# STOCKHOLM 1.0
#=GF ID 2.30.30.490/FF/000021
#=GF DE Winged eye, isoform E
#=GF AC 2.30.30.490/FF/000021
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 14.445
#=GS Q3LHL9/1489-1657      AC Q3LHL9
#=GS Q3LHL9/1489-1657      OS Drosophila melanogaster
#=GS Q3LHL9/1489-1657      DE Protein winged eye
#=GS Q3LHL9/1489-1657      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q3LHL9/1489-1657      DR GO; GO:0000785; GO:0007560; 
#=GS A0A0B4KHX2/1491-1659  AC A0A0B4KHX2
#=GS A0A0B4KHX2/1491-1659  OS Drosophila melanogaster
#=GS A0A0B4KHX2/1491-1659  DE Winged eye, isoform E
#=GS A0A0B4KHX2/1491-1659  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0R3NFK5/1605-1776  AC A0A0R3NFK5
#=GS A0A0R3NFK5/1605-1776  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NFK5/1605-1776  DE Uncharacterized protein, isoform F
#=GS A0A0R3NFK5/1605-1776  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B5DVZ4/1602-1773      AC B5DVZ4
#=GS B5DVZ4/1602-1773      OS Drosophila pseudoobscura pseudoobscura
#=GS B5DVZ4/1602-1773      DE Uncharacterized protein, isoform B
#=GS B5DVZ4/1602-1773      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A0R3NFH7/1604-1775  AC A0A0R3NFH7
#=GS A0A0R3NFH7/1604-1775  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NFH7/1604-1775  DE Uncharacterized protein, isoform D
#=GS A0A0R3NFH7/1604-1775  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A1W4V8B4/1516-1683  AC A0A1W4V8B4
#=GS A0A1W4V8B4/1516-1683  OS Drosophila ficusphila
#=GS A0A1W4V8B4/1516-1683  DE protein winged eye isoform X1
#=GS A0A1W4V8B4/1516-1683  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A1W4V8R2/1506-1673  AC A0A1W4V8R2
#=GS A0A1W4V8R2/1506-1673  OS Drosophila ficusphila
#=GS A0A1W4V8R2/1506-1673  DE protein winged eye isoform X4
#=GS A0A1W4V8R2/1506-1673  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A0R3NFQ3/1613-1784  AC A0A0R3NFQ3
#=GS A0A0R3NFQ3/1613-1784  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NFQ3/1613-1784  DE Uncharacterized protein, isoform C
#=GS A0A0R3NFQ3/1613-1784  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A0R3NL63/1614-1785  AC A0A0R3NL63
#=GS A0A0R3NL63/1614-1785  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NL63/1614-1785  DE Uncharacterized protein, isoform E
#=GS A0A0R3NL63/1614-1785  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4R0P5/76-244         AC B4R0P5
#=GS B4R0P5/76-244         OS Drosophila simulans
#=GS B4R0P5/76-244         DE GD18436
#=GS B4R0P5/76-244         DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B4HES7/1404-1571      AC B4HES7
#=GS B4HES7/1404-1571      OS Drosophila sechellia
#=GS B4HES7/1404-1571      DE GM23624
#=GS B4HES7/1404-1571      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4G5W4/1608-1780      AC B4G5W4
#=GS B4G5W4/1608-1780      OS Drosophila persimilis
#=GS B4G5W4/1608-1780      DE GL23782
#=GS B4G5W4/1608-1780      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS A0A1W4VKG7/1515-1682  AC A0A1W4VKG7
#=GS A0A1W4VKG7/1515-1682  OS Drosophila ficusphila
#=GS A0A1W4VKG7/1515-1682  DE protein winged eye isoform X2
#=GS A0A1W4VKG7/1515-1682  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A1W4VL46/1507-1674  AC A0A1W4VL46
#=GS A0A1W4VL46/1507-1674  OS Drosophila ficusphila
#=GS A0A1W4VL46/1507-1674  DE protein winged eye isoform X3
#=GS A0A1W4VL46/1507-1674  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A1W4VLV3/1504-1671  AC A0A1W4VLV3
#=GS A0A1W4VLV3/1504-1671  OS Drosophila ficusphila
#=GS A0A1W4VLV3/1504-1671  DE protein winged eye isoform X5
#=GS A0A1W4VLV3/1504-1671  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B3P8K6/1486-1653      AC B3P8K6
#=GS B3P8K6/1486-1653      OS Drosophila erecta
#=GS B3P8K6/1486-1653      DE GG12492
#=GS B3P8K6/1486-1653      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS A0A0R1E505/1498-1665  AC A0A0R1E505
#=GS A0A0R1E505/1498-1665  OS Drosophila yakuba
#=GS A0A0R1E505/1498-1665  DE Uncharacterized protein, isoform E
#=GS A0A0R1E505/1498-1665  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS A0A0R1E4F4/1489-1656  AC A0A0R1E4F4
#=GS A0A0R1E4F4/1489-1656  OS Drosophila yakuba
#=GS A0A0R1E4F4/1489-1656  DE Uncharacterized protein, isoform B
#=GS A0A0R1E4F4/1489-1656  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS A0A0R1E4E4/1488-1655  AC A0A0R1E4E4
#=GS A0A0R1E4E4/1488-1655  OS Drosophila yakuba
#=GS A0A0R1E4E4/1488-1655  DE Uncharacterized protein, isoform C
#=GS A0A0R1E4E4/1488-1655  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS A0A0R1E5Q5/1497-1664  AC A0A0R1E5Q5
#=GS A0A0R1E5Q5/1497-1664  OS Drosophila yakuba
#=GS A0A0R1E5Q5/1497-1664  DE Uncharacterized protein, isoform D
#=GS A0A0R1E5Q5/1497-1664  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B4PME4/1486-1653      AC B4PME4
#=GS B4PME4/1486-1653      OS Drosophila yakuba
#=GS B4PME4/1486-1653      DE Uncharacterized protein, isoform A
#=GS B4PME4/1486-1653      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 21
Q3LHL9/1489-1657              ------------RKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETTTGNKVVRVAWFYHPEETTGCPKLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTNTTTTTTETTTE
A0A0B4KHX2/1491-1659          ------------RKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETTTGNKVVRVAWFYHPEETTGCPKLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTNTTTTTTETTTE
A0A0R3NFK5/1605-1776          ERQLWGWNGVAYRKGGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETSTGNKVVRVAWFYHPEETTGCPKLKYPGALFESSHDDENDVQTISHRCEVLQFGHYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TT--------
B5DVZ4/1602-1773              ERQLWGWNGVAYRKGGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETSTGNKVVRVAWFYHPEETTGCPKLKYPGALFESSHDDENDVQTISHRCEVLQFGHYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TT--------
A0A0R3NFH7/1604-1775          ERQLWGWNGVAYRKGGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETSTGNKVVRVAWFYHPEETTGCPKLKYPGALFESSHDDENDVQTISHRCEVLQFGHYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TT--------
A0A1W4V8B4/1516-1683          ------------RKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETSTGNKVVRVAWFYHPEETTGCPMLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFDKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TTTTTETTTE
A0A1W4V8R2/1506-1673          ------------RKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETSTGNKVVRVAWFYHPEETTGCPMLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFDKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TTTTTETTTE
A0A0R3NFQ3/1613-1784          ERQLWGWNGVAYRKGGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETSTGNKVVRVAWFYHPEETTGCPKLKYPGALFESSHDDENDVQTISHRCEVLQFGHYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TT--------
A0A0R3NL63/1614-1785          ERQLWGWNGVAYRKGGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETSTGNKVVRVAWFYHPEETTGCPKLKYPGALFESSHDDENDVQTISHRCEVLQFGHYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TT--------
B4R0P5/76-244                 -----------YRKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETTTGNKVVRVAWFYHPEETTGCPKLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TTTTTETTTE
B4HES7/1404-1571              ------------RKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETTTGNKVVRVAWFYHPEETTGCPKLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TTTTTETTTE
B4G5W4/1608-1780              ERQLWGWNGVAYRKGGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETSTGNKVVRVAWFYHPEETTGCPKLKYPGALFESSHDDENDVQTISHRCEVLQFGHYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TTT-------
A0A1W4VKG7/1515-1682          ------------RKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETSTGNKVVRVAWFYHPEETTGCPMLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFDKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TTTTTETTTE
A0A1W4VL46/1507-1674          ------------RKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETSTGNKVVRVAWFYHPEETTGCPMLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFDKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TTTTTETTTE
A0A1W4VLV3/1504-1671          ------------RKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETSTGNKVVRVAWFYHPEETTGCPMLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFDKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TTTTTETTTE
B3P8K6/1486-1653              ------------RKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETTTGNKVVRVAWFYHPEETTGCPKLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TTTTTETTTE
A0A0R1E505/1498-1665          ------------RKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETTTGNKVVRVAWFYHPEETTGCPKLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TTTTTETTTE
A0A0R1E4F4/1489-1656          ------------RKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETTTGNKVVRVAWFYHPEETTGCPKLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TTTTTETTTE
A0A0R1E4E4/1488-1655          ------------RKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETTTGNKVVRVAWFYHPEETTGCPKLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TTTTTETTTE
A0A0R1E5Q5/1497-1664          ------------RKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETTTGNKVVRVAWFYHPEETTGCPKLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TTTTTETTTE
B4PME4/1486-1653              ------------RKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETTTGNKVVRVAWFYHPEETTGCPKLKFPGALFESPHEDENDVQTISHRCEVLQFGSYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIPTLEELQDTN-TTTTTETTTE
#=GC scorecons                1111111111129969999999999999999999999999999999999999999999999999699999999999999999999969979999999697999999999999999999599799999999999999999999999999999999999999999999999909932222222
#=GC scorecons_70             ____________**_**********************************************************************************_********************_***************************************************_**________
#=GC scorecons_80             ____________**_*************************************************_*********************_**********_*_******************_***************************************************_**________
#=GC scorecons_90             ____________**_*************************************************_*********************_**_*******_*_******************_**_************************************************_**________
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