# STOCKHOLM 1.0
#=GF ID 2.20.25.10/FF/000031
#=GF DE DNA-directed RNA polymerase subunit
#=GF AC 2.20.25.10/FF/000031
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 76.260
#=GS O96159/54-106      AC O96159
#=GS O96159/54-106      OS Plasmodium falciparum 3D7
#=GS O96159/54-106      DE DNA-directed RNA polymerase subunit
#=GS O96159/54-106      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS O96159/54-106      DR GO; GO:0003700; GO:0005666; GO:0006383; 
#=GS Q9ZQC0/53-106      AC Q9ZQC0
#=GS Q9ZQC0/53-106      OS Arabidopsis thaliana
#=GS Q9ZQC0/53-106      DE DNA-directed RNA polymerase subunit
#=GS Q9ZQC0/53-106      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9ZQC0/53-106      DR GO; GO:0005634; GO:0005737; 
#=GS Q9LNK0/52-106      AC Q9LNK0
#=GS Q9LNK0/52-106      OS Arabidopsis thaliana
#=GS Q9LNK0/52-106      DE DNA-directed RNA polymerase subunit
#=GS Q9LNK0/52-106      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A384LJI7/52-106  AC A0A384LJI7
#=GS A0A384LJI7/52-106  OS Arabidopsis thaliana
#=GS A0A384LJI7/52-106  DE DNA-directed RNA polymerase subunit
#=GS A0A384LJI7/52-106  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0E7M3/64-116      AC A0E7M3
#=GS A0E7M3/64-116      OS Paramecium tetraurelia
#=GS A0E7M3/64-116      DE DNA-directed RNA polymerase subunit
#=GS A0E7M3/64-116      DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS K6UIJ2/54-106      AC K6UIJ2
#=GS K6UIJ2/54-106      OS Plasmodium cynomolgi strain B
#=GS K6UIJ2/54-106      DE DNA-directed RNA polymerase subunit
#=GS K6UIJ2/54-106      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium); Plasmodium cynomolgi; 
#=GS V4L391/49-103      AC V4L391
#=GS V4L391/49-103      OS Eutrema salsugineum
#=GS V4L391/49-103      DE DNA-directed RNA polymerase subunit
#=GS V4L391/49-103      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A1J3FL21/50-103  AC A0A1J3FL21
#=GS A0A1J3FL21/50-103  OS Noccaea caerulescens
#=GS A0A1J3FL21/50-103  DE DNA-directed RNA polymerase subunit
#=GS A0A1J3FL21/50-103  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS A0A060RN06/54-106  AC A0A060RN06
#=GS A0A060RN06/54-106  OS Plasmodium reichenowi
#=GS A0A060RN06/54-106  DE DNA-directed RNA polymerase subunit
#=GS A0A060RN06/54-106  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS A0A2P9B7F4/54-106  AC A0A2P9B7F4
#=GS A0A2P9B7F4/54-106  OS Plasmodium sp. gorilla clade G1
#=GS A0A2P9B7F4/54-106  DE DNA-directed RNA polymerase subunit
#=GS A0A2P9B7F4/54-106  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium sp. gorilla clade G1; 
#=GS R0I5V3/53-106      AC R0I5V3
#=GS R0I5V3/53-106      OS Capsella rubella
#=GS R0I5V3/53-106      DE DNA-directed RNA polymerase subunit
#=GS R0I5V3/53-106      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS W7FDM9/54-106      AC W7FDM9
#=GS W7FDM9/54-106      OS Plasmodium falciparum 7G8
#=GS W7FDM9/54-106      DE DNA-directed RNA polymerase subunit
#=GS W7FDM9/54-106      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JJL5/54-106      AC W7JJL5
#=GS W7JJL5/54-106      OS Plasmodium falciparum UGT5.1
#=GS W7JJL5/54-106      DE DNA-directed RNA polymerase subunit
#=GS W7JJL5/54-106      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7K819/54-106  AC A0A0L7K819
#=GS A0A0L7K819/54-106  OS Plasmodium falciparum HB3
#=GS A0A0L7K819/54-106  DE DNA-directed RNA polymerase subunit
#=GS A0A0L7K819/54-106  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L1I777/54-106  AC A0A0L1I777
#=GS A0A0L1I777/54-106  OS Plasmodium falciparum IGH-CR14
#=GS A0A0L1I777/54-106  DE DNA-directed RNA polymerase subunit
#=GS A0A0L1I777/54-106  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BUW6/54-106  AC A0A2I0BUW6
#=GS A0A2I0BUW6/54-106  OS Plasmodium falciparum NF54
#=GS A0A2I0BUW6/54-106  DE DNA-directed RNA polymerase subunit
#=GS A0A2I0BUW6/54-106  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7LVR5/54-106  AC A0A0L7LVR5
#=GS A0A0L7LVR5/54-106  OS Plasmodium falciparum Dd2
#=GS A0A0L7LVR5/54-106  DE DNA-directed RNA polymerase subunit
#=GS A0A0L7LVR5/54-106  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4INS1/54-106      AC W4INS1
#=GS W4INS1/54-106      OS Plasmodium falciparum NF135/5.C10
#=GS W4INS1/54-106      DE DNA-directed RNA polymerase subunit
#=GS W4INS1/54-106      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024XFD6/54-106  AC A0A024XFD6
#=GS A0A024XFD6/54-106  OS Plasmodium falciparum CAMP/Malaysia
#=GS A0A024XFD6/54-106  DE DNA-directed RNA polymerase subunit
#=GS A0A024XFD6/54-106  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GF SQ 19
O96159/54-106              -AVDINNKNMSKTQAVCPKCTNDEAYFYTLQIRSADEPSTIFYICVKCNYHWKE-
Q9ZQC0/53-106              -VTKDDIPTAAETEAPCPRCGHDKAYFKSMQIRSADEPESRFYRCLKCEFTWREE
Q9LNK0/52-106              VVTKDDIPTAAETEAPCPRCGHDKAYFKSMQIRSADEPESRFYRCLKCEFTWREE
A0A384LJI7/52-106          VVTKDDIPTAAETEAPCPRCGHDKAYFKSMQIRSADEPESRFYRCLKCEFTWREE
A0E7M3/64-116              -SKLSDQSHRAVIEQVCPKCSHEEAYFSTAQLRSADEGSTVFYECVKCQFRYQL-
K6UIJ2/54-106              -AVDVNNKNMSKTQAVCPKCTHDEAYFYSLQIRSADEPSTIFYICIKCNHHWKE-
V4L391/49-103              VVTKEDIPTGPETEAPCPRCGHDKAYFRSMQIRSADEPESRFYRCLKCELTWREE
A0A1J3FL21/50-103          -VTKEDIPKEAETETPCPRCGHDKAYFRSMQIRSADEPESRFYRCLKCELTWREE
A0A060RN06/54-106          -AVDINNKNMSKTQAVCPKCTNDEAYFYTLQIRSADEPSTIFYICVKCNYHWKE-
A0A2P9B7F4/54-106          -AVDINNKNMSKTQAVCPKCTNDEAYFYTLQIRSADEPSTIFYICVKCNYHWKE-
R0I5V3/53-106              -VTKADIPTAAETEAPCPRCGHDKAYFKSMQIRSADEPESRFYRCLKCEFTWREE
W7FDM9/54-106              -AVDINNKNMSKTQAVCPKCTNDEAYFYTLQIRSADEPSTIFYICVKCNYHWKE-
W7JJL5/54-106              -AVDINNKNMSKTQAVCPKCTNDEAYFYTLQIRSADEPSTIFYICVKCNYHWKE-
A0A0L7K819/54-106          -AVDINNKNMSKTQAVCPKCTNDEAYFYTLQIRSADEPSTIFYICVKCNYHWKE-
A0A0L1I777/54-106          -AVDINNKNMSKTQAVCPKCTNDEAYFYTLQIRSADEPSTIFYICVKCNYHWKE-
A0A2I0BUW6/54-106          -AVDINNKNMSKTQAVCPKCTNDEAYFYTLQIRSADEPSTIFYICVKCNYHWKE-
A0A0L7LVR5/54-106          -AVDINNKNMSKTQAVCPKCTNDEAYFYTLQIRSADEPSTIFYICVKCNYHWKE-
W4INS1/54-106              -AVDINNKNMSKTQAVCPKCTNDEAYFYTLQIRSADEPSTIFYICVKCNYHWKE-
A0A024XFD6/54-106          -AVDINNKNMSKTQAVCPKCTNDEAYFYTLQIRSADEPSTIFYICVKCNYHWKE-
#=GC scorecons             0554364454557675997956869994659899999756499496995657671
#=GC scorecons_70          _____*______***_****__*_***___********___**_****___***_
#=GC scorecons_80          ____________*___**_*__*_***___********___**_*_**___*_*_
#=GC scorecons_90          ________________**_*__*_***___*_*****____**_*_**_______
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