# STOCKHOLM 1.0
#=GF ID 2.20.25.10/FF/000045
#=GF DE DNA-directed RNA polymerase subunit
#=GF AC 2.20.25.10/FF/000045
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 44.482
#=GS O94703/45-116      AC O94703
#=GS O94703/45-116      OS Schizosaccharomyces pombe 972h-
#=GS O94703/45-116      DE DNA-directed RNA polymerase I subunit RPA12
#=GS O94703/45-116      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS O94703/45-116      DR GO; GO:0005515; GO:0005634; GO:0005730; GO:0005736; GO:0005829; GO:0006353; GO:0006360; 
#=GS A0A0D1CIL2/59-126  AC A0A0D1CIL2
#=GS A0A0D1CIL2/59-126  OS Ustilago maydis 521
#=GS A0A0D1CIL2/59-126  DE DNA-directed RNA polymerase subunit
#=GS A0A0D1CIL2/59-126  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; 
#=GS R9PB71/57-125      AC R9PB71
#=GS R9PB71/57-125      OS Pseudozyma hubeiensis SY62
#=GS R9PB71/57-125      DE DNA-directed RNA polymerase subunit
#=GS R9PB71/57-125      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Pseudozyma; Pseudozyma hubeiensis; 
#=GS V5EYD7/59-126      AC V5EYD7
#=GS V5EYD7/59-126      OS Kalmanozyma brasiliensis GHG001
#=GS V5EYD7/59-126      DE DNA-directed RNA polymerase subunit
#=GS V5EYD7/59-126      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Kalmanozyma; Kalmanozyma brasiliensis; 
#=GS E6ZRH8/59-126      AC E6ZRH8
#=GS E6ZRH8/59-126      OS Sporisorium reilianum SRZ2
#=GS E6ZRH8/59-126      DE DNA-directed RNA polymerase subunit
#=GS E6ZRH8/59-126      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; 
#=GS A0A081CJE3/60-126  AC A0A081CJE3
#=GS A0A081CJE3/60-126  OS Moesziomyces antarcticus
#=GS A0A081CJE3/60-126  DE DNA-directed RNA polymerase subunit
#=GS A0A081CJE3/60-126  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces antarcticus; 
#=GS A0A1K0GB28/59-126  AC A0A1K0GB28
#=GS A0A1K0GB28/59-126  OS Ustilago bromivora
#=GS A0A1K0GB28/59-126  DE DNA-directed RNA polymerase subunit
#=GS A0A1K0GB28/59-126  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago bromivora; 
#=GS I2FR07/59-126      AC I2FR07
#=GS I2FR07/59-126      OS Ustilago hordei Uh4857-4
#=GS I2FR07/59-126      DE DNA-directed RNA polymerase subunit
#=GS I2FR07/59-126      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago hordei; 
#=GS A0A0F7RYE8/59-126  AC A0A0F7RYE8
#=GS A0A0F7RYE8/59-126  OS Sporisorium scitamineum
#=GS A0A0F7RYE8/59-126  DE DNA-directed RNA polymerase subunit
#=GS A0A0F7RYE8/59-126  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium scitamineum; 
#=GS W3VG21/180-246     AC W3VG21
#=GS W3VG21/180-246     OS Moesziomyces aphidis DSM 70725
#=GS W3VG21/180-246     DE Uncharacterized protein
#=GS W3VG21/180-246     DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces aphidis; 
#=GS A0A2N8ULW3/59-126  AC A0A2N8ULW3
#=GS A0A2N8ULW3/59-126  OS Sporisorium reilianum f. sp. reilianum
#=GS A0A2N8ULW3/59-126  DE DNA-directed RNA polymerase subunit
#=GS A0A2N8ULW3/59-126  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; 
#=GS M9MIV5/60-126      AC M9MIV5
#=GS M9MIV5/60-126      OS Moesziomyces antarcticus T-34
#=GS M9MIV5/60-126      DE DNA-directed RNA polymerase subunit
#=GS M9MIV5/60-126      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces antarcticus; 
#=GF SQ 12
O94703/45-116              ETKSSASAFPSALKLKHSIVQV-----ESQKEEAATIEEKCPKCGNDHMTFHTLQLRSADEGSTVFYECPRCAYKFS
A0A0D1CIL2/59-126          ---------PSALRQKRQLVNTAAALGDDKKPQEATIKEKCPGCGNDEMNFHTLQLRSADEGTTVFYDCPKCGYKFS
R9PB71/57-125              N--------AKALRQKRQLVNTAAALGDNNKPQEATIKEKCPGCGNDEMNFHTLQLRSADEGTTVFYDCPKCGYKFS
V5EYD7/59-126              ---------PSALRQKRQLVNTAAALGDDQKPQEATIKEKCPGCGNDEMNFHTLQLRSADEGTTVFYDCPKCGYKFS
E6ZRH8/59-126              ---------PSALRQKRQLVNTAAALGDDNKPQEATIKEKCPGCGNDEMNFHTLQLRSADEGTTVFYDCPKCGYKFS
A0A081CJE3/60-126          ----------SALRQKRQLVNTAASIGNDNKPKEATIKEKCPGCGNDEMNFHTLQLRSADEGTTVFYDCPKCGYKFS
A0A1K0GB28/59-126          ---------PSALRQKRQLVNTAAALGDDNKPQEATIKEKCPGCGNDEMNFHTLQLRSADEGTTVFYDCPKCGYKFS
I2FR07/59-126              ---------PSALRQKRQLVNTAAALGDDNKPQEATIKEKCPGCGNDEMNFHTLQLRSADEGTTVFYDCPKCGYKFS
A0A0F7RYE8/59-126          ---------PSALRQKRQLVNTAAALGDDKKPQEATIKEKCPGCGNDEMNFHTLQLRSADEGTTVFYDCPKCGYKFS
W3VG21/180-246             ----------SALRQKRQLVNTAASIGNDNKPKEATIKEKCPGCGNDEMNFHTLQLRSADEGTTVFYDCPKCGYKFS
A0A2N8ULW3/59-126          ---------PSALRQKRQLVNTAAALGDDNKPQEATIKEKCPGCGNDEMNFHTLQLRSADEGTTVFYDCPKCGYKFS
M9MIV5/60-126              ----------SALRQKRQLVNTAASIGNDNKPKEATIKEKCPGCGNDEMNFHTLQLRSADEGTTVFYDCPKCGYKFS
#=GC scorecons             00000000047997596569554423455595559996999959999596999999999999699997997969999
#=GC scorecons_70          __________****_**_**__________*___***_****_****_*_************_*********_****
#=GC scorecons_80          __________***__*___*__________*___***_****_****_*_************_****_**_*_****
#=GC scorecons_90          ___________**__*___*__________*___***_****_****_*_************_****_**_*_****
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