# STOCKHOLM 1.0 #=GF ID 2.30.18.10/FF/000008 #=GF DE Transcription factor TFIIA complex large subunit #=GF AC 2.30.18.10/FF/000008 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 95.326 #=GS Q9USU9/305-369 AC Q9USU9 #=GS Q9USU9/305-369 OS Schizosaccharomyces pombe 972h- #=GS Q9USU9/305-369 DE Transcription initiation factor IIA large subunit #=GS Q9USU9/305-369 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; #=GS Q9USU9/305-369 DR GO; GO:0005634; GO:0005672; GO:0005829; GO:0006367; GO:0016251; #=GS Q54G80/250-309 AC Q54G80 #=GS Q54G80/250-309 OS Dictyostelium discoideum #=GS Q54G80/250-309 DE Transcription initiation factor IIA subunit 1 #=GS Q54G80/250-309 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; #=GS Q54G80/250-309 DR GO; GO:0005672; GO:0006367; #=GS O44625/290-354 AC O44625 #=GS O44625/290-354 OS Caenorhabditis elegans #=GS O44625/290-354 DE Prion-like-(Q/N-rich)-domain-bearing protein #=GS O44625/290-354 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS B3SC95/138-199 AC B3SC95 #=GS B3SC95/138-199 OS Trichoplax adhaerens #=GS B3SC95/138-199 DE Uncharacterized protein #=GS B3SC95/138-199 DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; #=GS T1FMR7/249-311 AC T1FMR7 #=GS T1FMR7/249-311 OS Helobdella robusta #=GS T1FMR7/249-311 DE Uncharacterized protein #=GS T1FMR7/249-311 DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; #=GS A9UTS8/91-158 AC A9UTS8 #=GS A9UTS8/91-158 OS Monosiga brevicollis #=GS A9UTS8/91-158 DE Predicted protein #=GS A9UTS8/91-158 DR ORG; Eukaryota; Choanoflagellida; Salpingoecidae; Monosiga; Monosiga brevicollis; #=GS F6WII1/274-332 AC F6WII1 #=GS F6WII1/274-332 OS Ciona intestinalis #=GS F6WII1/274-332 DE TFIIA-alpha and beta-like factor isoform X1 #=GS F6WII1/274-332 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GS F4NV95/216-275 AC F4NV95 #=GS F4NV95/216-275 OS Batrachochytrium dendrobatidis JAM81 #=GS F4NV95/216-275 DE Uncharacterized protein #=GS F4NV95/216-275 DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; #=GS F0ZSA7/249-308 AC F0ZSA7 #=GS F0ZSA7/249-308 OS Dictyostelium purpureum #=GS F0ZSA7/249-308 DE Uncharacterized protein gtf2a1 #=GS F0ZSA7/249-308 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; #=GS A0A369S6U5/177-238 AC A0A369S6U5 #=GS A0A369S6U5/177-238 OS Trichoplax sp. H2 #=GS A0A369S6U5/177-238 DE Transcription initiation factor IIA subunit 1 #=GS A0A369S6U5/177-238 DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax sp. H2; #=GS H3ET76/369-433 AC H3ET76 #=GS H3ET76/369-433 OS Pristionchus pacificus #=GS H3ET76/369-433 DE Uncharacterized protein #=GS H3ET76/369-433 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A0A1S8W8T3/219-279 AC A0A1S8W8T3 #=GS A0A1S8W8T3/219-279 OS Batrachochytrium salamandrivorans #=GS A0A1S8W8T3/219-279 DE Uncharacterized protein #=GS A0A1S8W8T3/219-279 DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium salamandrivorans; #=GS B6JYP5/380-444 AC B6JYP5 #=GS B6JYP5/380-444 OS Schizosaccharomyces japonicus yFS275 #=GS B6JYP5/380-444 DE Transcription factor TFIIA complex large subunit #=GS B6JYP5/380-444 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces japonicus; #=GS S9VSQ7/307-371 AC S9VSQ7 #=GS S9VSQ7/307-371 OS Schizosaccharomyces cryophilus OY26 #=GS S9VSQ7/307-371 DE Transcription factor TFIIA complex large subunit #=GS S9VSQ7/307-371 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces cryophilus; #=GS S9PXP4/331-395 AC S9PXP4 #=GS S9PXP4/331-395 OS Schizosaccharomyces octosporus yFS286 #=GS S9PXP4/331-395 DE Transcription factor TFIIA complex large subunit #=GS S9PXP4/331-395 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces octosporus; #=GS A0A261BML1/294-358 AC A0A261BML1 #=GS A0A261BML1/294-358 OS Caenorhabditis latens #=GS A0A261BML1/294-358 DE Uncharacterized protein #=GS A0A261BML1/294-358 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; #=GS E3LP02/293-357 AC E3LP02 #=GS E3LP02/293-357 OS Caenorhabditis remanei #=GS E3LP02/293-357 DE CRE-PQN-51 protein #=GS E3LP02/293-357 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS A0A2G5TFA3/268-332 AC A0A2G5TFA3 #=GS A0A2G5TFA3/268-332 OS Caenorhabditis nigoni #=GS A0A2G5TFA3/268-332 DE Uncharacterized protein #=GS A0A2G5TFA3/268-332 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS G0MS72/289-353 AC G0MS72 #=GS G0MS72/289-353 OS Caenorhabditis brenneri #=GS G0MS72/289-353 DE CBN-PQN-51 protein #=GS G0MS72/289-353 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS A8X6V8/289-353 AC A8X6V8 #=GS A8X6V8/289-353 OS Caenorhabditis briggsae #=GS A8X6V8/289-353 DE Protein CBR-PQN-51 #=GS A8X6V8/289-353 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A0A1W2WPJ4/252-310 AC A0A1W2WPJ4 #=GS A0A1W2WPJ4/252-310 OS Ciona intestinalis #=GS A0A1W2WPJ4/252-310 DE TFIIA-alpha and beta-like factor isoform X4 #=GS A0A1W2WPJ4/252-310 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GF SQ 21 Q9USU9/305-369 --------LDDPDSDEAPETEEGSDIGQAIVLCLYDKVNHHKNKWKCVFRDGVVGVNGKDYLFFKANGEFEWI Q54G80/250-309 ------SDLDDDDDDDP------DPIIEHFVLCQYEKVSRIKNKRKCNFKDGIMHLNGKDTLFNKANGEMIW- O44625/290-354 PL---NSEDDQSDDEDL----TMLFEADNVVMCQFEKVNRARTKWKFQLKDGIMHIDKKDYCFQKCTGEAEW- B3SC95/138-199 -----NT-DDDASDEDD----IDSFECDNVIVCQYDKVTRARSKWKLHLKDGIMNIGGNDYVFNKASGDCDW- T1FMR7/249-311 -----NSGDDDPNEDDT----QDLFDVDNVVVCQFDKINRSKAKWKFHLKDGIMNLKGKDFVFQKAVGEAEF- A9UTS8/91-158 AAENEDEDDDDDDDDDE----EGSFHTANSLLCFYDRVSKTKGAYKCALRNAVLTVDRKSYVFSKIQAELKW- F6WII1/274-332 ---------DDGSDDDP----VELFDTDNVVVCQYDKIHRAKCRWKFNLKVGIMNLNGKDLVFQKATGEAEW- F4NV95/216-275 ------SELDDDDSEDE------YAEVDHLVLCQFEKVQRVKNKWKCVLKDGVVNVNGKDYLFNKANCDFEW- F0ZSA7/249-308 ------SDLDDEEDDDP------DPVIEHYVLCQYEKVTRIKNKRKCIFKDGIMHLNGKDSLFHKANGEVVW- A0A369S6U5/177-238 -----NT-DDDASDEDD----IDSFECDNVIVCQYDKVTRARSKWKLHLKDGIMNIGGNDYVFNKASGDCDW- H3ET76/369-433 PL---NSDDDQSDDEDL----VTLFDAEDVVMCQFEKVSRARSKWKFSLKDGIMHINGKDFCFQKCTGEAEW- A0A1S8W8T3/219-279 -----DSELDDDDSEDE------YAEVDHLVLCQFEKVQRVKNKWKCVLKDGVVNVNGKDYLFNKANCDFEW- B6JYP5/380-444 --------LDDPDSDDAPETEEGSDIGQAIVLCLYDKVNRNKNKWKCVLKDGIVGVNGKDYLFFKANGEFEWI S9VSQ7/307-371 --------LDDPDSEEAPEAEEGSDIGQAIVLCLYDKVNHHKNKWKCVFRDGIVGVNGKDYLFFKANGEFEWI S9PXP4/331-395 --------LDDPDSDEAPEADEGSDVGQAIVLCLYDKVNHHKNKWKCVFRDGIVGVNGKDYLFFKANGEFEWI A0A261BML1/294-358 PL---NSEDDQSDDEDL----TMLFDADNVVMCQFEKVNRARTKWKFQLKDGIMHIDKKDYCFQKCTGEAEW- E3LP02/293-357 PL---NSEDDQSDDEDL----TMLFDAENVVMCQFEKVNRARTKWKFQLKDGIMHIDKKDYCFQKCTGEAEW- A0A2G5TFA3/268-332 PL---NSEDDQSDDEDL----TMLFDADNVVMCQFEKVNRARTKWKFQLKDGIMHIDKKDYCFQKCTGEAEW- G0MS72/289-353 PL---NSEDDQSDDEDL----TQLFDADNIVMCQFEKVNRARTKWKFQLKDGIMHIDKKDYCFQKCTGEAEW- A8X6V8/289-353 PL---NSEDDQSDDEDL----TMLFDADNVVMCQFEKVNRARTKWKFQLKDGIMHIDKKDYCFQKCTGEAEW- A0A1W2WPJ4/252-310 ---------DDGSDDDP----VELFDTDNVVVCQYDKIHRAKCRWKFNLKVGIMNLNGKDLVFQKATGEAEW- #=GC scorecons 0000023239646677300002244435557595778847474779537778764655886493954773680 #=GC scorecons_70 _________**_*_**______________*_*_****_*_*_***__******____**__*_*__**_**_ #=GC scorecons_80 _________*_____*______________*_*_*_**_*_*_*_*___*_**_____**__*_*___*__*_ #=GC scorecons_90 _________*______________________*___*________*_____*_______*__*_*______*_ //