# STOCKHOLM 1.0
#=GF ID 2.20.70.10/FF/000102
#=GF DE Pre-mRNA-processing factor 40 homolog B
#=GF AC 2.20.70.10/FF/000102
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 84.363
#=GS P34600/125-170      AC P34600
#=GS P34600/125-170      OS Caenorhabditis elegans
#=GS P34600/125-170      DE WW domain-containing protein ZK1098.1
#=GS P34600/125-170      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS P34600/125-170      DR GO; GO:0005634; 
#=GS Q6NWY9/136-180      AC Q6NWY9
#=GS Q6NWY9/136-180      OS Homo sapiens
#=GS Q6NWY9/136-180      DE Pre-mRNA-processing factor 40 homolog B
#=GS Q6NWY9/136-180      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS F6R4T5/131-166      AC F6R4T5
#=GS F6R4T5/131-166      OS Ciona intestinalis
#=GS F6R4T5/131-166      DE Uncharacterized protein
#=GS F6R4T5/131-166      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS C3YZT8/79-125       AC C3YZT8
#=GS C3YZT8/79-125       OS Branchiostoma floridae
#=GS C3YZT8/79-125       DE Uncharacterized protein
#=GS C3YZT8/79-125       DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS F7ESA8/122-164      AC F7ESA8
#=GS F7ESA8/122-164      OS Xenopus tropicalis
#=GS F7ESA8/122-164      DE Pre-mRNA-processing factor 40 homolog B
#=GS F7ESA8/122-164      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS A8XAA7/133-169      AC A8XAA7
#=GS A8XAA7/133-169      OS Caenorhabditis briggsae
#=GS A8XAA7/133-169      DE Protein CBG10063
#=GS A8XAA7/133-169      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS G7N6X2/136-180      AC G7N6X2
#=GS G7N6X2/136-180      OS Macaca mulatta
#=GS G7N6X2/136-180      DE Huntingtin-interacting protein C
#=GS G7N6X2/136-180      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS A0A2K5IPR4/136-182  AC A0A2K5IPR4
#=GS A0A2K5IPR4/136-182  OS Colobus angolensis palliatus
#=GS A0A2K5IPR4/136-182  DE Uncharacterized protein
#=GS A0A2K5IPR4/136-182  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus; Colobus angolensis; Colobus angolensis palliatus; 
#=GS A0A2R9A4X3/136-180  AC A0A2R9A4X3
#=GS A0A2R9A4X3/136-180  OS Pan paniscus
#=GS A0A2R9A4X3/136-180  DE Uncharacterized protein
#=GS A0A2R9A4X3/136-180  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; 
#=GS A0A2K5LVX8/136-180  AC A0A2K5LVX8
#=GS A0A2K5LVX8/136-180  OS Cercocebus atys
#=GS A0A2K5LVX8/136-180  DE Uncharacterized protein
#=GS A0A2K5LVX8/136-180  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; 
#=GS A0A2K6KKS9/115-156  AC A0A2K6KKS9
#=GS A0A2K6KKS9/115-156  OS Rhinopithecus bieti
#=GS A0A2K6KKS9/115-156  DE Uncharacterized protein
#=GS A0A2K6KKS9/115-156  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus bieti; 
#=GS H2R7D5/136-180      AC H2R7D5
#=GS H2R7D5/136-180      OS Pan troglodytes
#=GS H2R7D5/136-180      DE Uncharacterized protein
#=GS H2R7D5/136-180      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS G7PHT2/136-180      AC G7PHT2
#=GS G7PHT2/136-180      OS Macaca fascicularis
#=GS G7PHT2/136-180      DE Huntingtin-interacting protein C
#=GS G7PHT2/136-180      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS A0A2K6C5N7/114-156  AC A0A2K6C5N7
#=GS A0A2K6C5N7/114-156  OS Macaca nemestrina
#=GS A0A2K6C5N7/114-156  DE Uncharacterized protein
#=GS A0A2K6C5N7/114-156  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca nemestrina; 
#=GS F7A3U9/156-196      AC F7A3U9
#=GS F7A3U9/156-196      OS Macaca mulatta
#=GS F7A3U9/156-196      DE Uncharacterized protein
#=GS F7A3U9/156-196      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS A0A2K5LW13/114-156  AC A0A2K5LW13
#=GS A0A2K5LW13/114-156  OS Cercocebus atys
#=GS A0A2K5LW13/114-156  DE Uncharacterized protein
#=GS A0A2K5LW13/114-156  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; 
#=GS A0A2K5VA49/114-156  AC A0A2K5VA49
#=GS A0A2K5VA49/114-156  OS Macaca fascicularis
#=GS A0A2K5VA49/114-156  DE Uncharacterized protein
#=GS A0A2K5VA49/114-156  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GF SQ 17
P34600/125-170              -QQGQWKEFMSDDGKPYYYNTLTKKTQWVKPDGEEITKGEQKPAAKA--
Q6NWY9/136-180              --QCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEVLVKQEAAG--
F6R4T5/131-166              --KCAWKEFTADSGKSYYYNSETKSSVWTIPKELQDLK-----------
C3YZT8/79-125               -DSCPWKEFKADSGKVYYYNSQTKESRWTIPKELEELRAMIAAQGLDK-
F7ESA8/122-164              LSQCPWKEYKSDTGKSYYYNSQTKESRWTKPKDLDELEGKGAR------
A8XAA7/133-169              -QQSVWKEFEA-DGKPYYYNTITKKTQWVKPEGEIITSK----------
G7N6X2/136-180              --QCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEVLVKQEAAG--
A0A2K5IPR4/136-182          --QCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEVLVKQEAAGKQ
A0A2R9A4X3/136-180          --QCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEVLVKQEAAG--
A0A2K5LVX8/136-180          --QCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEVLVKQEAAG--
A0A2K6KKS9/115-156          LSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEGEMS-------
H2R7D5/136-180              --QCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEVLVKQEAAG--
G7PHT2/136-180              --QCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEVLVKQEAAG--
A0A2K6C5N7/114-156          LSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEGETSY------
F7A3U9/156-196              --QCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEGETSY------
A0A2K5LW13/114-156          LSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEGETSY------
A0A2K5VA49/114-156          LSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEGETSY------
#=GC scorecons              0176599975675996999955696769659665556532222111100
#=GC scorecons_70           __**_****_**_*******___*_*_**_**____*____________
#=GC scorecons_80           _____****____**_****___*___*__*__________________
#=GC scorecons_90           _____***_____**_****___*___*__*__________________
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