# STOCKHOLM 1.0
#=GF ID 2.170.120.12/FF/000011
#=GF DE DNA-directed RNA polymerase, alpha subunit, putative
#=GF AC 2.170.120.12/FF/000011
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 4.768
#=GS Q8IKB1/509-647      AC Q8IKB1
#=GS Q8IKB1/509-647      OS Plasmodium falciparum 3D7
#=GS Q8IKB1/509-647      DE DNA-directed RNA polymerase, alpha subunit,putative
#=GS Q8IKB1/509-647      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IKB1/509-647      DR GO; GO:0003899; GO:0006351; 
#=GS A0A151LBG3/478-616  AC A0A151LBG3
#=GS A0A151LBG3/478-616  OS Plasmodium gaboni
#=GS A0A151LBG3/478-616  DE Putative DNA-directed RNA polymerase, alpha subunit
#=GS A0A151LBG3/478-616  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium gaboni; 
#=GS A0A151L5Y7/513-651  AC A0A151L5Y7
#=GS A0A151L5Y7/513-651  OS Plasmodium reichenowi
#=GS A0A151L5Y7/513-651  DE DNA-directed RNA polymerase, alpha subunit, putative
#=GS A0A151L5Y7/513-651  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS A0A2I0C244/509-647  AC A0A2I0C244
#=GS A0A2I0C244/509-647  OS Plasmodium falciparum NF54
#=GS A0A2I0C244/509-647  DE DNA-directed RNA polymerase
#=GS A0A2I0C244/509-647  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024X1M2/422-560  AC A0A024X1M2
#=GS A0A024X1M2/422-560  OS Plasmodium falciparum CAMP/Malaysia
#=GS A0A024X1M2/422-560  DE Uncharacterized protein
#=GS A0A024X1M2/422-560  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7M2D4/461-599  AC A0A0L7M2D4
#=GS A0A0L7M2D4/461-599  OS Plasmodium falciparum Dd2
#=GS A0A0L7M2D4/461-599  DE Uncharacterized protein
#=GS A0A0L7M2D4/461-599  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4IYH5/495-633      AC W4IYH5
#=GS W4IYH5/495-633      OS Plasmodium falciparum Palo Alto/Uganda
#=GS W4IYH5/495-633      DE Uncharacterized protein
#=GS W4IYH5/495-633      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FD78/487-625      AC W7FD78
#=GS W7FD78/487-625      OS Plasmodium falciparum 7G8
#=GS W7FD78/487-625      DE Uncharacterized protein
#=GS W7FD78/487-625      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JKY1/190-328      AC W7JKY1
#=GS W7JKY1/190-328      OS Plasmodium falciparum NF54
#=GS W7JKY1/190-328      DE Uncharacterized protein
#=GS W7JKY1/190-328      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4I7V8/506-644      AC W4I7V8
#=GS W4I7V8/506-644      OS Plasmodium falciparum NF135/5.C10
#=GS W4I7V8/506-644      DE Uncharacterized protein
#=GS W4I7V8/506-644      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WGL3/477-615  AC A0A024WGL3
#=GS A0A024WGL3/477-615  OS Plasmodium falciparum MaliPS096_E11
#=GS A0A024WGL3/477-615  DE Uncharacterized protein
#=GS A0A024WGL3/477-615  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FQX2/497-635      AC W7FQX2
#=GS W7FQX2/497-635      OS Plasmodium falciparum Santa Lucia
#=GS W7FQX2/497-635      DE Uncharacterized protein
#=GS W7FQX2/497-635      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L1I6V8/507-645  AC A0A0L1I6V8
#=GS A0A0L1I6V8/507-645  OS Plasmodium falciparum IGH-CR14
#=GS A0A0L1I6V8/507-645  DE DNA-directed RNA polymerase
#=GS A0A0L1I6V8/507-645  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7K626/413-551  AC A0A0L7K626
#=GS A0A0L7K626/413-551  OS Plasmodium falciparum HB3
#=GS A0A0L7K626/413-551  DE Uncharacterized protein
#=GS A0A0L7K626/413-551  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VKF0/480-618  AC A0A024VKF0
#=GS A0A024VKF0/480-618  OS Plasmodium falciparum FCH/4
#=GS A0A024VKF0/480-618  DE Uncharacterized protein
#=GS A0A024VKF0/480-618  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JPH3/489-627      AC W7JPH3
#=GS W7JPH3/489-627      OS Plasmodium falciparum UGT5.1
#=GS W7JPH3/489-627      DE Uncharacterized protein
#=GS W7JPH3/489-627      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VYQ5/464-602  AC A0A024VYQ5
#=GS A0A024VYQ5/464-602  OS Plasmodium falciparum Tanzania (2000708)
#=GS A0A024VYQ5/464-602  DE Uncharacterized protein
#=GS A0A024VYQ5/464-602  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024UYW8/494-632  AC A0A024UYW8
#=GS A0A024UYW8/494-632  OS Plasmodium falciparum Vietnam Oak-Knoll (FVO)
#=GS A0A024UYW8/494-632  DE Uncharacterized protein
#=GS A0A024UYW8/494-632  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A060S0G9/503-641  AC A0A060S0G9
#=GS A0A060S0G9/503-641  OS Plasmodium reichenowi
#=GS A0A060S0G9/503-641  DE DNA-directed RNA polymerase, alpha subunit, putative
#=GS A0A060S0G9/503-641  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GF SQ 19
Q8IKB1/509-647              GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
A0A151LBG3/478-616          GYAIVAIKIHNMNEDTKIDNLQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEGGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVNKNYMPISSSF
A0A151L5Y7/513-651          GYAIVAIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVNKNYMPISSSF
A0A2I0C244/509-647          GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
A0A024X1M2/422-560          GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
A0A0L7M2D4/461-599          GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
W4IYH5/495-633              GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
W7FD78/487-625              GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
W7JKY1/190-328              GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
W4I7V8/506-644              GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
A0A024WGL3/477-615          GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
W7FQX2/497-635              GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
A0A0L1I6V8/507-645          GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
A0A0L7K626/413-551          GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
A0A024VKF0/480-618          GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
W7JPH3/489-627              GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
A0A024VYQ5/464-602          GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
A0A024UYW8/494-632          GYAIVGIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVHKNYMPISSSF
A0A060S0G9/503-641          GYAIVAIKVHNMNEDTKINNVQEDLLEIALNISDVCIYSKEINLESNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTIKEDGFIDISIKIEYGKGHWLTYDKGLYKRERGSDNDCMKKREIKEVVNKNYMPISSSF
#=GC scorecons              9999959979999999996969999999999999999999999999999999999999999999999999999999999999969999999999999999999999999999999999999999999959999999999
#=GC scorecons_70           *****_**************************************************************************************************************************_**********
#=GC scorecons_80           *****_************_*_**************************************************************_********************************************_**********
#=GC scorecons_90           *****_**_*********_*_**************************************************************_********************************************_**********
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