# STOCKHOLM 1.0
#=GF ID 2.40.10.120/FF/000016
#=GF DE Genome polyprotein
#=GF AC 2.40.10.120/FF/000016
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 32.752
#=GS Q01299/1474-1673      AC Q01299
#=GS Q01299/1474-1673      OS Tick-borne encephalitis virus (strain HYPR)
#=GS Q01299/1474-1673      DE Genome polyprotein
#=GS Q01299/1474-1673      DR ORG; Viruses; Flaviviridae; Flavivirus; Tick-borne encephalitis virus; 
#=GS Q01299/1474-1673      DR GO; GO:0039502; GO:0039563; 
#=GS Q01299/1474-1673      DR EC; 2.1.1.56; 2.1.1.57; 2.7.7.48; 3.4.21.91; 3.6.1.15; 3.6.4.13; 
#=GS G4XII4/1476-1671      AC G4XII4
#=GS G4XII4/1476-1671      OS Tick-borne encephalitis virus
#=GS G4XII4/1476-1671      DE Genome polyprotein
#=GS G4XII4/1476-1671      DR ORG; Viruses; Flaviviridae; Flavivirus; Tick-borne encephalitis virus; 
#=GS G4XII4/1476-1671      DR GO; GO:0019079; 
#=GS P22338/1475-1673      AC P22338
#=GS P22338/1475-1673      OS Louping ill virus
#=GS P22338/1475-1673      DE Genome polyprotein
#=GS P22338/1475-1673      DR ORG; Viruses; Flaviviridae; Flavivirus; Louping ill virus; 
#=GS P22338/1475-1673      DR EC; 2.1.1.56; 2.1.1.57; 2.7.7.48; 3.4.21.91; 3.6.1.15; 3.6.4.13; 
#=GS P29837/1479-1673      AC P29837
#=GS P29837/1479-1673      OS Langat virus (strain TP21)
#=GS P29837/1479-1673      DE Genome polyprotein
#=GS P29837/1479-1673      DR ORG; Viruses; Flaviviridae; Flavivirus; Langat virus; 
#=GS P29837/1479-1673      DR EC; 2.1.1.56; 2.1.1.57; 2.7.7.48; 3.4.21.91; 3.6.1.15; 3.6.4.13; 
#=GS P07720/1476-1670      AC P07720
#=GS P07720/1476-1670      OS Tick-borne encephalitis virus (STRAIN SOFJIN)
#=GS P07720/1476-1670      DE Genome polyprotein
#=GS P07720/1476-1670      DR ORG; Viruses; Flaviviridae; Flavivirus; Tick-borne encephalitis virus; 
#=GS P07720/1476-1670      DR EC; 2.1.1.56; 2.1.1.57; 2.7.7.48; 3.4.21.91; 3.6.1.15; 3.6.4.13; 
#=GS P14336/1475-1673      AC P14336
#=GS P14336/1475-1673      OS Tick-borne encephalitis virus (WESTERN SUBTYPE)
#=GS P14336/1475-1673      DE Genome polyprotein
#=GS P14336/1475-1673      DR ORG; Viruses; Flaviviridae; Flavivirus; Tick-borne encephalitis virus; 
#=GS P14336/1475-1673      DR EC; 2.1.1.56; 2.1.1.57; 2.7.7.48; 3.4.21.91; 3.6.1.15; 3.6.4.13; 
#=GS Q88489/1475-1673      AC Q88489
#=GS Q88489/1475-1673      OS Tick-borne encephalitis virus
#=GS Q88489/1475-1673      DE Genome polyprotein
#=GS Q88489/1475-1673      DR ORG; Viruses; Flaviviridae; Flavivirus; Tick-borne encephalitis virus; 
#=GS A0A218KFE7/1476-1671  AC A0A218KFE7
#=GS A0A218KFE7/1476-1671  OS Tick-borne encephalitis virus
#=GS A0A218KFE7/1476-1671  DE Genome polyprotein
#=GS A0A218KFE7/1476-1671  DR ORG; Viruses; Flaviviridae; Flavivirus; Tick-borne encephalitis virus; 
#=GS I1VEB1/1476-1673      AC I1VEB1
#=GS I1VEB1/1476-1673      OS Tick-borne encephalitis virus
#=GS I1VEB1/1476-1673      DE Genome polyprotein
#=GS I1VEB1/1476-1673      DR ORG; Viruses; Flaviviridae; Flavivirus; Tick-borne encephalitis virus; 
#=GF SQ 9
Q01299/1474-1673              VMGLWTLTKMLRSSRRSDLVFSGQGGRERGDRPFEVKDGVYRIFSPGLFWGQNQVGVGYGSKGVLHTMWHVTRGAALSIDDAVAGPYWADVREDVVCYGGAWSLEEKWKGETVQVHAFPPGKAHEVHQCQPGELILDTGRKLGAIPIDLVKGTSGSPILNAQGVVVGLYGNGLKTNETYVSSIAQGEAEKSRPNLPQAVV
G4XII4/1476-1671              --GLWTLSEMLRTARRSDLVFSGQGGRERGDRPFEVKDGVYRIFSPGLLWGQRQVGVGYGSKGVLHTMWHVTRGAALYIDDAVAGPYWADVKEDVVCYGGAWSLEEKWKGETVQVHAFPPGRAHEVHQCQPGELLLDTGRRIGAVPIDLAKGTSGSPILNSQGVVVGLYGNGLKTNETYVSSIAQGEAEKSRPNLPPA--
P22338/1475-1673              -MGLWTLTEIMRSSRRSDLVYSGQGGQERGDRPFEVKDGVYRIFSPGLFWGQRQVGVGYGHKGVLHTMWHVTRGAALSIDDAVAGPYWADVKEDVVCYGGAWSLEEKWKGETVQVHAFPPGRAHEVHQCQPGELILDTGKRLGAIPIDLAKGTSGSPILNAQGVVVGLYGNGPKTNESYVSSIAQGEAEKSRPNLPQAVV
P29837/1479-1673              -----TISEMLGSPRRTDLVFSGCSEGRSDSRPLDVKNGVYRIYTPGLLWGQRQIGVGYGAKGVLHTMWHVTRGAALLVDGVAVGPYWADVREDVVCYGGAWSLESRWRGETVQVHAFPPGRAHETHQCQPGELILENGRKMGAIPIDLAKGTSGSPIMNSQGEVVGLYGNGLKTNDTYVSSIAQGEVEKSRPNLPQSVV
P07720/1476-1670              --GLWTLSEMLRTARRSGLVFSGQGGRERGDRPFEVKDGVYRIFSPGLLWGQRQVGVGYGSKGVLHTMWHVTRGAALSIDDAVAGPYWADVKEDVVCYGGAWSLEEKWKGETVQVHAFPPGRAHEVHQCQPGELLLDTGRRIGAVPIDLAKGTSGSPILNSQGVVVGLYGNGLKTNETYVSSIAQGEAEKSRPNLPP---
P14336/1475-1673              -MGLWTLTEMLRSSRRSDLVFSGQGGRERGDRPFEVKDGVYRIFSPGLFWGQNQVGVGYGSKGVLHTMWHVTRGAALSIDDAVAGPYWADVREDVVCYGGAWSLEEKWKGETVQVHAFPPGRAHEVHQCQPGELILDTGRKLGAIPIDLVKGTSGSPILNAQGVVVGLYGNGLKTNETYVSSIAQGEAEKSRPNLPQAVV
Q88489/1475-1673              -MGLWTLTEMLRSSRRSDLVFSGQGGRERGDRPFEVKDGVYRIFSPGLFWGQNQVGVGYGSKGVLHTMWHVTRGAALSIDDAVAGPYWSDVREDVVCYGGAWSLEEKWKGETVQVHAFPPGKAHEVHQCQPGELILDTGRKLGAIPIDLVKGTSGSPILNAQGVVVGLYGNGLKTNETYVSSIAQGEAEKSRPNLPQAVV
A0A218KFE7/1476-1671          --GLWTLSEMLRTARRSDLVFSGQGGRERGDRPFEVKDGVYRIFSPGLLWGQRQVGVGYGSKGVLHTMWHVTRGAALSIDDAVAGPYWADVKEDVVCYGGAWSLEEKWKGETVQVHAFPPGRAHEVHQCQPGELLLDTGRRIGAVPIDLAKGTSGSPILNSQGVVVGLYGNGLKTNETYVSSIAQGEAEKSRPNLPPA--
I1VEB1/1476-1673              --GLWTLSEMMRSARRSDLVFSGQGGRERGDRPFEVRDGVYRIFSPGLLWGQRQVGVGYGFKGVLHTMWHVTRGAALSIDDAVAGPYWADVKEDVVCYGGAWSLEEKWKGETVQVHAFPPGKAHEVHQCQPGELLLDTGRRVGAIPIDLAKGTSGSPIXNAQGAVVGLYGNGLKTNETYVSSIAQGEAEKSRPNLPQAVV
#=GC scorecons                01555966787664996799899566566669967986999997699969996979999949999999999999999579666699998996999999999999967979999999999997999699999999697698659979999699999999595995999999997999779999999996999999996544
#=GC scorecons_70             _____**_*****_*********_**_*_*******************************_****************_***************************_***********************************_****************_*_**_********************************____
#=GC scorecons_80             _____*__***___**_******________**_***_******_***_***_*******_****************_**____*******_*************_*******************_********_**_**__*******_********_*_**_***********************_********____
#=GC scorecons_90             _____*________**__*****________**__**_*****__***_***_*_*****_****************__*____****_**_*************__*_************_***_********_*__**__**_****_********_*_**_********_***__*********_********____
//