# STOCKHOLM 1.0
#=GF ID 2.20.70.10/FF/000112
#=GF DE Yorkie, isoform G
#=GF AC 2.20.70.10/FF/000112
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 59.067
#=GS Q45VV3/304-345      AC Q45VV3
#=GS Q45VV3/304-345      OS Drosophila melanogaster
#=GS Q45VV3/304-345      DE Transcriptional coactivator yorkie
#=GS Q45VV3/304-345      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q45VV3/304-345      DR GO; GO:0001708; GO:0002011; GO:0003007; GO:0003713; GO:0005515; GO:0005634; GO:0005654; GO:0005737; GO:0005829; GO:0007298; GO:0008134; GO:0008283; GO:0019900; GO:0035212; GO:0035329; GO:0040008; GO:0043066; GO:0045572; GO:0045927; GO:0045944; GO:0051571; GO:0051726; GO:0060252; GO:0071889; GO:0072089; GO:0090210; GO:0097575; GO:0120081; GO:1905437; 
#=GS A0A0C4DHD4/304-345  AC A0A0C4DHD4
#=GS A0A0C4DHD4/304-345  OS Drosophila melanogaster
#=GS A0A0C4DHD4/304-345  DE Yorkie, isoform G
#=GS A0A0C4DHD4/304-345  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS H0RNA4/327-368      AC H0RNA4
#=GS H0RNA4/327-368      OS Drosophila melanogaster
#=GS H0RNA4/327-368      DE FI16856p1
#=GS H0RNA4/327-368      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS B3RLX5/202-246      AC B3RLX5
#=GS B3RLX5/202-246      OS Trichoplax adhaerens
#=GS B3RLX5/202-246      DE Predicted protein
#=GS B3RLX5/202-246      DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; 
#=GS A7SLN5/157-198      AC A7SLN5
#=GS A7SLN5/157-198      OS Nematostella vectensis
#=GS A7SLN5/157-198      DE Predicted protein
#=GS A7SLN5/157-198      DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; 
#=GS A0A369SJ87/175-219  AC A0A369SJ87
#=GS A0A369SJ87/175-219  OS Trichoplax sp. H2
#=GS A0A369SJ87/175-219  DE Transcriptional coactivator YAP1
#=GS A0A369SJ87/175-219  DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax sp. H2; 
#=GS B4I2C6/300-341      AC B4I2C6
#=GS B4I2C6/300-341      OS Drosophila sechellia
#=GS B4I2C6/300-341      DE GM18275
#=GS B4I2C6/300-341      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B3MDX2/326-367      AC B3MDX2
#=GS B3MDX2/326-367      OS Drosophila ananassae
#=GS B3MDX2/326-367      DE Uncharacterized protein
#=GS B3MDX2/326-367      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS A0A1W4UMV6/301-342  AC A0A1W4UMV6
#=GS A0A1W4UMV6/301-342  OS Drosophila ficusphila
#=GS A0A1W4UMV6/301-342  DE transcriptional coactivator yorkie isoform X1
#=GS A0A1W4UMV6/301-342  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A0J9RJQ3/327-368  AC A0A0J9RJQ3
#=GS A0A0J9RJQ3/327-368  OS Drosophila simulans
#=GS A0A0J9RJQ3/327-368  DE Uncharacterized protein, isoform B
#=GS A0A0J9RJQ3/327-368  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B3NQ71/327-368      AC B3NQ71
#=GS B3NQ71/327-368      OS Drosophila erecta
#=GS B3NQ71/327-368      DE Uncharacterized protein, isoform A
#=GS B3NQ71/327-368      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS A0A0R3NMX5/282-323  AC A0A0R3NMX5
#=GS A0A0R3NMX5/282-323  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NMX5/282-323  DE Uncharacterized protein, isoform C
#=GS A0A0R3NMX5/282-323  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A3B0JPZ1/278-319  AC A0A3B0JPZ1
#=GS A0A3B0JPZ1/278-319  OS Drosophila guanche
#=GS A0A3B0JPZ1/278-319  DE Blast:Protein yorkie
#=GS A0A3B0JPZ1/278-319  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS B4PAT4/327-368      AC B4PAT4
#=GS B4PAT4/327-368      OS Drosophila yakuba
#=GS B4PAT4/327-368      DE Uncharacterized protein, isoform A
#=GS B4PAT4/327-368      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 14
Q45VV3/304-345              --TIANNLGPLPDGWEQAVTESGDLYFINHIDRTTSWNDPR---MQS
A0A0C4DHD4/304-345          --TIANNLGPLPDGWEQAVTESGDLYFINHIDRTTSWNDPR---MQS
H0RNA4/327-368              --TIANNLGPLPDGWEQAVTESGDLYFINHIDRTTSWNDPR---MQS
B3RLX5/202-246              --NNGPMQAKLPDGWEKAFTPEGQVYFVNHITRTTSWNDPRRSMMQA
A7SLN5/157-198              STSNLNNSNSLPDGWEQAITPEGEVYFINHITRTTSWIDPR-----N
A0A369SJ87/175-219          --NNGPMQAKLPDGWEKAFTPEGQVYFVNHITRTTSWNDPRRSMMQA
B4I2C6/300-341              --TIANNLGPLPDGWEQAVTESGDLYFINHIDRTTSWNDPR---MQS
B3MDX2/326-367              --AIANNLGPLPDGWEQAVTETGDIYFINHIDRTTSWNDPR---MQS
A0A1W4UMV6/301-342          --TIANNLGPLPDGWEQAVTESGDLYFINHIDRTTSWNDPR---MQS
A0A0J9RJQ3/327-368          --TIANNLGPLPDGWEQAVTESGDLYFINHIDRTTSWNDPR---MQS
B3NQ71/327-368              --TIANNLGPLPDGWEQAVTESGDLYFINHIDRTTSWNDPR---MQS
A0A0R3NMX5/282-323          --TIANSLGPLPDGWEQAVTDSGDIYFINHIDRTTSWIDPR---MQS
A0A3B0JPZ1/278-319          --TIANSLGPLPDGWEQAVTESGDIYFINHIDRTTSWIDPR---MQS
B4PAT4/327-368              --TIANNLGPLPDGWEQAVTESGDLYFINHIDRTTSWNDPR---MQS
#=GC scorecons              00554544549999996959459559979995999995999000665
#=GC scorecons_70           __________********_*__*__******_*****_***___**_
#=GC scorecons_80           __________******_*_*__*__******_*****_***______
#=GC scorecons_90           __________******_*_*__*__**_***_*****_***______
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