# STOCKHOLM 1.0 #=GF ID 2.40.30.170/FF/000014 #=GF DE Efflux RND transporter periplasmic adaptor subunit #=GF AC 2.40.30.170/FF/000014 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 99.525 #=GS Q9HXW3/51-56_200-261 AC Q9HXW3 #=GS Q9HXW3/51-56_200-261 OS Pseudomonas aeruginosa PAO1 #=GS Q9HXW3/51-56_200-261 DE Probable Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein #=GS Q9HXW3/51-56_200-261 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS Q9HXW3/51-56_200-261 DR GO; GO:0046677; #=GS Q8EA93/78-83_215-277 AC Q8EA93 #=GS Q8EA93/78-83_215-277 OS Shewanella oneidensis MR-1 #=GS Q8EA93/78-83_215-277 DE HAE1 family effllux pump MFP component #=GS Q8EA93/78-83_215-277 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella oneidensis; #=GS Q7NHP0/103-108_281-341 AC Q7NHP0 #=GS Q7NHP0/103-108_281-341 OS Gloeobacter violaceus PCC 7421 #=GS Q7NHP0/103-108_281-341 DE HlyD family secretion protein #=GS Q7NHP0/103-108_281-341 DR ORG; Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacteraceae; Gloeobacter; Gloeobacter violaceus; #=GS Q8P8U1/64-67_197-255 AC Q8P8U1 #=GS Q8P8U1/64-67_197-255 OS Xanthomonas campestris pv. campestris str. ATCC 33913 #=GS Q8P8U1/64-67_197-255 DE Cation efflux system protein #=GS Q8P8U1/64-67_197-255 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; #=GS Q89EQ1/68-73_217-279 AC Q89EQ1 #=GS Q89EQ1/68-73_217-279 OS Bradyrhizobium diazoefficiens USDA 110 #=GS Q89EQ1/68-73_217-279 DE HlyD family secretion protein #=GS Q89EQ1/68-73_217-279 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; #=GS O66917/62-67_224-284 AC O66917 #=GS O66917/62-67_224-284 OS Aquifex aeolicus VF5 #=GS O66917/62-67_224-284 DE Acriflavin resistance protein AcrE #=GS O66917/62-67_224-284 DR ORG; Bacteria; Aquificae; Aquificae; Aquificales; Aquificaceae; Aquifex; Aquifex aeolicus; #=GS Q74G57/59-64_222-280 AC Q74G57 #=GS Q74G57/59-64_222-280 OS Geobacter sulfurreducens PCA #=GS Q74G57/59-64_222-280 DE Efflux pump, RND family, membrane fusion lipoprotein #=GS Q74G57/59-64_222-280 DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter; Geobacter sulfurreducens; #=GS Q89EQ2/53-56_200-262 AC Q89EQ2 #=GS Q89EQ2/53-56_200-262 OS Bradyrhizobium diazoefficiens USDA 110 #=GS Q89EQ2/53-56_200-262 DE Efflux protein #=GS Q89EQ2/53-56_200-262 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; #=GS A0A335EQF0/61-66_210-268 AC A0A335EQF0 #=GS A0A335EQF0/61-66_210-268 OS Acinetobacter baumannii #=GS A0A335EQF0/61-66_210-268 DE Cation/multidrug efflux system, mebrane-fusion component #=GS A0A335EQF0/61-66_210-268 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex; Acinetobacter baumannii; #=GS A0A443ZE68/64-67_197-256 AC A0A443ZE68 #=GS A0A443ZE68/64-67_197-256 OS Xanthomonas axonopodis pv. manihotis str. CIO151 #=GS A0A443ZE68/64-67_197-256 DE Efflux RND transporter periplasmic adaptor subunit #=GS A0A443ZE68/64-67_197-256 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas phaseoli; #=GS A0A1C3TNU7/71-74_204-264 AC A0A1C3TNU7 #=GS A0A1C3TNU7/71-74_204-264 OS Xanthomonas translucens pv. translucens DSM 18974 #=GS A0A1C3TNU7/71-74_204-264 DE RND superfamily multidrug resistance protein #=GS A0A1C3TNU7/71-74_204-264 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas translucens; #=GS A0A3Q9PYG2/70-73_203-262 AC A0A3Q9PYG2 #=GS A0A3Q9PYG2/70-73_203-262 OS Xanthomonas sp. ISO98C4 #=GS A0A3Q9PYG2/70-73_203-262 DE Hemolysin D #=GS A0A3Q9PYG2/70-73_203-262 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas sp. ISO98C4; #=GS Q8PKU8/64-67_197-256 AC Q8PKU8 #=GS Q8PKU8/64-67_197-256 OS Xanthomonas citri pv. citri str. 306 #=GS Q8PKU8/64-67_197-256 DE Cation efflux system protein #=GS Q8PKU8/64-67_197-256 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas citri group; Xanthomonas citri; #=GS A0A1S1BUX0/45-50_194-252 AC A0A1S1BUX0 #=GS A0A1S1BUX0/45-50_194-252 OS Pseudomonas sp. HMSC059F05 #=GS A0A1S1BUX0/45-50_194-252 DE Efflux transporter periplasmic adaptor subunit #=GS A0A1S1BUX0/45-50_194-252 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC059F05; #=GS A0A448BW21/45-50_194-252 AC A0A448BW21 #=GS A0A448BW21/45-50_194-252 OS Pseudomonas fluorescens #=GS A0A448BW21/45-50_194-252 DE Putative RND efflux membrane fusion protein #=GS A0A448BW21/45-50_194-252 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas fluorescens; #=GS A0A1F0IBK3/51-56_200-261 AC A0A1F0IBK3 #=GS A0A1F0IBK3/51-56_200-261 OS Pseudomonas sp. HMSC065H01 #=GS A0A1F0IBK3/51-56_200-261 DE Efflux transporter periplasmic adaptor subunit #=GS A0A1F0IBK3/51-56_200-261 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC065H01; #=GS A0A2V2TNH0/51-56_200-261 AC A0A2V2TNH0 #=GS A0A2V2TNH0/51-56_200-261 OS Pseudomonas sp. RW410 #=GS A0A2V2TNH0/51-56_200-261 DE Efflux RND transporter periplasmic adaptor subunit #=GS A0A2V2TNH0/51-56_200-261 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. RW410; #=GS A0A0A3Y266/47-50_194-256 AC A0A0A3Y266 #=GS A0A0A3Y266/47-50_194-256 OS Bradyrhizobium japonicum #=GS A0A0A3Y266/47-50_194-256 DE Hemolysin secretion protein D #=GS A0A0A3Y266/47-50_194-256 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium japonicum; #=GS A0A0H2X6U7/64-67_197-255 AC A0A0H2X6U7 #=GS A0A0H2X6U7/64-67_197-255 OS Xanthomonas campestris pv. campestris str. 8004 #=GS A0A0H2X6U7/64-67_197-255 DE Cation efflux system protein #=GS A0A0H2X6U7/64-67_197-255 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; #=GS A0A0A6TKZ1/70-73_203-262 AC A0A0A6TKZ1 #=GS A0A0A6TKZ1/70-73_203-262 OS Xanthomonas phaseoli pv. phaseoli #=GS A0A0A6TKZ1/70-73_203-262 DE Hemolysin D #=GS A0A0A6TKZ1/70-73_203-262 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas phaseoli; #=GS H8FB81/64-67_197-256 AC H8FB81 #=GS H8FB81/64-67_197-256 OS Xanthomonas citri pv. mangiferaeindicae LMG 941 #=GS H8FB81/64-67_197-256 DE Efflux transporter, RND family, MFP subunit #=GS H8FB81/64-67_197-256 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas citri group; Xanthomonas citri; #=GS A0A2K2RBA7/64-67_197-256 AC A0A2K2RBA7 #=GS A0A2K2RBA7/64-67_197-256 OS Xanthomonas citri #=GS A0A2K2RBA7/64-67_197-256 DE Efflux RND transporter periplasmic adaptor subunit #=GS A0A2K2RBA7/64-67_197-256 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas citri group; Xanthomonas citri; #=GS A0A2A6MPQ8/68-73_217-279 AC A0A2A6MPQ8 #=GS A0A2A6MPQ8/68-73_217-279 OS Bradyrhizobium diazoefficiens #=GS A0A2A6MPQ8/68-73_217-279 DE Efflux RND transporter periplasmic adaptor subunit #=GS A0A2A6MPQ8/68-73_217-279 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; #=GS A0A0E3VV20/68-73_217-279 AC A0A0E3VV20 #=GS A0A0E3VV20/68-73_217-279 OS Bradyrhizobium diazoefficiens #=GS A0A0E3VV20/68-73_217-279 DE HlyD family secretion protein #=GS A0A0E3VV20/68-73_217-279 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; #=GS Q9I6X6/61-66_210-268 AC Q9I6X6 #=GS Q9I6X6/61-66_210-268 OS Pseudomonas aeruginosa PAO1 #=GS Q9I6X6/61-66_210-268 DE Probable Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein #=GS Q9I6X6/61-66_210-268 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS A0A072ZSL2/61-66_210-268 AC A0A072ZSL2 #=GS A0A072ZSL2/61-66_210-268 OS Pseudomonas aeruginosa #=GS A0A072ZSL2/61-66_210-268 DE Efflux RND transporter periplasmic adaptor subunit #=GS A0A072ZSL2/61-66_210-268 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS A0A335ZA70/45-50_194-252 AC A0A335ZA70 #=GS A0A335ZA70/45-50_194-252 OS Acinetobacter baumannii #=GS A0A335ZA70/45-50_194-252 DE Cation/multidrug efflux system, mebrane-fusion component #=GS A0A335ZA70/45-50_194-252 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex; Acinetobacter baumannii; #=GS A0A069Q6H1/51-56_200-261 AC A0A069Q6H1 #=GS A0A069Q6H1/51-56_200-261 OS Pseudomonas aeruginosa #=GS A0A069Q6H1/51-56_200-261 DE Multidrug efflux RND transporter periplasmic adaptor subunit MexJ #=GS A0A069Q6H1/51-56_200-261 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS V6ABG2/51-56_200-261 AC V6ABG2 #=GS V6ABG2/51-56_200-261 OS Pseudomonas aeruginosa MH27 #=GS V6ABG2/51-56_200-261 DE Putative Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein #=GS V6ABG2/51-56_200-261 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS A0A0F6UBE4/51-56_200-261 AC A0A0F6UBE4 #=GS A0A0F6UBE4/51-56_200-261 OS Pseudomonas aeruginosa #=GS A0A0F6UBE4/51-56_200-261 DE Efflux RND transporter periplasmic adaptor subunit #=GS A0A0F6UBE4/51-56_200-261 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS A0A335ESX8/51-56_200-261 AC A0A335ESX8 #=GS A0A335ESX8/51-56_200-261 OS Acinetobacter baumannii #=GS A0A335ESX8/51-56_200-261 DE RND family drug transporter #=GS A0A335ESX8/51-56_200-261 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex; Acinetobacter baumannii; #=GS A0A448BGI8/51-56_200-261 AC A0A448BGI8 #=GS A0A448BGI8/51-56_200-261 OS Pseudomonas fluorescens #=GS A0A448BGI8/51-56_200-261 DE Efflux transmembrane protein #=GS A0A448BGI8/51-56_200-261 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas fluorescens; #=GS A0A2A6MNU5/53-56_200-262 AC A0A2A6MNU5 #=GS A0A2A6MNU5/53-56_200-262 OS Bradyrhizobium diazoefficiens #=GS A0A2A6MNU5/53-56_200-262 DE Efflux RND transporter periplasmic adaptor subunit #=GS A0A2A6MNU5/53-56_200-262 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; #=GS A0A0E4BQT1/46-49_193-255 AC A0A0E4BQT1 #=GS A0A0E4BQT1/46-49_193-255 OS Bradyrhizobium diazoefficiens #=GS A0A0E4BQT1/46-49_193-255 DE Efflux protein #=GS A0A0E4BQT1/46-49_193-255 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; #=GF SQ 34 Q9HXW3/51-56_200-261 GEIRARDGEREVLIGLPEHSFERFRIGQPVSVELWSQRDRRFAGHIRELSPAADPQSRTFAARVAFDD- Q8EA93/78-83_215-277 GKINAILNPVEVRYAISQHDFGKAQKGQGVNVTVEAYANKVFKGTVNYVAPAVDESSGRVEVHAALDNS Q7NHP0/103-108_281-341 GSISAWDNRLELRAQVPEMDLPKVTAGQSVLVTSDADRQIVVTGRVRQITPQIDERTRLGVVRIDVP-- Q8P8U1/64-67_197-255 --LEPRDSQLEATLNVPERELATLKSGQPVTLLADALPGQQFVGKVDRIAPVVDSGSGTFRVVCA---- Q89EQ1/68-73_217-279 GEVQARDGDRDVVFDVYESIFLGAADRSSVSLVLISDATVTAGGQVREVSPAVDARSATIRVKVAIKDP O66917/62-67_224-284 GTIVAGTRPYKVEVSFPEKYFGEINIGDTLEVYVEK-LGRVFPAKVVEVEPAVDPVSRTFKVKALIDD- Q74G57/59-64_222-280 GTVRAADGGRRLEASVPESLAGRVRLGQRVPVTIDG-AGLSLEGRVVEIVPAADPASRTFTVKVDL--- Q89EQ2/53-56_200-262 --IEPRPDIREAVVDIGPDYPLPLEVGLPFTVSLQLLPAVQVEGTVREIAPQADPATRLRRVRIALSNP A0A335EQF0/61-66_210-268 GDIQARDGERDAVFNVYESLFSHDVDGQRITVSLLGKPEVTASGKVREITPTVDERSGTLKVKVG---- A0A443ZE68/64-67_197-256 --LEPRDSQLEATLNVPERELATLKSGQPVTLLADALPGQQFVGKVDRIAPVVDSGSGTFRVVCAF--- A0A1C3TNU7/71-74_204-264 --LEARDSRLEATLNVPERELATLKAGQPVTLLADALPGKQYLGKVDRIAPVVDSGSGTFRVVCAFE-- A0A3Q9PYG2/70-73_203-262 --LEPRDSQLEATLNVPERELATLKSGQPVTLLADALPGQQFVGKVDRIAPVVDSGSGTFRVVCAF--- Q8PKU8/64-67_197-256 --LEPRDSQLEATLNVPERELATLKSGQPVTLLADALPGQQFVGKVDRIAPVVDSGSGTFRVVCAF--- A0A1S1BUX0/45-50_194-252 GDIQARDGERDAVFNVYESLFSHDVDGQRITVSLLGKPEVTASGKVREITPTVDERSGTLKVKVG---- A0A448BW21/45-50_194-252 GDIQARDGERDAVFNVYESLFSHDVDGQRITVSLLGKPEVTASGKVREITPTVDERSGTLKVKVG---- A0A1F0IBK3/51-56_200-261 GEIRARDGEREVLIGLPEHSFERFRIGQPVSVELWSQRDRRFAGHIRELSPAADPQSRTFAARVAFDD- A0A2V2TNH0/51-56_200-261 GEIRARDGEREVLIGLPEHSFERFRIGQPVSVELWSQRDRRFAGHIRELSPAADPQSRTFAARVAFDD- A0A0A3Y266/47-50_194-256 --IEPRPDIREAVVDIGEDFPLPLEVGLPFTVGLQLLPAVQVEGRVREIAPQADPLTRLRRVRIALSNP A0A0H2X6U7/64-67_197-255 --LEPRDSQLEATLNVPERELATLKSGQPVTLLADALPGQQFVGKVDRIAPVVDSGSGTFRVVCA---- A0A0A6TKZ1/70-73_203-262 --LEPRDSQLEATLNVPERELATLKSGQPVTLLADALPGQQFVGKVDRIAPVVDSGSGTFRVVCAF--- H8FB81/64-67_197-256 --LEPRDSQLEATLNVPERELATLKSGQPVTLLADALPGQQFVGKVDRIAPVVDSGSGTFRVVCAF--- A0A2K2RBA7/64-67_197-256 --LEPRDSQLEATLNVPERELATLKSGQPVTLLADALPGQQFVGKVDRIAPVVDSGSGTFRVVCAF--- A0A2A6MPQ8/68-73_217-279 GEVQARDGDRDVVFDVYESIFLGAADRSSVSLVLISDATVTAGGQVREVSPAVDARSATIRVKVAIKDP A0A0E3VV20/68-73_217-279 GEVQARDGDRDVVFDVYESIFLGAADGSSVSLVLISDATVTAGGQVREVSPAVDARSATIRVKVAINDP Q9I6X6/61-66_210-268 GDIQARDGERDAVFNVYESLFSHDVDGQRITVSLLGKPEVTASGKVREITPTVDERSGTLKVKVG---- A0A072ZSL2/61-66_210-268 GDIQARDGERDAVFNVYESLFSHDVDGQRITVSLLGKPEVTASGKVREITPTVDERSGTLKVKVG---- A0A335ZA70/45-50_194-252 GDIQARDGERDAVFNVYESLFSHDVDGQRITVSLLGKPEVTASGKVREITPTVDERSGTLKVKVG---- A0A069Q6H1/51-56_200-261 GEIRARDGEREVLIGLPEHSFERFRIGQPVSVELWSQRDRRFAGHIRELSPAADPQSRTFAARVAFDD- V6ABG2/51-56_200-261 GEIRARDGEREVLIGLPEHSFERFRIGQPVSVELWSQRDRRFAGHIRELSPAADPQSRTFAARVAFDD- A0A0F6UBE4/51-56_200-261 GEIRARDGEREVLIGLPEHSFERFRIGQPVSVELWSQRDRRFAGHIRELSPAADPQSRTFAARVAFDD- A0A335ESX8/51-56_200-261 GEIRARDGEREVLIGLPEHSFERFRIGQPVSVELWSQRDRRFAGHIRELSPAADPQSRTFAARVAFDD- A0A448BGI8/51-56_200-261 GEIRARDGEREVLIGLPEHSFERFRIGQPVSVELWSQRDRRFAGHIRELSPAADPQSRTFAARVAFDD- A0A2A6MNU5/53-56_200-262 --IEPRPDIREAVVDIGPDYPLPLEVGLPFTVSLQLLPAVQVEGTVREIAPQADPATRLRRVRIALSNP A0A0E4BQT1/46-49_193-255 --IEPRPDIREAVVDIGPDYPLPLEVGLPFMVSLQLLPAVQVEGTVREIAPQADPATRLRRVRIALSNP #=GC scorecons 326467654565444647435333338556563524354344385755659469447564474563110 #=GC scorecons_70 __*_***___*______*________*__*_*___________*_*__*_*__*__*_*__*__*____ #=GC scorecons_80 _____*___________*________*________________*_*____*__*__*____________ #=GC scorecons_90 __________________________*________________*______*__*_______________ //