# STOCKHOLM 1.0
#=GF ID 2.30.30.100/FF/000060
#=GF DE LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
#=GF AC 2.30.30.100/FF/000060
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 56.778
#=GS B8ZZF8/13-61      AC B8ZZF8
#=GS B8ZZF8/13-61      OS Homo sapiens
#=GS B8ZZF8/13-61      DE U6 snRNA-associated Sm-like protein LSm5
#=GS B8ZZF8/13-61      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS A0A1D8PFX4/11-77  AC A0A1D8PFX4
#=GS A0A1D8PFX4/11-77  OS Candida albicans SC5314
#=GS A0A1D8PFX4/11-77  DE RNA-binding protein
#=GS A0A1D8PFX4/11-77  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS A0A3Q4H8K0/10-47  AC A0A3Q4H8K0
#=GS A0A3Q4H8K0/10-47  OS Neolamprologus brichardi
#=GS A0A3Q4H8K0/10-47  DE LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
#=GS A0A3Q4H8K0/10-47  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Cichlomorphae; Cichliformes; Cichlidae; Pseudocrenilabrinae; Lamprologini; Neolamprologus; Neolamprologus brichardi; 
#=GS A0A337S4U6/13-62  AC A0A337S4U6
#=GS A0A337S4U6/13-62  OS Felis catus
#=GS A0A337S4U6/13-62  DE Uncharacterized protein
#=GS A0A337S4U6/13-62  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; 
#=GS J9P5Z8/13-51      AC J9P5Z8
#=GS J9P5Z8/13-51      OS Canis lupus familiaris
#=GS J9P5Z8/13-51      DE Uncharacterized protein
#=GS J9P5Z8/13-51      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris; 
#=GS A0A2K5SHZ0/13-60  AC A0A2K5SHZ0
#=GS A0A2K5SHZ0/13-60  OS Cebus capucinus imitator
#=GS A0A2K5SHZ0/13-60  DE Uncharacterized protein
#=GS A0A2K5SHZ0/13-60  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus; Cebus capucinus; Cebus capucinus imitator; 
#=GS A0A2I3LRW0/13-61  AC A0A2I3LRW0
#=GS A0A2I3LRW0/13-61  OS Papio anubis
#=GS A0A2I3LRW0/13-61  DE Uncharacterized protein
#=GS A0A2I3LRW0/13-61  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; 
#=GS A0A2K5EJU9/13-60  AC A0A2K5EJU9
#=GS A0A2K5EJU9/13-60  OS Aotus nancymaae
#=GS A0A2K5EJU9/13-60  DE Uncharacterized protein
#=GS A0A2K5EJU9/13-60  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS A0A2I3HGB8/13-61  AC A0A2I3HGB8
#=GS A0A2I3HGB8/13-61  OS Nomascus leucogenys
#=GS A0A2I3HGB8/13-61  DE Uncharacterized protein
#=GS A0A2I3HGB8/13-61  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS A0A2K6S4T4/13-60  AC A0A2K6S4T4
#=GS A0A2K6S4T4/13-60  OS Saimiri boliviensis boliviensis
#=GS A0A2K6S4T4/13-60  DE LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
#=GS A0A2K6S4T4/13-60  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri; Saimiri boliviensis; Saimiri boliviensis boliviensis; 
#=GS F6Y0T2/13-61      AC F6Y0T2
#=GS F6Y0T2/13-61      OS Callithrix jacchus
#=GS F6Y0T2/13-61      DE LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
#=GS F6Y0T2/13-61      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS A0A2K5JUM0/13-61  AC A0A2K5JUM0
#=GS A0A2K5JUM0/13-61  OS Colobus angolensis palliatus
#=GS A0A2K5JUM0/13-61  DE Uncharacterized protein
#=GS A0A2K5JUM0/13-61  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus; Colobus angolensis; Colobus angolensis palliatus; 
#=GS A0A2I2YHU0/13-61  AC A0A2I2YHU0
#=GS A0A2I2YHU0/13-61  OS Gorilla gorilla gorilla
#=GS A0A2I2YHU0/13-61  DE LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
#=GS A0A2I2YHU0/13-61  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS A0A2R8Z7T9/13-61  AC A0A2R8Z7T9
#=GS A0A2R8Z7T9/13-61  OS Pan paniscus
#=GS A0A2R8Z7T9/13-61  DE Uncharacterized protein
#=GS A0A2R8Z7T9/13-61  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; 
#=GS A0A2K5XR15/13-61  AC A0A2K5XR15
#=GS A0A2K5XR15/13-61  OS Mandrillus leucophaeus
#=GS A0A2K5XR15/13-61  DE Uncharacterized protein
#=GS A0A2K5XR15/13-61  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Mandrillus; Mandrillus leucophaeus; 
#=GS A0A1D5R134/13-61  AC A0A1D5R134
#=GS A0A1D5R134/13-61  OS Macaca mulatta
#=GS A0A1D5R134/13-61  DE Uncharacterized protein
#=GS A0A1D5R134/13-61  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS A0A2K5NBD6/13-61  AC A0A2K5NBD6
#=GS A0A2K5NBD6/13-61  OS Cercocebus atys
#=GS A0A2K5NBD6/13-61  DE Uncharacterized protein
#=GS A0A2K5NBD6/13-61  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; 
#=GS A0A2K5WM98/13-61  AC A0A2K5WM98
#=GS A0A2K5WM98/13-61  OS Macaca fascicularis
#=GS A0A2K5WM98/13-61  DE Uncharacterized protein
#=GS A0A2K5WM98/13-61  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS A0A2J8KL73/13-61  AC A0A2J8KL73
#=GS A0A2J8KL73/13-61  OS Pan troglodytes
#=GS A0A2J8KL73/13-61  DE LSM5 isoform 6
#=GS A0A2J8KL73/13-61  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GF SQ 19
B8ZZF8/13-61              LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKSHQKEEG--------
A0A1D8PFX4/11-77          LPLEVIDRSVGKRVRVLMTGDKEFNGKLIGFDDYVNMVLEDVTEVDGGAPIKKMLLNGGHIAMIVPE
A0A3Q4H8K0/10-47          LPLELVDKCIGSRIHIVMKTDKEIVGTLLGFDDFVSIF-----------------------------
A0A337S4U6/13-62          LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKSHQKEEG-------S
J9P5Z8/13-51              LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILS----------------------------
A0A2K5SHZ0/13-60          LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKLHQKEE---------
A0A2I3LRW0/13-61          LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKSHQKEEG--------
A0A2K5EJU9/13-60          LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKLHQKEE---------
A0A2I3HGB8/13-61          LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKSHQKEEG--------
A0A2K6S4T4/13-60          LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKLHQKEE---------
F6Y0T2/13-61              LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKLHRKEEG--------
A0A2K5JUM0/13-61          LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKSHQKEEG--------
A0A2I2YHU0/13-61          LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKSHQKEEG--------
A0A2R8Z7T9/13-61          LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKSHQKEEG--------
A0A2K5XR15/13-61          LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKSHQKEEG--------
A0A1D5R134/13-61          LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKSHQKEEG--------
A0A2K5NBD6/13-61          LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKSHQKEEG--------
A0A2K5WM98/13-61          LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKSHQKEEG--------
A0A2J8KL73/13-61          LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLK----------VKSHQKEEG--------
#=GC scorecons            9999679767969767696599965969699997967653000000000045232233300000000
#=GC scorecons_70         ***********_******__****_*_**********______________________________
#=GC scorecons_80         ****_***_**_**_*_*__***__*_*_******_*______________________________
#=GC scorecons_90         ****__*___*_*____*__***__*_*_****_*________________________________
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