# STOCKHOLM 1.0
#=GF ID 2.170.16.10/FF/000013
#=GF DE Replication factor C small subunit
#=GF AC 2.170.16.10/FF/000013
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 82.206
#=GS Q58817/625-776  AC Q58817
#=GS Q58817/625-776  OS Methanocaldococcus jannaschii DSM 2661
#=GS Q58817/625-776  DE Replication factor C small subunit
#=GS Q58817/625-776  DR ORG; Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus; Methanocaldococcus jannaschii; 
#=GS Q5JIT1/560-708  AC Q5JIT1
#=GS Q5JIT1/560-708  OS Thermococcus kodakarensis KOD1
#=GS Q5JIT1/560-708  DE DNA replication licensing factor, MCM2/3/5 family
#=GS Q5JIT1/560-708  DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus kodakarensis; 
#=GS Q58192/98-251   AC Q58192
#=GS Q58192/98-251   OS Methanocaldococcus jannaschii DSM 2661
#=GS Q58192/98-251   DE Transcription initiation factor IIB
#=GS Q58192/98-251   DR ORG; Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus; Methanocaldococcus jannaschii; 
#=GS H1KYI5/621-772  AC H1KYI5
#=GS H1KYI5/621-772  OS Methanotorris formicicus Mc-S-70
#=GS H1KYI5/621-772  DE Transcriptional regulator, XRE family
#=GS H1KYI5/621-772  DR ORG; Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris; Methanotorris formicicus; 
#=GF SQ 4
Q58817/625-776          NASVSKDTPILVKIDGKVKRTTFEEL-DKIYFETNDENEM------YKKVDNLEVLTVD-ENFRVRWRKVSTIIRHKV-DKILRIKFEGG-YIELTGNHSIMMLDENGLVAKKASDIKVGDCFLSFVANIEGEKDRLDLKEFEPKDITSRVKIINDFDIDE-------D
Q5JIT1/560-708          E---------LLLADG--RKVKIGELVDKLI-EKNRDRVILGKDTEILPVEDIELLAYDLEKREIVKVKADRVSRHKAPERFIKLRFSNGREITVTPEHPVMVWENGEITEKPAEKITPGDIALGVLRYP-----IQVDGKFKER---YRDMREAEDYQDYLYSRGVVS
Q58192/98-251           TYSVDYNEPIIIKENGEIKVVKIGELIDKII--ENSENIRREGILEIAKCKGIEVIAFN-SNYKFKFMPVSEVSRHPV-SEMFEIVVEGNKKVRVTRSHSVFTIRDNEVVPIRVDELKVGDILVLAKELPNIEEDIEIDKKFSK----ILGYIIAEGYYDD-------K
H1KYI5/621-772          NASVSKNTPILVKIDGKIKRTTFEEL-DKIYFNTNDENEM------YKKVDNLEVLTVD-ENFKVRWRKVSTVIRHKV-DKILRVKFEGG-YIELTGNHSIMMLDENGLVSKKASDIKVGDCLLSFIANTEGEKDKLDLKEFEPKDITSRVKVINEFEFDE-------D
#=GC scorecons          3133112133654269226354559919964123936533000002424544596653605534432255537499550444445355551273593395654344555524364465599436232324213233233559332111242234571329300000003
#=GC scorecons_70       __________*___**__*_____**_**_____*_*________________*_*__*_____________*_**________________*__*__*_*_______________*__**__*_________________*_____________*___*_________
#=GC scorecons_80       _______________*________**_**_____*__________________*__________________*_**___________________*__*____________________**____________________*_____________*___*_________
#=GC scorecons_90       _______________*________**_**_____*__________________*____________________**___________________*__*____________________**____________________*_________________*_________
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