# STOCKHOLM 1.0
#=GF ID 2.20.25.10/FF/000035
#=GF DE DNA-directed RNA polymerase subunit
#=GF AC 2.20.25.10/FF/000035
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 72.124
#=GS A8IJY1/1-51      AC A8IJY1
#=GS A8IJY1/1-51      OS Chlamydomonas reinhardtii
#=GS A8IJY1/1-51      DE DNA-directed RNA polymerase subunit
#=GS A8IJY1/1-51      DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas; Chlamydomonas reinhardtii; 
#=GS E3JRV9/1-54      AC E3JRV9
#=GS E3JRV9/1-54      OS Puccinia graminis f. sp. tritici CRL 75-36-700-3
#=GS E3JRV9/1-54      DE DNA-directed RNA polymerase subunit
#=GS E3JRV9/1-54      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia graminis; 
#=GS A0A1E3K8A4/1-51  AC A0A1E3K8A4
#=GS A0A1E3K8A4/1-51  OS Cryptococcus amylolentus CBS 6273
#=GS A0A1E3K8A4/1-51  DE DNA-directed RNA polymerase subunit
#=GS A0A1E3K8A4/1-51  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus amylolentus; 
#=GS D8TP01/1-51      AC D8TP01
#=GS D8TP01/1-51      OS Volvox carteri f. nagariensis
#=GS D8TP01/1-51      DE DNA-directed RNA polymerase subunit
#=GS D8TP01/1-51      DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox; Volvox carteri; Volvox carteri f. nagariensis; 
#=GS A0A150H1J8/1-51  AC A0A150H1J8
#=GS A0A150H1J8/1-51  OS Gonium pectorale
#=GS A0A150H1J8/1-51  DE DNA-directed RNA polymerase subunit
#=GS A0A150H1J8/1-51  DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium; Gonium pectorale; 
#=GS A0A1E3K1Y6/1-51  AC A0A1E3K1Y6
#=GS A0A1E3K1Y6/1-51  OS Tsuchiyaea wingfieldii CBS 7118
#=GS A0A1E3K1Y6/1-51  DE DNA-directed RNA polymerase subunit
#=GS A0A1E3K1Y6/1-51  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Tsuchiyaea; Tsuchiyaea wingfieldii; 
#=GS A0A0L0W5X7/1-54  AC A0A0L0W5X7
#=GS A0A0L0W5X7/1-54  OS Puccinia striiformis f. sp. tritici PST-78
#=GS A0A0L0W5X7/1-54  DE DNA-directed RNA polymerase subunit
#=GS A0A0L0W5X7/1-54  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia striiformis; 
#=GS A0A0S2M628/1-51  AC A0A0S2M628
#=GS A0A0S2M628/1-51  OS Cryptococcus neoformans var. neoformans JEC21
#=GS A0A0S2M628/1-51  DE DNA-directed RNA polymerase subunit
#=GS A0A0S2M628/1-51  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A0D0YRL5/1-51  AC A0A0D0YRL5
#=GS A0A0D0YRL5/1-51  OS Cryptococcus gattii VGIV IND107
#=GS A0A0D0YRL5/1-51  DE DNA-directed RNA polymerase subunit
#=GS A0A0D0YRL5/1-51  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIV; 
#=GS A0A0D0X5H2/1-51  AC A0A0D0X5H2
#=GS A0A0D0X5H2/1-51  OS Cryptococcus gattii EJB2
#=GS A0A0D0X5H2/1-51  DE DNA-directed RNA polymerase subunit
#=GS A0A0D0X5H2/1-51  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS A0A0D0VMK5/1-51  AC A0A0D0VMK5
#=GS A0A0D0VMK5/1-51  OS Cryptococcus gattii CA1280
#=GS A0A0D0VMK5/1-51  DE DNA-directed RNA polymerase subunit
#=GS A0A0D0VMK5/1-51  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIII; 
#=GS J9VLW5/1-51      AC J9VLW5
#=GS J9VLW5/1-51      OS Cryptococcus neoformans var. grubii H99
#=GS J9VLW5/1-51      DE DNA-directed RNA polymerase subunit
#=GS J9VLW5/1-51      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A0L0W5X6/1-54  AC A0A0L0W5X6
#=GS A0A0L0W5X6/1-54  OS Puccinia striiformis f. sp. tritici PST-78
#=GS A0A0L0W5X6/1-54  DE Uncharacterized protein
#=GS A0A0L0W5X6/1-54  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia striiformis; 
#=GS A0A1E3HX55/1-51  AC A0A1E3HX55
#=GS A0A1E3HX55/1-51  OS Cryptococcus amylolentus CBS 6039
#=GS A0A1E3HX55/1-51  DE DNA-directed RNA polymerase subunit
#=GS A0A1E3HX55/1-51  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus amylolentus; 
#=GS Q55M04/1-51      AC Q55M04
#=GS Q55M04/1-51      OS Cryptococcus neoformans var. neoformans B-3501A
#=GS Q55M04/1-51      DE DNA-directed RNA polymerase subunit
#=GS Q55M04/1-51      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A226BJ92/1-51  AC A0A226BJ92
#=GS A0A226BJ92/1-51  OS Cryptococcus neoformans var. grubii Bt85
#=GS A0A226BJ92/1-51  DE DNA-directed RNA polymerase subunit
#=GS A0A226BJ92/1-51  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A225ZDH5/1-51  AC A0A225ZDH5
#=GS A0A225ZDH5/1-51  OS Cryptococcus neoformans var. grubii c45
#=GS A0A225ZDH5/1-51  DE DNA-directed RNA polymerase subunit
#=GS A0A225ZDH5/1-51  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GF SQ 17
A8IJY1/1-51              MASRKRGLKFCPETNDLLYPREDKERRVLEYYCKTCNYCVQADPSE------WCVYV-
E3JRV9/1-54              MS----SLKFCRDCANLLYPRADKVHKVLTYACRNCVYFEEAAQTEEERGEKWLVYRN
A0A1E3K8A4/1-51          MP----ALKFCGECNNLLYPKSDNNAKVLLYQCRNCNYTENATI---EPGMAGRVYKH
D8TP01/1-51              MASRKRGLKFCPETNDLLYPREDKERRVLEYYCKTCNYCVQADPSE------WCVYV-
A0A150H1J8/1-51          MASRKRGLKFCPETNDLLYPREDKERRVLEYYCKTCNYCVQADPSE------WCVYV-
A0A1E3K1Y6/1-51          MP----ALKFCGECNNLLYPKSDNNAKVLLYQCRNCNYTENATI---EPGMAGRVYKH
A0A0L0W5X7/1-54          MS----SLKFCRDCANLLYPRADKVHKVLTYACRNCVYFEEAAQTEEERGEKWLVYRN
A0A0S2M628/1-51          MP----TLKFCGECNNLLYPKSDNNAKVLLYQCRNCNYTENATV---EPGMAGCVYKH
A0A0D0YRL5/1-51          MP----TLKFCGECNNLLYPKSDNNAKVLLYQCRNCNYTENATV---EPGMAGCVYKH
A0A0D0X5H2/1-51          MP----TLKFCGECNNLLYPKSDNNAKVLLYQCRNCNYTENATV---EPGMAGCVYKH
A0A0D0VMK5/1-51          MP----TLKFCGECNNLLYPKSDNNAKVLLYQCRNCNYTENATV---EPGMAGCVYKH
J9VLW5/1-51              MP----TLKFCGECNNLLYPKSDNNAKVLLYQCRNCNYTENAAI---EPGMAGCVYKH
A0A0L0W5X6/1-54          MS----SLKFCRDCANLLYPRADKVHKVLTYACRNCVYFEEAAQTEEERGEKWLVYRN
A0A1E3HX55/1-51          MP----ALKFCGECNNLLYPKSDNNAKVLLYQCRNCNYTENATI---EPGMAGRVYKH
Q55M04/1-51              MP----TLKFCGECNNLLYPKSDNNAKVLLYQCRNCNYTENATV---EPGMAGCVYKH
A0A226BJ92/1-51          MP----TLKFCGECNNLLYPKSDNNAKVLLYQCRNCNYTENAAI---EPGMAGCVYKH
A0A225ZDH5/1-51          MP----TLKFCGECNNLLYPKSDNNAKVLLYQCRNCNYTENATI---EPGMAGCVYKH
#=GC scorecons           9500004999947566999974964479939497696945594312042422549943
#=GC scorecons_70        *______****_*_*******_*___***_*_****_*___*____________**__
#=GC scorecons_80        *______****_*___****__*___***_*_**_*_*___*____________**__
#=GC scorecons_90        *______****_____****__*____**_*_*__*_*___*____________**__
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