# STOCKHOLM 1.0 #=GF ID 2.30.30.140/FF/000093 #=GF DE DNA mismatch repair protein #=GF AC 2.30.30.140/FF/000093 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 82.123 #=GS O04716/119-168 AC O04716 #=GS O04716/119-168 OS Arabidopsis thaliana #=GS O04716/119-168 DE DNA mismatch repair protein MSH6 #=GS O04716/119-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS O04716/119-168 DR GO; GO:0003684; GO:0005515; GO:0006290; GO:0006298; #=GS F4JH76/119-168 AC F4JH76 #=GS F4JH76/119-168 OS Arabidopsis thaliana #=GS F4JH76/119-168 DE DNA mismatch repair protein #=GS F4JH76/119-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS F6HZ94/88-141 AC F6HZ94 #=GS F6HZ94/88-141 OS Vitis vinifera #=GS F6HZ94/88-141 DE DNA mismatch repair protein #=GS F6HZ94/88-141 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS A5BEQ5/96-149 AC A5BEQ5 #=GS A5BEQ5/96-149 OS Vitis vinifera #=GS A5BEQ5/96-149 DE DNA mismatch repair protein #=GS A5BEQ5/96-149 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS Q69MX6/61-115 AC Q69MX6 #=GS Q69MX6/61-115 OS Oryza sativa Japonica Group #=GS Q69MX6/61-115 DE DNA mismatch repair protein #=GS Q69MX6/61-115 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0A0N7KQS3/60-114 AC A0A0N7KQS3 #=GS A0A0N7KQS3/60-114 OS Oryza sativa Japonica Group #=GS A0A0N7KQS3/60-114 DE Os09g0407600 protein #=GS A0A0N7KQS3/60-114 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0A2K1KQE0/515-562 AC A0A2K1KQE0 #=GS A0A2K1KQE0/515-562 OS Physcomitrella patens #=GS A0A2K1KQE0/515-562 DE Histone-lysine N-methyltransferase #=GS A0A2K1KQE0/515-562 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; #=GS A9SPZ8/536-583 AC A9SPZ8 #=GS A9SPZ8/536-583 OS Physcomitrella patens #=GS A9SPZ8/536-583 DE Histone-lysine N-methyltransferase #=GS A9SPZ8/536-583 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; #=GS R0FCI0/115-166 AC R0FCI0 #=GS R0FCI0/115-166 OS Capsella rubella #=GS R0FCI0/115-166 DE DNA mismatch repair protein #=GS R0FCI0/115-166 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS I1IQ01/109-168 AC I1IQ01 #=GS I1IQ01/109-168 OS Brachypodium distachyon #=GS I1IQ01/109-168 DE DNA mismatch repair protein #=GS I1IQ01/109-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A1D6I437/91-146 AC A0A1D6I437 #=GS A0A1D6I437/91-146 OS Zea mays #=GS A0A1D6I437/91-146 DE DNA mismatch repair protein #=GS A0A1D6I437/91-146 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A0E0ES20/61-115 AC A0A0E0ES20 #=GS A0A0E0ES20/61-115 OS Oryza meridionalis #=GS A0A0E0ES20/61-115 DE DNA mismatch repair protein #=GS A0A0E0ES20/61-115 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; #=GS A0A0D3H6Q7/61-115 AC A0A0D3H6Q7 #=GS A0A0D3H6Q7/61-115 OS Oryza barthii #=GS A0A0D3H6Q7/61-115 DE DNA mismatch repair protein #=GS A0A0D3H6Q7/61-115 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0E0B2T0/61-115 AC A0A0E0B2T0 #=GS A0A0E0B2T0/61-115 OS Oryza glumipatula #=GS A0A0E0B2T0/61-115 DE DNA mismatch repair protein #=GS A0A0E0B2T0/61-115 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0E0QR90/61-115 AC A0A0E0QR90 #=GS A0A0E0QR90/61-115 OS Oryza rufipogon #=GS A0A0E0QR90/61-115 DE DNA mismatch repair protein #=GS A0A0E0QR90/61-115 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS I1QNV4/61-115 AC I1QNV4 #=GS I1QNV4/61-115 OS Oryza glaberrima #=GS I1QNV4/61-115 DE DNA mismatch repair protein #=GS I1QNV4/61-115 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; #=GS A0A0E0IJC9/61-115 AC A0A0E0IJC9 #=GS A0A0E0IJC9/61-115 OS Oryza sativa f. spontanea #=GS A0A0E0IJC9/61-115 DE DNA mismatch repair protein #=GS A0A0E0IJC9/61-115 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; #=GS R0FD75/115-166 AC R0FD75 #=GS R0FD75/115-166 OS Capsella rubella #=GS R0FD75/115-166 DE DNA mismatch repair protein #=GS R0FD75/115-166 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS A0A0E0ES18/61-115 AC A0A0E0ES18 #=GS A0A0E0ES18/61-115 OS Oryza meridionalis #=GS A0A0E0ES18/61-115 DE DNA mismatch repair protein #=GS A0A0E0ES18/61-115 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; #=GS A2Z145/61-115 AC A2Z145 #=GS A2Z145/61-115 OS Oryza sativa Indica Group #=GS A2Z145/61-115 DE DNA mismatch repair protein #=GS A2Z145/61-115 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0A0E0ES17/61-115 AC A0A0E0ES17 #=GS A0A0E0ES17/61-115 OS Oryza meridionalis #=GS A0A0E0ES17/61-115 DE DNA mismatch repair protein #=GS A0A0E0ES17/61-115 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; #=GS A0A0E0ES21/61-115 AC A0A0E0ES21 #=GS A0A0E0ES21/61-115 OS Oryza meridionalis #=GS A0A0E0ES21/61-115 DE DNA mismatch repair protein #=GS A0A0E0ES21/61-115 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; #=GS A0A0E0ES22/61-115 AC A0A0E0ES22 #=GS A0A0E0ES22/61-115 OS Oryza meridionalis #=GS A0A0E0ES22/61-115 DE Uncharacterized protein #=GS A0A0E0ES22/61-115 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; #=GS A0A1D6I436/91-146 AC A0A1D6I436 #=GS A0A1D6I436/91-146 OS Zea mays #=GS A0A1D6I436/91-146 DE DNA mismatch repair protein #=GS A0A1D6I436/91-146 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6I438/91-146 AC A0A1D6I438 #=GS A0A1D6I438/91-146 OS Zea mays #=GS A0A1D6I438/91-146 DE DNA mismatch repair protein #=GS A0A1D6I438/91-146 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6I440/91-146 AC A0A1D6I440 #=GS A0A1D6I440/91-146 OS Zea mays #=GS A0A1D6I440/91-146 DE DNA mismatch repair protein #=GS A0A1D6I440/91-146 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6I441/91-146 AC A0A1D6I441 #=GS A0A1D6I441/91-146 OS Zea mays #=GS A0A1D6I441/91-146 DE Mismatch binding protein Mus3 #=GS A0A1D6I441/91-146 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6I439/91-146 AC A0A1D6I439 #=GS A0A1D6I439/91-146 OS Zea mays #=GS A0A1D6I439/91-146 DE Mismatch binding protein Mus3 #=GS A0A1D6I439/91-146 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GF SQ 28 O04716/119-168 ------TYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDL---- F4JH76/119-168 ------TYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDL---- F6HZ94/88-141 ---GSKSYGEEVVNRRVKVYWPLDKSWYVGCVKSFDELTGEHLVQYDDADEETLDLG--- A5BEQ5/96-149 ---GSKSYGEEVVNRRVKVYWPLDKSWYVGCVKSFDELTGEHLVQYDDADEETLDLG--- Q69MX6/61-115 ----PPQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASE- A0A0N7KQS3/60-114 ----PPQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASE- A0A2K1KQE0/515-562 -----------LVGLRIKIWWPLDQKFYHGEVLSFDGSSGKHQVCYDDGEKEALCLVKE- A9SPZ8/536-583 -----------LVGLRIKIWWPLDQKFYHGEVLSFDGSSGKHQVCYDDGEKEALCLVKE- R0FCI0/115-166 ----EIKYGDEVVGRQVRVYWPLDKRWYDGSVTFYDKGVGKHVVEYEDGEEESLDL---- I1IQ01/109-168 EQNASAAPAGEAVGRRLRVYWPLDDAWYEGRVDDYDEGSRRHRVKYDDGEDEEVDLRKEK A0A1D6I437/91-146 ----PAPAAAEVVGRCLRVYWPLDDAWYKGKVEAYDAASRRHRVKYDDGDEEEVDLRKEK A0A0E0ES20/61-115 ----PPQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASE- A0A0D3H6Q7/61-115 ----PPQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASE- A0A0E0B2T0/61-115 ----PPQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASE- A0A0E0QR90/61-115 ----PPQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASE- I1QNV4/61-115 ----PPQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASE- A0A0E0IJC9/61-115 ----PPQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASE- R0FD75/115-166 ----EIKYGDEVVGRQVRVYWPLDKRWYDGSVTFYDKGVGKHVVEYEDGEEESLDL---- A0A0E0ES18/61-115 ----PPQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASE- A2Z145/61-115 ----PPQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASE- A0A0E0ES17/61-115 ----PPQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASE- A0A0E0ES21/61-115 ----PPQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASE- A0A0E0ES22/61-115 ----PPQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASE- A0A1D6I436/91-146 ----PAPAAAEVVGRCLRVYWPLDDAWYKGKVEAYDAASRRHRVKYDDGDEEEVDLRKEK A0A1D6I438/91-146 ----PAPAAAEVVGRCLRVYWPLDDAWYKGKVEAYDAASRRHRVKYDDGDEEEVDLRKEK A0A1D6I440/91-146 ----PAPAAAEVVGRCLRVYWPLDDAWYKGKVEAYDAASRRHRVKYDDGDEEEVDLRKEK A0A1D6I441/91-146 ----PAPAAAEVVGRCLRVYWPLDDAWYKGKVEAYDAASRRHRVKYDDGDEEEVDLRKEK A0A1D6I439/91-146 ----PAPAAAEVVGRCLRVYWPLDDAWYKGKVEAYDAASRRHRVKYDDGDEEEVDLRKEK #=GC scorecons 000032323445976567879999557949494379355569494979777936792240 #=GC scorecons_70 ____________***__*******__**_*_*__**____**_*_*******_***____ #=GC scorecons_80 ____________**___*******__**_*_*__**_____*_*_*******__**____ #=GC scorecons_90 ____________*_____*_****___*_*_*___*_____*_*_*_*___*___*____ //