# STOCKHOLM 1.0
#=GF ID 2.20.20.160/FF/000002
#=GF DE Doublesex cognate 73A
#=GF AC 2.20.20.160/FF/000002
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 10.533
#=GS Q9VV62/488-578      AC Q9VV62
#=GS Q9VV62/488-578      OS Drosophila melanogaster
#=GS Q9VV62/488-578      DE Doublesex cognate 73A
#=GS Q9VV62/488-578      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VV62/488-578      DR GO; GO:0005214; GO:0005576; GO:0040003; GO:0098595; 
#=GS A0A1I8M5G3/473-560  AC A0A1I8M5G3
#=GS A0A1I8M5G3/473-560  OS Musca domestica
#=GS A0A1I8M5G3/473-560  DE Uncharacterized protein
#=GS A0A1I8M5G3/473-560  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Muscinae; Muscini; Musca; Musca; Musca domestica; 
#=GS W8C6A2/82-171       AC W8C6A2
#=GS W8C6A2/82-171       OS Ceratitis capitata
#=GS W8C6A2/82-171       DE Uncharacterized protein
#=GS W8C6A2/82-171       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Dacinae; Ceratitidini; Ceratitis; Ceratitis; Ceratitis capitata; 
#=GS A0A1I8NPN7/495-582  AC A0A1I8NPN7
#=GS A0A1I8NPN7/495-582  OS Stomoxys calcitrans
#=GS A0A1I8NPN7/495-582  DE Uncharacterized protein
#=GS A0A1I8NPN7/495-582  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Muscinae; Stomoxyini; Stomoxys; Stomoxys calcitrans; 
#=GS A0A034VAN4/489-578  AC A0A034VAN4
#=GS A0A034VAN4/489-578  OS Bactrocera dorsalis
#=GS A0A034VAN4/489-578  DE Uncharacterized protein
#=GS A0A034VAN4/489-578  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Dacinae; Dacini; Bactrocera; Bactrocera; Bactrocera dorsalis; 
#=GS B4J0V9/469-560      AC B4J0V9
#=GS B4J0V9/469-560      OS Drosophila grimshawi
#=GS B4J0V9/469-560      DE GH15588
#=GS B4J0V9/469-560      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS B4LI49/466-556      AC B4LI49
#=GS B4LI49/466-556      OS Drosophila virilis
#=GS B4LI49/466-556      DE Uncharacterized protein
#=GS B4LI49/466-556      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS B4MMH8/513-604      AC B4MMH8
#=GS B4MMH8/513-604      OS Drosophila willistoni
#=GS B4MMH8/513-604      DE Uncharacterized protein
#=GS B4MMH8/513-604      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS B3M4I2/495-586      AC B3M4I2
#=GS B3M4I2/495-586      OS Drosophila ananassae
#=GS B3M4I2/495-586      DE Uncharacterized protein
#=GS B3M4I2/495-586      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS A0A1W4UFV5/491-581  AC A0A1W4UFV5
#=GS A0A1W4UFV5/491-581  OS Drosophila ficusphila
#=GS A0A1W4UFV5/491-581  DE uncharacterized protein LOC108089377
#=GS A0A1W4UFV5/491-581  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B4H222/461-552      AC B4H222
#=GS B4H222/461-552      OS Drosophila persimilis
#=GS B4H222/461-552      DE GL17992
#=GS B4H222/461-552      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS A0A3B0KKN3/518-609  AC A0A3B0KKN3
#=GS A0A3B0KKN3/518-609  OS Drosophila guanche
#=GS A0A3B0KKN3/518-609  DE Uncharacterized protein
#=GS A0A3B0KKN3/518-609  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS B4QMT8/487-577      AC B4QMT8
#=GS B4QMT8/487-577      OS Drosophila simulans
#=GS B4QMT8/487-577      DE GD12468
#=GS B4QMT8/487-577      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B4HJN5/486-576      AC B4HJN5
#=GS B4HJN5/486-576      OS Drosophila sechellia
#=GS B4HJN5/486-576      DE GM24399
#=GS B4HJN5/486-576      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B3NHZ7/487-577      AC B3NHZ7
#=GS B3NHZ7/487-577      OS Drosophila erecta
#=GS B3NHZ7/487-577      DE Uncharacterized protein
#=GS B3NHZ7/487-577      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4PKE7/487-577      AC B4PKE7
#=GS B4PKE7/487-577      OS Drosophila yakuba
#=GS B4PKE7/487-577      DE Uncharacterized protein
#=GS B4PKE7/487-577      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 16
Q9VV62/488-578              -NKKTATAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDTKKKAITLAKTCEATTE
A0A1I8M5G3/473-560          ----LNGAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDGKKKAITLAKTCEATTE
W8C6A2/82-171               --KPSATAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDSKKKAITLAKTCEATTE
A0A1I8NPN7/495-582          ----ISGAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDGKKKAITLAKTCEATTE
A0A034VAN4/489-578          --KPSATAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDSKKKAITLAKTCEATTE
B4J0V9/469-560              DNKKTATAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDNKKKAITLAKTCEATTE
B4LI49/466-556              -NKKTATAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDNKKKAITLAKTCEATTE
B4MMH8/513-604              DNKKTATAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDNKKKAITLAKTCEATTE
B3M4I2/495-586              DNKKTATAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDNKKKAITLAKTCEATTE
A0A1W4UFV5/491-581          -NKKTATAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDNKKKAITLAKTCEATTE
B4H222/461-552              DNKKTATAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDNKKKAITLAKTCEATTE
A0A3B0KKN3/518-609          DNKKTATAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDNKKKAITLAKTCEATTE
B4QMT8/487-577              -NKKTATAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDSKKKAITLAKTCEATTE
B4HJN5/486-576              -NKKTATAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDTKKKAITLAKTCEATTE
B3NHZ7/487-577              -NKKTATAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDTKKKAITLAKTCEATTE
B4PKE7/487-577              -NKKTATAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDDQHTTKLVGDTKKKAITLAKTCEATTE
#=GC scorecons              02435669999999999999999999999999999999999999999999999999999999999999999999949999999999999999
#=GC scorecons_70           _____**********************************************************************_****************
#=GC scorecons_80           _______********************************************************************_****************
#=GC scorecons_90           _______********************************************************************_****************
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