# STOCKHOLM 1.0 #=GF ID 2.30.30.100/FF/000081 #=GF DE U6 snRNA-associated Sm-like protein LSm8p #=GF AC 2.30.30.100/FF/000081 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 67.419 #=GS Q6QA14/1-44_75-125 AC Q6QA14 #=GS Q6QA14/1-44_75-125 OS Trypanosoma brucei #=GS Q6QA14/1-44_75-125 DE Lsm8p #=GS Q6QA14/1-44_75-125 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; #=GS Q6QA14/1-44_75-125 DR GO; GO:0000244; GO:0000365; GO:0000398; GO:0005634; GO:0005688; GO:0010608; GO:0030629; GO:0043487; GO:0045292; GO:0046540; #=GS Q75CP4/1-104 AC Q75CP4 #=GS Q75CP4/1-104 OS Eremothecium gossypii ATCC 10895 #=GS Q75CP4/1-104 DE U6 snRNA-associated Sm-like protein LSm8 #=GS Q75CP4/1-104 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; #=GS A4I1L8/1-47_84-125 AC A4I1L8 #=GS A4I1L8/1-47_84-125 OS Leishmania infantum #=GS A4I1L8/1-47_84-125 DE LSM_domain_containing_protein_-_putative #=GS A4I1L8/1-47_84-125 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; #=GS A0A1G4I027/1-44_75-125 AC A0A1G4I027 #=GS A0A1G4I027/1-44_75-125 OS Trypanosoma equiperdum #=GS A0A1G4I027/1-44_75-125 DE U6 snRNA-associated Sm-like protein LSm8p #=GS A0A1G4I027/1-44_75-125 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; #=GS A4HEH2/1-47_83-126 AC A4HEH2 #=GS A4HEH2/1-47_83-126 OS Leishmania braziliensis #=GS A4HEH2/1-47_83-126 DE Uncharacterized protein #=GS A4HEH2/1-47_83-126 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; #=GS D6XD86/1-44_75-125 AC D6XD86 #=GS D6XD86/1-44_75-125 OS Trypanosoma brucei brucei TREU927 #=GS D6XD86/1-44_75-125 DE U6 snRNA-associated Sm-like protein LSm8p #=GS D6XD86/1-44_75-125 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; #=GS D6XD86/1-44_75-125 DR GO; GO:0000244; GO:0000365; GO:0000398; GO:0005634; GO:0005688; GO:0010608; GO:0030629; GO:0043487; GO:0045292; GO:0046540; #=GS Q4Q9R9/1-47_84-124 AC Q4Q9R9 #=GS Q4Q9R9/1-47_84-124 OS Leishmania major #=GS Q4Q9R9/1-47_84-124 DE Uncharacterized protein #=GS Q4Q9R9/1-47_84-124 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; #=GS A0A088SBJ0/1-47_83-126 AC A0A088SBJ0 #=GS A0A088SBJ0/1-47_83-126 OS Leishmania panamensis #=GS A0A088SBJ0/1-47_83-126 DE Uncharacterized protein #=GS A0A088SBJ0/1-47_83-126 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania panamensis; #=GS E9AXQ2/1-47_84-125 AC E9AXQ2 #=GS E9AXQ2/1-47_84-125 OS Leishmania mexicana MHOM/GT/2001/U1103 #=GS E9AXQ2/1-47_84-125 DE Uncharacterized protein #=GS E9AXQ2/1-47_84-125 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; #=GS A0A1E1IY27/1-47_83-126 AC A0A1E1IY27 #=GS A0A1E1IY27/1-47_83-126 OS Leishmania guyanensis #=GS A0A1E1IY27/1-47_83-126 DE Uncharacterized protein #=GS A0A1E1IY27/1-47_83-126 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania guyanensis; #=GS E9BHT2/1-47_84-125 AC E9BHT2 #=GS E9BHT2/1-47_84-125 OS Leishmania donovani BPK282A1 #=GS E9BHT2/1-47_84-125 DE Uncharacterized protein #=GS E9BHT2/1-47_84-125 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; #=GS A0A3P3Z8K8/1-47_83-126 AC A0A3P3Z8K8 #=GS A0A3P3Z8K8/1-47_83-126 OS Leishmania braziliensis MHOM/BR/75/M2904 #=GS A0A3P3Z8K8/1-47_83-126 DE LSM_domain_containing_protein #=GS A0A3P3Z8K8/1-47_83-126 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; #=GS A0A3Q8IFD7/1-47_84-125 AC A0A3Q8IFD7 #=GS A0A3Q8IFD7/1-47_84-125 OS Leishmania donovani #=GS A0A3Q8IFD7/1-47_84-125 DE LSM domain containing protein, putative #=GS A0A3Q8IFD7/1-47_84-125 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; #=GF SQ 13 Q6QA14/1-44_75-125 ---MLSQYLRRRVSVVTVDGRYLVGVLHAADQLMNLVLTSCAERV---FDEHSLGVLMIRGSDVVCVASVN--TVEEAKLSRKLWRGRNLPVVER----VARSATAS Q75CP4/1-104 MSPLLKEYLGRRVVVVTTDGGCLVATLEGFDKTANLLLSDVRQRA---TGEGLAAAFLLQGSQIVCCGPLEGGGPEQEPQAAALRDTRNVVAREHDIWARAWQARQA A4I1L8/1-47_84-125 ---MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDEVQLGVMMLRGADVVSIAAID--VYEEAGTNVKDWRGRDMP-----------PAT-- A0A1G4I027/1-44_75-125 ---MLSQYLRRRVSVVTVDGRYLVGVLHAADQLMNLVLTSCAERV---FDEHSLGVLMIRGSDVVCVASVN--TVEEAKLSRKLWRGRNLPVVER----VARSATAS A4HEH2/1-47_83-126 ---MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDEVQLGVMMVRGSDVVTIAAID--VYEEAGTNIKDWRGRDMP-----------PAAAA D6XD86/1-44_75-125 ---MLSQYLRRRVSVVTVDGRYLVGVLHAADQLMNLVLTSCAERV---FDEHSLGVLMIRGSDVVCVASVN--TVEEAKLSRKLWRGRNLPVVER----VARSATAS Q4Q9R9/1-47_84-124 ---MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDEVHLGVMMLRGADVVSIAAID--VYEEAGTNVKDWRGRDMP-----------PA--- A0A088SBJ0/1-47_83-126 ---MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDEVQLGVMMVRGSDVVTIAAID--VYEEAGTNIKDWRGRDMP-----------PAAAA E9AXQ2/1-47_84-125 ---MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDEVQLGVMMLRGADVVSIAAID--VYEEAGTNVKDWRGRDMP-----------PAT-- A0A1E1IY27/1-47_83-126 ---MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDEVQLGVMMVRGSDVVTIAAID--VYEEAGTNIKDWRGRDMP-----------PAAAA E9BHT2/1-47_84-125 ---MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDEVQLGVMMLRGADVVSIAAID--VYEEAGTNVKDWRGRDMP-----------PAT-- A0A3P3Z8K8/1-47_83-126 ---MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDEVQLGVMMVRGSDVVTIAAID--VYEEAGTNIKDWRGRDMP-----------PAAAA A0A3Q8IFD7/1-47_84-125 ---MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDEVQLGVMMLRGADVVSIAAID--VYEEAGTNVKDWRGRDMP-----------PAT-- #=GC scorecons 00079679966996999699649966966697659679666479522256933666575796679456565004397644536466696561011000001149422 #=GC scorecons_70 ___******************_*******_***_*******_**_____**__***_*_******__*_______***____*_*****_*____________*___ #=GC scorecons_80 ___**_***__**_***_**__**__*___**__*_**____**______*______*_**__**__________**__________*_______________*___ #=GC scorecons_90 ____*__**__**_***_**__**__*___*___*__*_____*______*_________*___*__________*___________*_______________*___ //