELTTTAATRFMKDLHFTGTNGVGEVGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGITIPHDIDLGDSRVVIQDYDNQHEQDRPTPSPAPS
Q1AHV0/319-459              RVSRYSSTARHRLRRGADGTAELTTTAATRFMKDLYFTSTNGVGEIGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGIAIPHDIDLGESRVVIQDYDNQHEQDRPTPSPAPS
Q9QP98/46-186               RVSRYSSTARHRLRRSADGTAELTTTAATRFMKDLYFTSTNGVGEIGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGIAIPHDIDLGESRVVIQDYDNQHEQDRPTPSPAPS
A0A0S2EGM8/319-459          RVSRYSSTARHRLKRGADGTAVLTTTAATRFMKDLHFTGTNGLGEVGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPSVKLYTSVENAQQDKGIAIPHDIDLGESRVVIQDYDNQHEQDRPTPSPAPS
Q9WNN2/145-285              RVSRYSSSARHKLRRGADGTAELTTTAATRFMKDLHFTGTNGVGEVGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGIAIPHDIDLGESRVVIQDYDNQHEQDRPTPSPAPS
K7S185/319-459              RVSRYTSTARHRLRRGADGTAELTTTAATRFMKDLHFTGMNGVGEIGRGIALTLFNIADTLLGGLPTELISSAGGQVFYSRPVVSANGEPTVKLYTSVENAQQDKGITIPHDIDLGDSRVVIQDYDNQHEQDRPTPSPAPS
E3TMQ0/220-360              RVSRYTSTARHRLRRGADGTAELTTTAATRFMKDLHFTGTNGVGEVGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSANGEPTVKLYTSVENAQQDKGIAIPHDIDLGDSRVVIQDYDNQHEQDRPTPSPAPS
#=GC scorecons              777775979897779879999899999999999997966798899799999999898999999999999999999989999999998998899999999999999987998999997999999999999999977777777
#=GC scorecons_70           *****_***************************************************************************************************************************************
#=GC scorecons_80           ______*****************************_*__******_**********************************************************************_*****************_______
#=GC scorecons_90           ______*_*_*___**_******************_*___*****_*************************************************************_********_****************________
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