# STOCKHOLM 1.0 #=GF ID 2.30.30.100/FF/000057 #=GF DE LSM1 homolog, mRNA degradation associated #=GF AC 2.30.30.100/FF/000057 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 7.500 #=GS E5RH18/7-39 AC E5RH18 #=GS E5RH18/7-39 OS Homo sapiens #=GS E5RH18/7-39 DE LSM1-like protein U6 small nuclear RNA associated isoform 3 #=GS E5RH18/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS E5RJ47/7-40 AC E5RJ47 #=GS E5RJ47/7-40 OS Homo sapiens #=GS E5RJ47/7-40 DE U6 snRNA-associated Sm-like protein LSm1 #=GS E5RJ47/7-40 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS A0A337SJA0/7-39 AC A0A337SJA0 #=GS A0A337SJA0/7-39 OS Felis catus #=GS A0A337SJA0/7-39 DE Uncharacterized protein #=GS A0A337SJA0/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; #=GS A0A3Q1LUP3/82-114 AC A0A3Q1LUP3 #=GS A0A3Q1LUP3/82-114 OS Bos taurus #=GS A0A3Q1LUP3/82-114 DE U6 snRNA-associated Sm-like protein LSm1 #=GS A0A3Q1LUP3/82-114 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; #=GS A0A2K6FVQ8/7-39 AC A0A2K6FVQ8 #=GS A0A2K6FVQ8/7-39 OS Propithecus coquereli #=GS A0A2K6FVQ8/7-39 DE Uncharacterized protein #=GS A0A2K6FVQ8/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus; Propithecus coquereli; #=GS A0A2K5DGB1/7-39 AC A0A2K5DGB1 #=GS A0A2K5DGB1/7-39 OS Aotus nancymaae #=GS A0A2K5DGB1/7-39 DE Uncharacterized protein #=GS A0A2K5DGB1/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; #=GS F6Q0L1/7-39 AC F6Q0L1 #=GS F6Q0L1/7-39 OS Macaca mulatta #=GS F6Q0L1/7-39 DE Uncharacterized protein #=GS F6Q0L1/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; #=GS A0A2K5SE89/7-39 AC A0A2K5SE89 #=GS A0A2K5SE89/7-39 OS Cebus capucinus imitator #=GS A0A2K5SE89/7-39 DE Uncharacterized protein #=GS A0A2K5SE89/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus; Cebus capucinus; Cebus capucinus imitator; #=GS A0A2I3H617/7-39 AC A0A2I3H617 #=GS A0A2I3H617/7-39 OS Nomascus leucogenys #=GS A0A2I3H617/7-39 DE Uncharacterized protein #=GS A0A2I3H617/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; #=GS A0A2R8PAB8/7-39 AC A0A2R8PAB8 #=GS A0A2R8PAB8/7-39 OS Callithrix jacchus #=GS A0A2R8PAB8/7-39 DE Uncharacterized protein #=GS A0A2R8PAB8/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; #=GS A0A2J8TP81/7-39 AC A0A2J8TP81 #=GS A0A2J8TP81/7-39 OS Pongo abelii #=GS A0A2J8TP81/7-39 DE LSM1 isoform 4 #=GS A0A2J8TP81/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; #=GS A0A2K6K7B8/7-39 AC A0A2K6K7B8 #=GS A0A2K6K7B8/7-39 OS Rhinopithecus bieti #=GS A0A2K6K7B8/7-39 DE Uncharacterized protein #=GS A0A2K6K7B8/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus bieti; #=GS A0A2I3M0P0/7-39 AC A0A2I3M0P0 #=GS A0A2I3M0P0/7-39 OS Papio anubis #=GS A0A2I3M0P0/7-39 DE Uncharacterized protein #=GS A0A2I3M0P0/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; #=GS A0A2R9ATT0/7-39 AC A0A2R9ATT0 #=GS A0A2R9ATT0/7-39 OS Pan paniscus #=GS A0A2R9ATT0/7-39 DE Uncharacterized protein #=GS A0A2R9ATT0/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; #=GS A0A2K5YYQ4/7-39 AC A0A2K5YYQ4 #=GS A0A2K5YYQ4/7-39 OS Mandrillus leucophaeus #=GS A0A2K5YYQ4/7-39 DE Uncharacterized protein #=GS A0A2K5YYQ4/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Mandrillus; Mandrillus leucophaeus; #=GS A0A2I2ZX52/7-39 AC A0A2I2ZX52 #=GS A0A2I2ZX52/7-39 OS Gorilla gorilla gorilla #=GS A0A2I2ZX52/7-39 DE LSM1 homolog, mRNA degradation associated #=GS A0A2I2ZX52/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; #=GS A0A2K5HMT5/7-39 AC A0A2K5HMT5 #=GS A0A2K5HMT5/7-39 OS Colobus angolensis palliatus #=GS A0A2K5HMT5/7-39 DE Uncharacterized protein #=GS A0A2K5HMT5/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus; Colobus angolensis; Colobus angolensis palliatus; #=GS A0A2K5L0W9/7-39 AC A0A2K5L0W9 #=GS A0A2K5L0W9/7-39 OS Cercocebus atys #=GS A0A2K5L0W9/7-39 DE Uncharacterized protein #=GS A0A2K5L0W9/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; #=GS Q4R369/7-39 AC Q4R369 #=GS Q4R369/7-39 OS Macaca fascicularis #=GS Q4R369/7-39 DE Testis cDNA clone: QtsA-19240, similar to human LSM1 homolog, U6 small nuclear RNA associated (S.cerevisiae) (LSM1) #=GS Q4R369/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; #=GS A0A2I3SGD8/7-39 AC A0A2I3SGD8 #=GS A0A2I3SGD8/7-39 OS Pan troglodytes #=GS A0A2I3SGD8/7-39 DE LSM1 homolog, mRNA degradation associated #=GS A0A2I3SGD8/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; #=GS A0A2K6Q6Y2/7-39 AC A0A2K6Q6Y2 #=GS A0A2K6Q6Y2/7-39 OS Rhinopithecus roxellana #=GS A0A2K6Q6Y2/7-39 DE Uncharacterized protein #=GS A0A2K6Q6Y2/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus roxellana; #=GS A0A2K6BEC0/7-39 AC A0A2K6BEC0 #=GS A0A2K6BEC0/7-39 OS Macaca nemestrina #=GS A0A2K6BEC0/7-39 DE Uncharacterized protein #=GS A0A2K6BEC0/7-39 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca nemestrina; #=GS A0A2J8N7W0/7-40 AC A0A2J8N7W0 #=GS A0A2J8N7W0/7-40 OS Pan troglodytes #=GS A0A2J8N7W0/7-40 DE LSM1 isoform 5 #=GS A0A2J8N7W0/7-40 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; #=GS A0A2J8TPE7/7-40 AC A0A2J8TPE7 #=GS A0A2J8TPE7/7-40 OS Pongo abelii #=GS A0A2J8TPE7/7-40 DE LSM1 isoform 5 #=GS A0A2J8TPE7/7-40 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; #=GF SQ 24 E5RH18/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- E5RJ47/7-40 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFGT A0A337SJA0/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A3Q1LUP3/82-114 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFE- A0A2K6FVQ8/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2K5DGB1/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- F6Q0L1/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2K5SE89/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2I3H617/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2R8PAB8/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2J8TP81/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2K6K7B8/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2I3M0P0/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2R9ATT0/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2K5YYQ4/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2I2ZX52/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2K5HMT5/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2K5L0W9/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- Q4R369/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2I3SGD8/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2K6Q6Y2/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2K6BEC0/7-39 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFG- A0A2J8N7W0/7-40 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFGT A0A2J8TPE7/7-40 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFGT #=GC scorecons 9999999999999999999999999999999971 #=GC scorecons_70 *********************************_ #=GC scorecons_80 *********************************_ #=GC scorecons_90 ********************************__ //