# STOCKHOLM 1.0
#=GF ID 2.20.25.240/FF/000002
#=GF DE FLYWCH zinc finger transcription factor homolog
#=GF AC 2.20.25.240/FF/000002
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 86.511
#=GS Q18225/135-213      AC Q18225
#=GS Q18225/135-213      OS Caenorhabditis elegans
#=GS Q18225/135-213      DE FLYWCH zinc finger transcription factor homolog
#=GS Q18225/135-213      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q18225/135-213      DR GO; GO:0002119; GO:0005634; GO:0043565; GO:0045892; 
#=GS D3NQA3/128-195      AC D3NQA3
#=GS D3NQA3/128-195      OS Caenorhabditis elegans
#=GS D3NQA3/128-195      DE FLYWCH zinc finger transcription factor homolog
#=GS D3NQA3/128-195      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS D3NQA3/128-195      DR GO; GO:0002119; GO:0003700; GO:0043565; GO:0045892; 
#=GS Q9XWQ6/135-203      AC Q9XWQ6
#=GS Q9XWQ6/135-203      OS Caenorhabditis elegans
#=GS Q9XWQ6/135-203      DE FLYWCH zinc finger transcription factor homolog
#=GS Q9XWQ6/135-203      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q9XWQ6/135-203      DR GO; GO:0045892; 
#=GS A7DTF1/134-201      AC A7DTF1
#=GS A7DTF1/134-201      OS Caenorhabditis elegans
#=GS A7DTF1/134-201      DE FLYWCH zinc finger transcription factor homolog
#=GS A7DTF1/134-201      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A7DTF1/134-201      DR GO; GO:0002119; GO:0003700; GO:0043565; GO:0045892; 
#=GS Q9XWR1/134-201      AC Q9XWR1
#=GS Q9XWR1/134-201      OS Caenorhabditis elegans
#=GS Q9XWR1/134-201      DE FLYWCH zinc finger transcription factor homolog
#=GS Q9XWR1/134-201      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q9XWR1/134-201      DR GO; GO:0002119; GO:0003700; GO:0043565; GO:0045892; 
#=GS H3EKM6/41-121       AC H3EKM6
#=GS H3EKM6/41-121       OS Pristionchus pacificus
#=GS H3EKM6/41-121       DE Uncharacterized protein
#=GS H3EKM6/41-121       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS G0MEL8/136-214      AC G0MEL8
#=GS G0MEL8/136-214      OS Caenorhabditis brenneri
#=GS G0MEL8/136-214      DE CBN-FLH-2 protein
#=GS G0MEL8/136-214      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS A8XS52/152-221      AC A8XS52
#=GS A8XS52/152-221      OS Caenorhabditis briggsae
#=GS A8XS52/152-221      DE Protein CBG18201
#=GS A8XS52/152-221      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5SC03/153-222  AC A0A2G5SC03
#=GS A0A2G5SC03/153-222  OS Caenorhabditis nigoni
#=GS A0A2G5SC03/153-222  DE Uncharacterized protein
#=GS A0A2G5SC03/153-222  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS E3MCL0/176-245      AC E3MCL0
#=GS E3MCL0/176-245      OS Caenorhabditis remanei
#=GS E3MCL0/176-245      DE CRE-FLH-2 protein
#=GS E3MCL0/176-245      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A261ATT8/158-229  AC A0A261ATT8
#=GS A0A261ATT8/158-229  OS Caenorhabditis latens
#=GS A0A261ATT8/158-229  DE Uncharacterized protein
#=GS A0A261ATT8/158-229  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A2H2IMD9/155-225  AC A0A2H2IMD9
#=GS A0A2H2IMD9/155-225  OS Caenorhabditis japonica
#=GS A0A2H2IMD9/155-225  DE Uncharacterized protein
#=GS A0A2H2IMD9/155-225  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS A0A2G5SBL3/157-226  AC A0A2G5SBL3
#=GS A0A2G5SBL3/157-226  OS Caenorhabditis nigoni
#=GS A0A2G5SBL3/157-226  DE Uncharacterized protein
#=GS A0A2G5SBL3/157-226  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A2G5SC14/167-236  AC A0A2G5SC14
#=GS A0A2G5SC14/167-236  OS Caenorhabditis nigoni
#=GS A0A2G5SC14/167-236  DE Uncharacterized protein
#=GS A0A2G5SC14/167-236  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8XLB0/71-140       AC A8XLB0
#=GS A8XLB0/71-140       OS Caenorhabditis briggsae
#=GS A8XLB0/71-140       DE Protein CBG15060
#=GS A8XLB0/71-140       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5TZQ6/151-219  AC A0A2G5TZQ6
#=GS A0A2G5TZQ6/151-219  OS Caenorhabditis nigoni
#=GS A0A2G5TZQ6/151-219  DE Uncharacterized protein
#=GS A0A2G5TZQ6/151-219  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A2G5U070/469-537  AC A0A2G5U070
#=GS A0A2G5U070/469-537  OS Caenorhabditis nigoni
#=GS A0A2G5U070/469-537  DE Uncharacterized protein
#=GS A0A2G5U070/469-537  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8XLA6/135-215      AC A8XLA6
#=GS A8XLA6/135-215      OS Caenorhabditis briggsae
#=GS A8XLA6/135-215      DE Protein CBG15055
#=GS A8XLA6/135-215      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5TZN6/135-214  AC A0A2G5TZN6
#=GS A0A2G5TZN6/135-214  OS Caenorhabditis nigoni
#=GS A0A2G5TZN6/135-214  DE Uncharacterized protein
#=GS A0A2G5TZN6/135-214  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GF SQ 19
Q18225/135-213              TSSSSTEPE----YKPRNVREKVYADGYIMSFDKKSCCGTKEFWRCERKNDCNARMHSDINTREIVRKLHPHNHEK-PSPEELA-
D3NQA3/128-195              ---------------PKKTRLKVFSNGFFMTFDKLSSCQKKYFWRCEYKNTCKARMHTDIVTEKILTFIHEHNHSA-PIDEEVR-
Q9XWQ6/135-203              -------------YTPRGIRERVLFDEHLYVFDKCSYDSKKRFFRCERKNTCPARIHTPFDAERVIHKVQVHNHPP-PTTFDL--
A7DTF1/134-201              ---------------PKKTRLKVFSNGFFMTFDKLSSCQKKYFWRCEYKNTCKARMHTDIVTEKILTFIHEHNHSA-PIDEEVR-
Q9XWR1/134-201              ---------------PKKTRLKVFSNGFFMTFDKLSSCQKKYFWRCEYKNTCKARMHTDIVTEKILTFIHEHNHSA-PIDEEVR-
H3EKM6/41-121               -TSAQSQPQG-KSSKKKAPRFKLTDNGFVFRFDKNSVCGERQFWRCERKSECAARIHTDMKG-TIVKRINYHTHEANPNPDQVY-
G0MEL8/136-214              NSTSSNEPE----YKPRNVREKVYADGYIMSFDKKSCCGTKYFWRCERKNDCNARMHSDIVTREIVRKLHPHNHDK-PSPEELA-
A8XS52/152-221              -------------YKPRNIREKVYADGFIMSFDKKSCCGTKYFWRCERKNDCNARMHSDIVTREIVRKLHPHNHDK-PSPEELA-
A0A2G5SC03/153-222          -------------YKPRNIREKVYADGFIMSFDKKSCCGTKYFWRCERKNDCNARMHSDIVTREIVRKLHPHNHEK-PSPEELA-
E3MCL0/176-245              -------------YKPRNIREKVYADGYIMSFDKKSCCGTKFFWRCERKNDCNARMHSDIATREIVRKLHPHNHEK-PSPEELA-
A0A261ATT8/158-229          -------PE----YKPRNIREKVYADGYIMSFDKKSCCGTKFFWRCERKNDCNARMHSDIATREIVRKLHPHNHEK-PSPEELA-
A0A2H2IMD9/155-225          -------------YKPRNVREKVYADGYIMSFDKKSCCGTKYFWRCERKNDCNARMHSDINTREIVRKLHPHNHDK-PSVEELAF
A0A2G5SBL3/157-226          -------------YKPRNIREKVYADGFIMSFDKKSCCGTKYFWRCERKNDCNARMHSDIVTREIVRKLHPHNHEK-PSPEELA-
A0A2G5SC14/167-236          -------------YKPRNIREKVYADGFIMSFDKKSCCGTKYFWRCERKNDCNARMHSDIVTREIVRKLHPHNHEK-PSPEELA-
A8XLB0/71-140               --------------GTKKARLKVFSNGYFMTFDKISSCRKKHFWRCEYKNTCKARMHTDIESEKIVTYIHDHNHTP-PTAEEIQL
A0A2G5TZQ6/151-219          ---------------AKKARLKVFSNGYFMTFDKISSCRKKHFWRCEYKNTCKARMHTDIESEKIVTYIHDHNHTP-PTAEEIQL
A0A2G5U070/469-537          ---------------AKKARLKVFSNGYFMTFDKISSCRKKHFWRCEYKNTCKARMHTDIESEKIVTYIHDHNHTP-PTAEEIQL
A8XLA6/135-215              --AARAAPKPYKPHRSRMTRDRVFYESHVYIFDKSSYDNKKKFYRCEKKNTCPARLHIPSDSYRVIFMTQEHNHPA-PSVDHWE-
A0A2G5TZN6/135-214          --AARAAPKPYKPHRSRMTRDRVFYESHVYIFDKSSYDNKKKFYRCEKKNTCPARLHIPSDSYRVIFMTQEHNHVA-PSVDHW--
#=GC scorecons              0000000100000235744937864566554999394645849699959859499695653534763356398934095466420
#=GC scorecons_70           ________________*__*_**___*____***_*____*_*****_**_*_****_*_____**___*_***___*__**___
#=GC scorecons_80           ___________________*_**________***_*____*_*_***_**_*_**_*_______*______***___*_______
#=GC scorecons_90           ___________________*__*________***_*____*_*_***_**_*_**_*______________***___*_______
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