# STOCKHOLM 1.0
#=GF ID 2.30.130.10/FF/000017
#=GF DE RNA-binding protein, containing PUA domain
#=GF AC 2.30.130.10/FF/000017
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 86.712
#=GS Q97TZ1/69-150      AC Q97TZ1
#=GS Q97TZ1/69-150      OS Saccharolobus solfataricus P2
#=GS Q97TZ1/69-150      DE Uncharacterized protein
#=GS Q97TZ1/69-150      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus; Saccharolobus solfataricus; 
#=GS A9A4A2/69-145      AC A9A4A2
#=GS A9A4A2/69-145      OS Nitrosopumilus maritimus SCM1
#=GS A9A4A2/69-145      DE PUA domain containing protein
#=GS A9A4A2/69-145      DR ORG; Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus; Nitrosopumilus maritimus; 
#=GS Q8ZWT7/78-155      AC Q8ZWT7
#=GS Q8ZWT7/78-155      OS Pyrobaculum aerophilum str. IM2
#=GS Q8ZWT7/78-155      DE Conserved protein with predicted RNA binding PUA domain
#=GS Q8ZWT7/78-155      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum; Pyrobaculum aerophilum; 
#=GS B1L7K7/85-159      AC B1L7K7
#=GS B1L7K7/85-159      OS Candidatus Korarchaeum cryptofilum OPF8
#=GS B1L7K7/85-159      DE PUA domain containing protein
#=GS B1L7K7/85-159      DR ORG; Archaea; Candidatus Korarchaeota; Candidatus Korarchaeum; Candidatus Korarchaeum cryptofilum; 
#=GS Q5JHT3/79-171      AC Q5JHT3
#=GS Q5JHT3/79-171      OS Thermococcus kodakarensis KOD1
#=GS Q5JHT3/79-171      DE RNA-binding protein, containing PUA domain
#=GS Q5JHT3/79-171      DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus kodakarensis; 
#=GS A0A087S1Z7/69-145  AC A0A087S1Z7
#=GS A0A087S1Z7/69-145  OS Marine Group I thaumarchaeote SCGC AAA799-P11
#=GS A0A087S1Z7/69-145  DE Putative tRNA pseudouridine synthase B protein
#=GS A0A087S1Z7/69-145  DR ORG; Archaea; Thaumarchaeota; Marine Group I thaumarchaeote SCGC AAA799-P11; 
#=GS A0A0C5BSJ6/69-145  AC A0A0C5BSJ6
#=GS A0A0C5BSJ6/69-145  OS Candidatus Nitrosopumilus piranensis
#=GS A0A0C5BSJ6/69-145  DE PUA domain containing protein
#=GS A0A0C5BSJ6/69-145  DR ORG; Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus; Candidatus Nitrosopumilus piranensis; 
#=GS A0A0E3K094/69-150  AC A0A0E3K094
#=GS A0A0E3K094/69-150  OS Saccharolobus solfataricus
#=GS A0A0E3K094/69-150  DE DUF1947 domain-containing protein
#=GS A0A0E3K094/69-150  DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus; Saccharolobus solfataricus; 
#=GS D0KR48/69-150      AC D0KR48
#=GS D0KR48/69-150      OS Saccharolobus solfataricus 98/2
#=GS D0KR48/69-150      DE Uncharacterized protein
#=GS D0KR48/69-150      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus; Saccharolobus solfataricus; 
#=GS A0A429G5C6/85-159  AC A0A429G5C6
#=GS A0A429G5C6/85-159  OS Candidatus Korarchaeum cryptofilum
#=GS A0A429G5C6/85-159  DE Uncharacterized protein
#=GS A0A429G5C6/85-159  DR ORG; Archaea; Candidatus Korarchaeota; Candidatus Korarchaeum; Candidatus Korarchaeum cryptofilum; 
#=GF SQ 10
Q97TZ1/69-150              --------P-YVIIDEGAVKAVSKGADLFAPGIVEYNCECKENEIV-LAKTKTNLPVAVLRVLMPKEKALVEKKGKFALNLHHIGDKIWEMC-
A9A4A2/69-145              -----EKFP-SVTVDMGAVKFMCKGANLMRPGIRSFT-EFEKDKLVCIVEESQHKFLAVGKSVVSSEEVEKMDKGEVLKNLHYI---------
Q8ZWT7/78-155              ----LPSFP-KAVVDAGAVKRIINGADVMRPGIKKLEGDFNKGSIVFVADEK-GRTIAIAASLYSKGEIEQMEKGKVLLNLHYL---------
B1L7K7/85-159              ------PIP-RVVVDLGAVKPIASGADVMGPGIKDVEGKFNPGDIVAVVDEKIKAVIALGIAQRSSDEAK--ERGKTIKNIHHA---------
Q5JHT3/79-171              NEEDLRKWPRRVVVDEGAVPYILNGADVMAAGIVDADENINEGDFVFVVEENYGRPLAIGIALMDGRKMKEKPKGKAVKNIHHAKDKIWQVTV
A0A087S1Z7/69-145          -----EKFP-SITVDMGAVKFMCKGANLMRPGIRSFT-EFEKNKLVCIVEESQHKFLAVGKSVVSSDEAEKMDKGEVVKNLHYI---------
A0A0C5BSJ6/69-145          -----ERFP-NVTVDMGAVKFMCKGANLMRPGIKSFT-EFEKDKLVCIVEESQHKVLAVGKSVVSSSELEKMDKGEVLKNLHYI---------
A0A0E3K094/69-150          --------P-YVIIDEGAVKAVSKGADLFAPGIVEYNCECKENEIV-LAKTKTNLPVAVLRVLMPKEKALVEKKGKFALNLHHIGDKIWEMC-
D0KR48/69-150              --------P-YVIIDEGAVKAVSKGADLFAPGIVEYNCECKENEIV-LAKTKTNLPVAVLRVLMPKEKALVEKKGKFALNLHHIGDKIWEMC-
A0A429G5C6/85-159          ------PIP-RVVVDLGAVKPIASGADVMGPGIKDVEGKFNPGDIVAVVDEKIKAVIALGIAQRSSDEAK--ERGKTIKNIHHA---------
#=GC scorecons             000000129037579399973635996664799444425554545915655524345964344354465322479644496975011110000
#=GC scorecons_70          ________*__*_**_****____****__***____________*___________*_______________***___****__________
#=GC scorecons_80          ________*__*_**_****____**____***____________*___________*_______________**____*_*___________
#=GC scorecons_90          ________*_____*_***_____**_____**____________*___________*________________*____*_*___________
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