# STOCKHOLM 1.0
#=GF ID 2.20.25.10/FF/000051
#=GF DE DNA-directed RNA polymerase subunit
#=GF AC 2.20.25.10/FF/000051
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 46.554
#=GS Q9N4B7/57-108      AC Q9N4B7
#=GS Q9N4B7/57-108      OS Caenorhabditis elegans
#=GS Q9N4B7/57-108      DE DNA-directed RNA polymerase subunit
#=GS Q9N4B7/57-108      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H3F5P1/56-101      AC H3F5P1
#=GS H3F5P1/56-101      OS Pristionchus pacificus
#=GS H3F5P1/56-101      DE DNA-directed RNA polymerase subunit
#=GS H3F5P1/56-101      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A261C4E0/48-108  AC A0A261C4E0
#=GS A0A261C4E0/48-108  OS Caenorhabditis latens
#=GS A0A261C4E0/48-108  DE Uncharacterized protein
#=GS A0A261C4E0/48-108  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS E3NLB5/48-108      AC E3NLB5
#=GS E3NLB5/48-108      OS Caenorhabditis remanei
#=GS E3NLB5/48-108      DE DNA-directed RNA polymerase subunit
#=GS E3NLB5/48-108      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A2G5UCR8/50-108  AC A0A2G5UCR8
#=GS A0A2G5UCR8/50-108  OS Caenorhabditis nigoni
#=GS A0A2G5UCR8/50-108  DE DNA-directed RNA polymerase subunit
#=GS A0A2G5UCR8/50-108  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A9QVW4/48-108      AC A9QVW4
#=GS A9QVW4/48-108      OS Caenorhabditis brenneri
#=GS A9QVW4/48-108      DE DNA-directed RNA polymerase subunit
#=GS A9QVW4/48-108      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS A8XIZ3/50-108      AC A8XIZ3
#=GS A8XIZ3/50-108      OS Caenorhabditis briggsae
#=GS A8XIZ3/50-108      DE DNA-directed RNA polymerase subunit
#=GS A8XIZ3/50-108      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A1I7UZE2/57-108  AC A0A1I7UZE2
#=GS A0A1I7UZE2/57-108  OS Caenorhabditis tropicalis
#=GS A0A1I7UZE2/57-108  DE DNA-directed RNA polymerase subunit
#=GS A0A1I7UZE2/57-108  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS A0A2H2I7L2/57-108  AC A0A2H2I7L2
#=GS A0A2H2I7L2/57-108  OS Caenorhabditis japonica
#=GS A0A2H2I7L2/57-108  DE DNA-directed RNA polymerase subunit
#=GS A0A2H2I7L2/57-108  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS A0A261ATE1/57-108  AC A0A261ATE1
#=GS A0A261ATE1/57-108  OS Caenorhabditis remanei
#=GS A0A261ATE1/57-108  DE Uncharacterized protein
#=GS A0A261ATE1/57-108  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GF SQ 10
Q9N4B7/57-108              ---------GAWANAQVTDETCPVCSHGRAYFMQLQTRSADEPSTIFYRCADNACAHRWKD
H3F5P1/56-101              --------PTAWESAQCTDERCPTCGHGRAYFMQLQTRSADEPMTTFYRCANAF-------
A0A261C4E0/48-108          DIDDVLGGPGAWENAQITDERCPLCSHERAYFMQLQTRSADEPMTIFYRCADNSCAHRWKE
E3NLB5/48-108              DIDDVLGGPGAWENAQITDERCPLCAHERAYFMQLQTRSADEPMTIFYRCADNSCAHRWKE
A0A2G5UCR8/50-108          --DDVLGGPGAWENAQVTDERCPVCSHERAYFMQLQTRSADEPMTIFYRCANNSCAHRWKE
A9QVW4/48-108              DIDDVLGGPGAWENAQITDERCPVCSHERAYFMQLQTRSADEPMTIFYRCANNACAHRWKE
A8XIZ3/50-108              --DDVLGGPGAWENAQVTDERCPLCSHERAYFMQLQTRSADEPMTIFYRCANNSCAHRWKE
A0A1I7UZE2/57-108          ---------GAWENAQVTDERCPVCSHERAYFMQLQTRSADEPMTIFYRCADNACAHRWKE
A0A2H2I7L2/57-108          ---------GAWENAQITDERCPLCSHDRAYFMQLQTRSADEPMTVFYRCADNACAHRWKE
A0A261ATE1/57-108          ---------GAWENAQITDERCPLCANERAYFMQLQTRSADEPMTIFYRCADNSCAHRWKE
#=GC scorecons             0011111136997799599979959575999999999999999796999996645555555
#=GC scorecons_70          _________*******_******_*_*_*************************________
#=GC scorecons_80          __________***_**_******_*_*_*****************_*****__________
#=GC scorecons_90          __________**__**_***_**_*___***************_*_*****__________
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