# STOCKHOLM 1.0
#=GF ID 2.40.270.10/FF/000015
#=GF DE DNA-directed RNA polymerase subunit beta
#=GF AC 2.40.270.10/FF/000015
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 25.582
#=GS Q387I8/1091-1119_1136-1189_1327-1467      AC Q387I8
#=GS Q387I8/1091-1119_1136-1189_1327-1467      OS Trypanosoma brucei brucei TREU927
#=GS Q387I8/1091-1119_1136-1189_1327-1467      DE DNA-directed RNA polymerase subunit beta
#=GS Q387I8/1091-1119_1136-1189_1327-1467      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q387I8/1091-1119_1136-1189_1327-1467      DR GO; GO:0003899; GO:0005634; GO:0005654; GO:0005730; GO:0006351; 
#=GS Q4QA33/1109-1137_1154-1207_1345-1485      AC Q4QA33
#=GS Q4QA33/1109-1137_1154-1207_1345-1485      OS Leishmania major
#=GS Q4QA33/1109-1137_1154-1207_1345-1485      DE DNA-directed RNA polymerase subunit beta
#=GS Q4QA33/1109-1137_1154-1207_1345-1485      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4QA33/1109-1137_1154-1207_1345-1485      DR GO; GO:0005654; GO:0005730; 
#=GS A0A0N0VEW4/1110-1137_1154-1207_1345-1485  AC A0A0N0VEW4
#=GS A0A0N0VEW4/1110-1137_1154-1207_1345-1485  OS Leptomonas pyrrhocoris
#=GS A0A0N0VEW4/1110-1137_1154-1207_1345-1485  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0N0VEW4/1110-1137_1154-1207_1345-1485  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leptomonas; Leptomonas pyrrhocoris; 
#=GS A4HEF6/1060-1088_1105-1158_1296-1436      AC A4HEF6
#=GS A4HEF6/1060-1088_1105-1158_1296-1436      OS Leishmania braziliensis
#=GS A4HEF6/1060-1088_1105-1158_1296-1436      DE DNA-directed RNA polymerase subunit beta
#=GS A4HEF6/1060-1088_1105-1158_1296-1436      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GS A0A0N0P6L8/1108-1135_1152-1205_1343-1483  AC A0A0N0P6L8
#=GS A0A0N0P6L8/1108-1135_1152-1205_1343-1483  OS Leptomonas seymouri
#=GS A0A0N0P6L8/1108-1135_1152-1205_1343-1483  DE DNA-directed RNA polymerase subunit beta
#=GS A0A0N0P6L8/1108-1135_1152-1205_1343-1483  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leptomonas; Leptomonas seymouri; 
#=GS A4I1A3/1109-1137_1154-1207_1345-1485      AC A4I1A3
#=GS A4I1A3/1109-1137_1154-1207_1345-1485      OS Leishmania infantum
#=GS A4I1A3/1109-1137_1154-1207_1345-1485      DE DNA-directed RNA polymerase subunit beta
#=GS A4I1A3/1109-1137_1154-1207_1345-1485      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS E9AXD9/1108-1136_1153-1206_1344-1484      AC E9AXD9
#=GS E9AXD9/1108-1136_1153-1206_1344-1484      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9AXD9/1108-1136_1153-1206_1344-1484      DE DNA-directed RNA polymerase subunit beta
#=GS E9AXD9/1108-1136_1153-1206_1344-1484      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS A0A088RS14/1108-1136_1153-1206_1344-1484  AC A0A088RS14
#=GS A0A088RS14/1108-1136_1153-1206_1344-1484  OS Leishmania panamensis
#=GS A0A088RS14/1108-1136_1153-1206_1344-1484  DE DNA-directed RNA polymerase subunit beta
#=GS A0A088RS14/1108-1136_1153-1206_1344-1484  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania panamensis; 
#=GS E9BHG7/1109-1137_1154-1207_1345-1485      AC E9BHG7
#=GS E9BHG7/1109-1137_1154-1207_1345-1485      OS Leishmania donovani BPK282A1
#=GS E9BHG7/1109-1137_1154-1207_1345-1485      DE DNA-directed RNA polymerase subunit beta
#=GS E9BHG7/1109-1137_1154-1207_1345-1485      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS A0A1E1IXV1/1108-1136_1153-1206_1344-1484  AC A0A1E1IXV1
#=GS A0A1E1IXV1/1108-1136_1153-1206_1344-1484  OS Leishmania guyanensis
#=GS A0A1E1IXV1/1108-1136_1153-1206_1344-1484  DE DNA-directed RNA polymerase subunit beta
#=GS A0A1E1IXV1/1108-1136_1153-1206_1344-1484  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania guyanensis; 
#=GS Q8T307/1091-1119_1136-1189_1327-1467      AC Q8T307
#=GS Q8T307/1091-1119_1136-1189_1327-1467      OS Trypanosoma brucei brucei
#=GS Q8T307/1091-1119_1136-1189_1327-1467      DE DNA-directed RNA polymerase subunit beta
#=GS Q8T307/1091-1119_1136-1189_1327-1467      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q8T307/1091-1119_1136-1189_1327-1467      DR GO; GO:0003899; GO:0005634; GO:0005654; GO:0005730; GO:0006351; 
#=GF SQ 11
Q387I8/1091-1119_1136-1189_1327-1467              STIPFFEHNCSPRNLFQCGLSKQTAGTQLPQRYISRTLPMDYFGLDDVSLGVNAVVAILAYTGYDLDDAMILNSTAKQFGMLNPVIGDKFSSRHGQKGTLPLDIRSHDLPFSTRDGITPDIIINPHAFPSRMTVGMVLEMMGAKLGCIQGRLCDHSAWSVIDEQPRSAKTIGDALEALGYNRYGREKLIDGITGEEIEAEVLVGISGYQRLRHMVSDKWQARAR
Q4QA33/1109-1137_1154-1207_1345-1485              ATIPFFEHNCSPRNLFQCGLSKQSSGTQLPQRYISRTLPMDYYGLDDVNLGVNAVIAILAYTGYDMDDAVIINSTAAQRGMLTPTVGDKFSSRHGQKGTLPLHIRSHDLPFATASGITPDVIINPHAFPSRMTVGMVLEIMTAKVGAIEGRFIDNSAWSTVDEQPRVAELIGEALVKAGYNRYGREHLIDGISGEEMKADVFMGICGYQRLRHMVSDKWQARAR
A0A0N0VEW4/1110-1137_1154-1207_1345-1485          -TIPFFEYNCSPRNLFQCGLSKQSSGTQLPQRYISRTLPMDYYNLDDVNLGVNAVIAILAYTGYDMDDAVVINSTAAQRGMLTPTVGDKFSSRHGQKGTLPLHVRSHDLPFATASGITPDVIINPHAFPSRMTVGMVLEIMTAKVGAVEGRFMDNSAWATVDEQPRVAEVIGDALSKAGYNRYGREHLIDGISGEEMEADVFMGICGYQRLRHMVNDKWQARAR
A4HEF6/1060-1088_1105-1158_1296-1436              ATIPFFEHNCSPRNLFQCGLSKQSSGTQLPQRYISRTLPMDYYGLDDVNLGVNAVIAILAYTGYDMDDAVIINTTTTQRGMLTPTVGDKFSSRHGQKGTLPLHISSHDLPFSTTSGITPDVIINPHAFPSRMTVGMMLEIMTAKVGAIEGRFIDNSAWSTVDDQPRVAELIGDALVKAGYNRYGREHLIDGISGEEMKADVFMGICGYQRLRHMVSDKWQARAR
A0A0N0P6L8/1108-1135_1152-1205_1343-1483          -TIPFFEYNCSPRNLFQCGLSKQSSGTQLPQRYISRTLPMDYYGLDDVNLGVNAVIAILAYTGYDMDDAVIINSTAAQRGMLTPTVGDKFSSRHGQKGTLPMHIRSHDLPFATASGITPDVIINPHAFPSRMTVGMVLEIMTAKVGAVEGRFVDNSAWATVDEQPRVAEVIGDALSKAGYNRYGREHLIDGISGEEMEADVFMGICGYQRLRHMVNDKWQARAR
A4I1A3/1109-1137_1154-1207_1345-1485              ATIPFFEHNCSPRNLFQCGLSKQSSGTQLPQRYISRTLPMDYYGLDDVNLGVNAVIAILAYTGYDMDDAVIINSTAAQRGMLTPTVGDKFSSRHGQKGTLPLHIRSHNLPFATASGITPDVIINPHAFPSRMTVGMVLEIMTAKVGAIEGRFIDHSAWSTVDEQPRVAELIGEALVKAGYNRYGREHLIDGISGEEMKADVFMGICGYQRLRHMVSDKWQARAR
E9AXD9/1108-1136_1153-1206_1344-1484              ATIPFFEHNCSPRNLFQCGLSKQSSGTQLPQRYISRTLPMDYYGLDDVNLGVNAVIAVLAYTGYDMDDAVIINSTAAQRGMLTPTVGDKFSSRHGQKGTLPLHIRSHDLPFATASGITPDVIINPHAFPSRMTVGMVLEIMTAKVGAIEGRFIDHSAWSTVDEQPRVAELIGEALVKAGYNRYGREHLIDGISGEEMKADVFMGICGYQRLRHMVSDKWQARAR
A0A088RS14/1108-1136_1153-1206_1344-1484          ATIPFFEHNCSPRNLFQCGLSKQSSGTQLPQRYISRTLPMDYYGLDDVNLGVNAVIAILAYTGYDMDDAVIINTTTTQRGMLTPAVGDKFSSRHGQKGTLPLHISSHDLPFSTTSGITPDVIINPHAFPSRMTVGMMLEIMTAKVGAIEGRFIDNSAWSTVDDQPRVAELIGDALVKAGYNRYGREHLIDGISGEEMKADVFMGICGYQRLRHMVSDKWQARAR
E9BHG7/1109-1137_1154-1207_1345-1485              ATIPFFEHNCSPRNLFQCGLSKQSSGTQLPQRYISRTLPMDYYGLDDVNLGVNAVIAILAYTGYDMDDAVIINSTAAQRGMLTPTVGDKFSSRHGQKGTLPLHIRSHNLPFATASGITPDVIINPHAFPSRMTVGMVLEIMTAKVGAIEGRFIDHSAWSTVDEQPRVAELIGEALVKAGYNRYGREHLIDGISGEEMKADVFMGICGYQRLRHMVSDKWQARAR
A0A1E1IXV1/1108-1136_1153-1206_1344-1484          ATIPFFEHNCSPRNLFQCGLSKQSSGTQLPQRYISRTLPMDYYGLDDVNLGVNAVIAILAYTGYDMDDAVIINTTTTQRGMLTPTVGDKFSSRHGQKGTLPLHISSHDLPFSTTSGITPDVIINPHAFPSRMTVGMMLEIMTAKVGAIEGRFIDNSAWSTVDDQPRVAELIGDALVKAGYNRYGREHLIDGISGEEMKADVFMGICGYQRLRHMVSDKWQARAR
Q8T307/1091-1119_1136-1189_1327-1467              STIPFFEHNCSPRNLFQCGLSKQTAGTQLPQRYISRTLPMDYFGLDDVSLGVNAVVAILAYTGYDLDDAMILNSTAKQFGMLNPVIGDKFSSRHGQKGTLPLDIRSHDLPFSTRDGITPDIIINPHAFPSRMTVGMVLEMMGAKLGCIQGRLCDHSAWSVIDEQPRSAKTIGDALEALGYNRYGREKLIDGITGEEIEAEVLVGISGYQRLRHMVSDKWQARAR
#=GC scorecons                                    39999997999999999999999669999999999999999977999969999997989999999699968696974949996957999999999999999858699799969459999979999999999999997996959969576996495999757979995964997994559999999969999969996597966996999999999799999999
#=GC scorecons_70                                 _**********************__***********************_***************************_*_***_*_*****************_********_*__**************************_****_*****_*_****_******_*__*****___********_*****_****_*******_******************
#=GC scorecons_80                                 _**********************__***********************_******_*********_***_*_*_*__*_***_*__****************_*_******_*__*****_***************_**_*_**_*_*_**__*_****__*****_*__*****___********_*****_***__*_*__**_******************
#=GC scorecons_90                                 _******_***************__*****************__****_******_*********_***_*_*_*__*_***_*__****************_*_**_***_*__*****_***************_**_*_**_*___**__*_***___*_***_*__**_**___********_*****_***__*_*__**_*********_********
//