# STOCKHOLM 1.0
#=GF ID 2.40.10.250/FF/000002
#=GF DE Replicase polyprotein 1a
#=GF AC 2.40.10.250/FF/000002
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 10.456
#=GS P0C6X8/4154-4265      AC P0C6X8
#=GS P0C6X8/4154-4265      OS Murine hepatitis virus strain 2
#=GS P0C6X8/4154-4265      DE Replicase polyprotein 1ab
#=GS P0C6X8/4154-4265      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6X8/4154-4265      DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS P0C6V1/4212-4323      AC P0C6V1
#=GS P0C6V1/4212-4323      OS Murine hepatitis virus strain JHM
#=GS P0C6V1/4212-4323      DE Replicase polyprotein 1a
#=GS P0C6V1/4212-4323      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6V1/4212-4323      DR GO; GO:0004197; GO:0097264; 
#=GS P0C6V1/4212-4323      DR EC; 3.4.19.12; 3.4.22.69; 
#=GS P0C6V0/4206-4317      AC P0C6V0
#=GS P0C6V0/4206-4317      OS Murine hepatitis virus strain A59
#=GS P0C6V0/4206-4317      DE Replicase polyprotein 1a
#=GS P0C6V0/4206-4317      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6V0/4206-4317      DR GO; GO:0097264; 
#=GS P0C6V0/4206-4317      DR EC; 3.4.19.12; 3.4.22.69; 
#=GS A0A096XNH7/4069-4181  AC A0A096XNH7
#=GS A0A096XNH7/4069-4181  OS Longquan Rl rat coronavirus
#=GS A0A096XNH7/4069-4181  DE Orf1ab polyprotein
#=GS A0A096XNH7/4069-4181  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Longquan Rl rat coronavirus; 
#=GS P0C6Y0/4212-4323      AC P0C6Y0
#=GS P0C6Y0/4212-4323      OS Murine hepatitis virus strain JHM
#=GS P0C6Y0/4212-4323      DE Replicase polyprotein 1ab
#=GS P0C6Y0/4212-4323      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6Y0/4212-4323      DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS P0C6X9/4206-4317      AC P0C6X9
#=GS P0C6X9/4206-4317      OS Murine hepatitis virus strain A59
#=GS P0C6X9/4206-4317      DE Replicase polyprotein 1ab
#=GS P0C6X9/4206-4317      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6X9/4206-4317      DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS P0C6U9/4154-4265      AC P0C6U9
#=GS P0C6U9/4154-4265      OS Murine hepatitis virus strain 2
#=GS P0C6U9/4154-4265      DE Replicase polyprotein 1a
#=GS P0C6U9/4154-4265      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS P0C6U9/4154-4265      DR EC; 3.4.19.12; 3.4.22.69; 
#=GS I7AWB5/4211-4322      AC I7AWB5
#=GS I7AWB5/4211-4322      OS Murine coronavirus
#=GS I7AWB5/4211-4322      DE Polyprotein ORF1ab
#=GS I7AWB5/4211-4322      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS C6GHR8/4202-4313      AC C6GHR8
#=GS C6GHR8/4202-4313      OS Rat coronavirus Parker
#=GS C6GHR8/4202-4313      DE Orf1ab polyprotein
#=GS C6GHR8/4202-4313      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS C6GHR9/4202-4313      AC C6GHR9
#=GS C6GHR9/4202-4313      OS Rat coronavirus Parker
#=GS C6GHR9/4202-4313      DE Orf1a polyprotein
#=GS C6GHR9/4202-4313      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS Q9J3E9/4205-4316      AC Q9J3E9
#=GS Q9J3E9/4205-4316      OS Murine hepatitis virus
#=GS Q9J3E9/4205-4316      DE RNA-directed RNA polymerase
#=GS Q9J3E9/4205-4316      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS C0KYS8/4208-4319      AC C0KYS8
#=GS C0KYS8/4208-4319      OS Murine coronavirus RA59/SJHM
#=GS C0KYS8/4208-4319      DE ORF1a polyprotein
#=GS C0KYS8/4208-4319      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS C0KYT7/4208-4319      AC C0KYT7
#=GS C0KYT7/4208-4319      OS Murine coronavirus repA59/RJHM
#=GS C0KYT7/4208-4319      DE ORF1a polyprotein
#=GS C0KYT7/4208-4319      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS C0KYQ8/4208-4319      AC C0KYQ8
#=GS C0KYQ8/4208-4319      OS Murine coronavirus RA59/R13
#=GS C0KYQ8/4208-4319      DE ORF1a polyprotein
#=GS C0KYQ8/4208-4319      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GS I7B5F2/4211-4322      AC I7B5F2
#=GS I7B5F2/4211-4322      OS Murine coronavirus
#=GS I7B5F2/4211-4322      DE Polyprotein ORF1a
#=GS I7B5F2/4211-4322      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; 
#=GF SQ 15
P0C6X8/4154-4265              -LQNNELMPQKLRTQVVNSGSDMNCNTPTQCYYNTTGMGKIVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
P0C6V1/4212-4323              -LQNNELMPQKLRTQVVNSGSDMNCNIPTQCYYNTTGTGKIVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
P0C6V0/4206-4317              -LQNNELMPQKLRTQVVNSGSDMNCNTPTQCYYNTTGTGKIVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
A0A096XNH7/4069-4181          VLQNNELMPQKLKIQVVNSGSDTNCNVPTQCYYNNSGTGRIVYAILSDVDGLKYTKIVKDDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
P0C6Y0/4212-4323              -LQNNELMPQKLRTQVVNSGSDMNCNIPTQCYYNTTGTGKIVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
P0C6X9/4206-4317              -LQNNELMPQKLRTQVVNSGSDMNCNTPTQCYYNTTGTGKIVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
P0C6U9/4154-4265              -LQNNELMPQKLRTQVVNSGSDMNCNTPTQCYYNTTGMGKIVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
I7AWB5/4211-4322              -LQNNELMPQKLRTQVVNSGSDMNCNTPTQCYYNTTGTGKIVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
C6GHR8/4202-4313              -LQNNELMPQKLRTQVVNSGSDMNCNTPTQCYYNTTGTGKIVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
C6GHR9/4202-4313              -LQNNELMPQKLRTQVVNSGSDMNCNTPTQCYYNTTGTGKIVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
Q9J3E9/4205-4316              -LQNNELMPQKLRTQVVNSGSDMNCNTPTQCYYNTTGTGKIVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
C0KYS8/4208-4319              -LQNNELMPQKLRTQVVNSGSDMNCNTPTQCYYNTTGTGKIVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
C0KYT7/4208-4319              -LQNNELMPQKLRTQVVNSGSDMNCNTPTQCYYNTTGTGKIVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
C0KYQ8/4208-4319              -LQNNELMPQKLRTQVVNSGSDMNCNTPTQCYYNTTGTGKIVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
I7B5F2/4211-4322              -LQNNELMPQKLRTQVVNSGSDMNCNTPTQCYYNTTGTGKIVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
#=GC scorecons                09999999999965999999995999599999995597969999999949999999999699999999999999999999999999999999999999999999999999999
#=GC scorecons_70             _************_********_***_*******__************_****************************************************************
#=GC scorecons_80             _***********__********_***_*******__***_********_**********_*****************************************************
#=GC scorecons_90             _***********__********_***_*******__*_*_********_**********_*****************************************************
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