# STOCKHOLM 1.0
#=GF ID 2.30.29.30/FF/000484
#=GF DE Transcription initiation factor TFIIH subunit
#=GF AC 2.30.29.30/FF/000484
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 34.356
#=GS 5urnA00/1-115     AC P32776
#=GS 5urnA00/1-115     OS Saccharomyces cerevisiae S288C
#=GS 5urnA00/1-115     DE General transcription and DNA repair factor IIH subunit TFB1
#=GS 5urnA00/1-115     DR CATH; 5urn; A:1-115; 
#=GS 5urnA00/1-115     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5urnA00/1-115     DR GO; GO:0000112; GO:0000439; GO:0005515; GO:0005634; GO:0005675; GO:0005829; GO:0006289; GO:0006360; GO:0006366; GO:0010314; GO:0032266; GO:0070816; 
#=GS 2n23A00/1-115     AC P32776
#=GS 2n23A00/1-115     OS Saccharomyces cerevisiae S288C
#=GS 2n23A00/1-115     DE General transcription and DNA repair factor IIH subunit TFB1
#=GS 2n23A00/1-115     DR CATH; 2n23; A:1-115; 
#=GS 2n23A00/1-115     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 2n23A00/1-115     DR GO; GO:0000112; GO:0000439; GO:0005515; GO:0005634; GO:0005675; GO:0005829; GO:0006289; GO:0006360; GO:0006366; GO:0010314; GO:0032266; GO:0070816; 
#=GS 2n0yA00/1-115     AC P32776
#=GS 2n0yA00/1-115     OS Saccharomyces cerevisiae S288C
#=GS 2n0yA00/1-115     DE General transcription and DNA repair factor IIH subunit TFB1
#=GS 2n0yA00/1-115     DR CATH; 2n0y; A:1-115; 
#=GS 2n0yA00/1-115     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 2n0yA00/1-115     DR GO; GO:0000112; GO:0000439; GO:0005515; GO:0005634; GO:0005675; GO:0005829; GO:0006289; GO:0006360; GO:0006366; GO:0010314; GO:0032266; GO:0070816; 
#=GS 2mkrA00/1-115     AC P32776
#=GS 2mkrA00/1-115     OS Saccharomyces cerevisiae S288C
#=GS 2mkrA00/1-115     DE General transcription and DNA repair factor IIH subunit TFB1
#=GS 2mkrA00/1-115     DR CATH; 2mkr; A:1-115; 
#=GS 2mkrA00/1-115     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 2mkrA00/1-115     DR GO; GO:0000112; GO:0000439; GO:0005515; GO:0005634; GO:0005675; GO:0005829; GO:0006289; GO:0006360; GO:0006366; GO:0010314; GO:0032266; GO:0070816; 
#=GS 2m14A00/1-119     AC P32776
#=GS 2m14A00/1-119     OS Saccharomyces cerevisiae S288C
#=GS 2m14A00/1-119     DE General transcription and DNA repair factor IIH subunit TFB1
#=GS 2m14A00/1-119     DR CATH; 2m14; A:1-115; 
#=GS 2m14A00/1-119     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 2m14A00/1-119     DR GO; GO:0000112; GO:0000439; GO:0005515; GO:0005634; GO:0005675; GO:0005829; GO:0006289; GO:0006360; GO:0006366; GO:0010314; GO:0032266; GO:0070816; 
#=GS 2loxA00/1-119     AC P32776
#=GS 2loxA00/1-119     OS Saccharomyces cerevisiae S288C
#=GS 2loxA00/1-119     DE General transcription and DNA repair factor IIH subunit TFB1
#=GS 2loxA00/1-119     DR CATH; 2lox; A:1-115; 
#=GS 2loxA00/1-119     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 2loxA00/1-119     DR GO; GO:0000112; GO:0000439; GO:0005515; GO:0005634; GO:0005675; GO:0005829; GO:0006289; GO:0006360; GO:0006366; GO:0010314; GO:0032266; GO:0070816; 
#=GS 2l2iA00/1-115     AC P32776
#=GS 2l2iA00/1-115     OS Saccharomyces cerevisiae S288C
#=GS 2l2iA00/1-115     DE General transcription and DNA repair factor IIH subunit TFB1
#=GS 2l2iA00/1-115     DR CATH; 2l2i; A:1-115; 
#=GS 2l2iA00/1-115     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 2l2iA00/1-115     DR GO; GO:0000112; GO:0000439; GO:0005515; GO:0005634; GO:0005675; GO:0005829; GO:0006289; GO:0006360; GO:0006366; GO:0010314; GO:0032266; GO:0070816; 
#=GS 2k2uA00/1-115     AC P32776
#=GS 2k2uA00/1-115     OS Saccharomyces cerevisiae S288C
#=GS 2k2uA00/1-115     DE General transcription and DNA repair factor IIH subunit TFB1
#=GS 2k2uA00/1-115     DR CATH; 2k2u; A:1-115; 
#=GS 2k2uA00/1-115     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 2k2uA00/1-115     DR GO; GO:0000112; GO:0000439; GO:0005515; GO:0005634; GO:0005675; GO:0005829; GO:0006289; GO:0006360; GO:0006366; GO:0010314; GO:0032266; GO:0070816; 
#=GS 2gs0A00/1-115     AC P32776
#=GS 2gs0A00/1-115     OS Saccharomyces cerevisiae S288C
#=GS 2gs0A00/1-115     DE General transcription and DNA repair factor IIH subunit TFB1
#=GS 2gs0A00/1-115     DR CATH; 2gs0; A:1-115; 
#=GS 2gs0A00/1-115     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 2gs0A00/1-115     DR GO; GO:0000112; GO:0000439; GO:0005515; GO:0005634; GO:0005675; GO:0005829; GO:0006289; GO:0006360; GO:0006366; GO:0010314; GO:0032266; GO:0070816; 
#=GS 1y5oA00/1-115     AC P32776
#=GS 1y5oA00/1-115     OS Saccharomyces cerevisiae S288C
#=GS 1y5oA00/1-115     DE General transcription and DNA repair factor IIH subunit TFB1
#=GS 1y5oA00/1-115     DR CATH; 1y5o; A:1-115; 
#=GS 1y5oA00/1-115     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 1y5oA00/1-115     DR GO; GO:0000112; GO:0000439; GO:0005515; GO:0005634; GO:0005675; GO:0005829; GO:0006289; GO:0006360; GO:0006366; GO:0010314; GO:0032266; GO:0070816; 
#=GS P32776/1-115      AC P32776
#=GS P32776/1-115      OS Saccharomyces cerevisiae S288C
#=GS P32776/1-115      DE General transcription and DNA repair factor IIH subunit TFB1
#=GS P32776/1-115      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P32776/1-115      DR GO; GO:0000112; GO:0000439; GO:0005515; GO:0005634; GO:0005675; GO:0005829; GO:0006289; GO:0006360; GO:0006366; GO:0010314; GO:0032266; GO:0070816; 
#=GS R9X7E2/1-115      AC R9X7E2
#=GS R9X7E2/1-115      OS Saccharomycetaceae sp. 'Ashbya aceri'
#=GS R9X7E2/1-115      DE AaceriAAL042Wp
#=GS R9X7E2/1-115      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; 
#=GS Q75EX0/1-115      AC Q75EX0
#=GS Q75EX0/1-115      OS Eremothecium gossypii ATCC 10895
#=GS Q75EX0/1-115      DE AAL042Wp
#=GS Q75EX0/1-115      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS H0GED9/1-115      AC H0GED9
#=GS H0GED9/1-115      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GED9/1-115      DE Tfb1p
#=GS H0GED9/1-115      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8VTG8/1-115  AC A0A0L8VTG8
#=GS A0A0L8VTG8/1-115  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VTG8/1-115  DE TFB1p Subunit of TFIIH and nucleotide excision repair factor 3 complexes
#=GS A0A0L8VTG8/1-115  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS A0A0L8RPS1/1-115  AC A0A0L8RPS1
#=GS A0A0L8RPS1/1-115  OS Saccharomyces eubayanus
#=GS A0A0L8RPS1/1-115  DE TFB1-like protein
#=GS A0A0L8RPS1/1-115  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS G2WB49/1-115      AC G2WB49
#=GS G2WB49/1-115      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WB49/1-115      DE K7_Tfb1p
#=GS G2WB49/1-115      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VGJ1/1-115      AC B5VGJ1
#=GS B5VGJ1/1-115      OS Saccharomyces cerevisiae AWRI1631
#=GS B5VGJ1/1-115      DE YDR311Wp-like protein
#=GS B5VGJ1/1-115      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GQW1/1-115      AC C7GQW1
#=GS C7GQW1/1-115      OS Saccharomyces cerevisiae JAY291
#=GS C7GQW1/1-115      DE Tfb1p
#=GS C7GQW1/1-115      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LFY5/1-115      AC B3LFY5
#=GS B3LFY5/1-115      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LFY5/1-115      DE RNA polymerase II transcription factor B subunit 1
#=GS B3LFY5/1-115      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GT49/1-115      AC H0GT49
#=GS H0GT49/1-115      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GT49/1-115      DE Tfb1p
#=GS H0GT49/1-115      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A6ZYQ9/1-115      AC A6ZYQ9
#=GS A6ZYQ9/1-115      OS Saccharomyces cerevisiae YJM789
#=GS A6ZYQ9/1-115      DE Transcription initiation factor TFIIH subunit
#=GS A6ZYQ9/1-115      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1P6V8/1-115      AC N1P6V8
#=GS N1P6V8/1-115      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P6V8/1-115      DE Tfb1p
#=GS N1P6V8/1-115      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8Z5M2/1-115      AC C8Z5M2
#=GS C8Z5M2/1-115      OS Saccharomyces cerevisiae EC1118
#=GS C8Z5M2/1-115      DE Tfb1p
#=GS C8Z5M2/1-115      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF SQ 24
5urnA00/1-115             PSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
2n23A00/1-115             PSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
2n0yA00/1-115             PSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
2mkrA00/1-115             PSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
2m14A00/1-119             PSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDADGNSS
2loxA00/1-119             PSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDADGNSS
2l2iA00/1-115             PSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
2k2uA00/1-115             PSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
2gs0A00/1-115             PSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
1y5oA00/1-115             PSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
P32776/1-115              MSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
R9X7E2/1-115              MSHSGAAVFKKVSGMLMIDEESNPAVLTWRSTDGDKSHSVMLNTINKLQATPASSDKMMLRLVGKVSTAKRLKDEDGAEAEPKPVVHMFSFNNRIVMDNIKETLQHIISRYKDEE----
Q75EX0/1-115              MSHSGAAVFKKVSGMLLIDEESNPAILTWRSTDGDKSHSVMLNTINKLQATPASSDKMMLRLVGKVSTAKRLKDEDGGEAEPKPVVHMFTFNNRIVMDNIKETLQHIISRYKDEE----
H0GED9/1-115              MSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
A0A0L8VTG8/1-115          MSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
A0A0L8RPS1/1-115          MSHSGAAIFKKVSGIIAINEDVSPAELTWRSTDGDKIHTVPLSTIDKLQATPTSSEKMMLRLIGKVDESKKQKDNEGNEVLPKPQSHMFSFNNRTVMDNIKMTLQQIISRYKDTD----
G2WB49/1-115              MSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
B5VGJ1/1-115              MSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
C7GQW1/1-115              MSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
B3LFY5/1-115              MSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
H0GT49/1-115              MSHSGAAIFDKVSGIIAINEDASPAELIWRSTDGDKVHTVVLSTIDKLQATPVSSEKMMLRLIGKVDESKKQKDNEGNEVLPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
A6ZYQ9/1-115              MSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
N1P6V8/1-115              MSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
C8Z5M2/1-115              MSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDAD----
#=GC scorecons            59999997959999665969756995989999999959696969969999997997999999799965697499679596499954999799996999999599969999999570000
#=GC scorecons_70         _********_******_****_***_**********_***_*************************__***_*****_**_***__***************_***********_*____
#=GC scorecons_80         _********_****___*_**__**_**********_*_*_*_**_********************___**_**_**_*__***__********_******_***_*******_*____
#=GC scorecons_90         _******_*_****___*_*___**_**********_*_*_*_**_******_**_******_***___*__**__*_*__***__***_****_******_***_*******______
//