# STOCKHOLM 1.0
#=GF ID 2.160.20.10/FF/000070
#=GF DE PKHD1 like 1
#=GF AC 2.160.20.10/FF/000070
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 85.333
#=GS W4YHW0/3114-3454            AC W4YHW0
#=GS W4YHW0/3114-3454            OS Strongylocentrotus purpuratus
#=GS W4YHW0/3114-3454            DE Uncharacterized protein
#=GS W4YHW0/3114-3454            DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS C3YI00/3221-3514            AC C3YI00
#=GS C3YI00/3221-3514            OS Branchiostoma floridae
#=GS C3YI00/3221-3514            DE Uncharacterized protein
#=GS C3YI00/3221-3514            DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS W5M598/2944-3323            AC W5M598
#=GS W5M598/2944-3323            OS Lepisosteus oculatus
#=GS W5M598/2944-3323            DE PKHD1 like 1
#=GS W5M598/2944-3323            DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS C3ZYG3/1005-1085_1120-1409  AC C3ZYG3
#=GS C3ZYG3/1005-1085_1120-1409  OS Branchiostoma floridae
#=GS C3ZYG3/1005-1085_1120-1409  DE Uncharacterized protein
#=GS C3ZYG3/1005-1085_1120-1409  DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3XUL6/2682-3001            AC C3XUL6
#=GS C3XUL6/2682-3001            OS Branchiostoma floridae
#=GS C3XUL6/2682-3001            DE Uncharacterized protein
#=GS C3XUL6/2682-3001            DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3XUL4/1543-1838            AC C3XUL4
#=GS C3XUL4/1543-1838            OS Branchiostoma floridae
#=GS C3XUL4/1543-1838            DE Uncharacterized protein
#=GS C3XUL4/1543-1838            DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3YHZ9/3158-3535            AC C3YHZ9
#=GS C3YHZ9/3158-3535            OS Branchiostoma floridae
#=GS C3YHZ9/3158-3535            DE Uncharacterized protein
#=GS C3YHZ9/3158-3535            DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3ZLC7/2969-3342            AC C3ZLC7
#=GS C3ZLC7/2969-3342            OS Branchiostoma floridae
#=GS C3ZLC7/2969-3342            DE Uncharacterized protein
#=GS C3ZLC7/2969-3342            DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS W5M5C1/2975-3355            AC W5M5C1
#=GS W5M5C1/2975-3355            OS Lepisosteus oculatus
#=GS W5M5C1/2975-3355            DE PKHD1 like 1
#=GS W5M5C1/2975-3355            DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GF SQ 9
W4YHW0/3114-3454                    -------------------------NSISLEKDTNWKVGDEIAVATTDYETWHTETFAIQEVT-DARTFVLNATFQHLHTAATEHE-NTQN-QYRIAAEVGLFTRNIVIEGASYDGIFTELFGARVLVGSFYQDQDFFQG--RAYISNVQFKHTGQEGYVESYDPRFSVAFLDLRDPFFNTLPSSLTGCSFHHGFSTAIGAYSSNKLIIKDNIVHHTIGAGIIIEGSEDILLEHNLVMLSISKATYQDRWQVENLNWFGSITFDSADNLVMRDNAVAGSEKAGIMMDGEEC----GVDSRFSQNVVHSALQGVMLF-KRSQPQCSSVAN--FLIYRCYHYGIYVQIN-SDLHVTNVTLADNKNAICPMFYSPHALTHKK-----------------------------------------------------
C3YI00/3221-3514                    ---------------------------------------------------------------------------------------D-GT-TYTMAAEVGLLTRNVKIIGDDYPNLFKESFGARMMVSKFADETKEYIGKCYARVTNTEFYRTGQEGWTDFFDARYSIAYMDTGTV-DSIRPSYVRKNAFHNCFSVAVGVFGATGIEVDDNVVHHTVGQAINVWGSSN-KIRKNLVALNIWTGSYNGRTEENNVDWDAAIEVQNGRGIVLQGNRVAGAEKAGYTIDGEPCTG--NTAEAWSDNEVHGVLVGVWSL-KECFPPCAKVRG--FYVWKAFDFGIYFQSQ-CNLELEGNTIADSRLGIFHMVIGPSALTHVAVNNYVQMENSLF-----------------------------------------
W5M598/2944-3323                    TLQLHGLPRSVYHTK-LAASAGAGSFNILLEESVDWQVDDDLVITTTSYDTWQTEIRKIAMISADGRNVTLNQSLSYTHIAETVNVSETGQ-QYRLAADVGLLSRNIKIIGQDYPGWYQESFGARVLVGSFSNGVYVYKG--NAQIRNVEFYHTGQEGYQDSFDPRYSVAFLDLGQV--SANDSYVQGCSFHHGFSPAIGVFGTDGMNIDDNVIYFTVGEGIRVWGSNI-KVRRNLVTVAVWPGSYQDREETLNSLWHAAIEVNEGMNIVLQDNIVAGFERVAYHINGEPCPGTFNPVESWHGNEAHGGLYGVYMN-KDGLASCSLIQG--FTVWKCWDYGIYFQTV-MSIQISDVTLVDNGMGVLPIIYTPPSVSHQYSDKTVQIQNSLI-----------------------------------------
C3ZYG3/1005-1085_1120-1409          -------------TS-LTQTANAGDNTITLADPVDWEAGQEIVITPTGFTTWETETFTISAVSADGMTLTLDGDLQYTHTYASDTFDN-GE-SYTIASSAG----------------------------------QAYTG--YARISNVEFDRTGQEGWTDRYDPRYSLAFIDLGDV-PADRPSFVDNSVFHHGFAPGIGVFGTNNLNLTSNVVHHTVGQGIILTGMGN-LLSDTLITHSIWPGTYQDRYESASQKWEGALEVQDATNVILKGNHIAGAERVGIHMDGEPCT---DDSWGWSDNVIHTAIHGIHIY-MDGVGECSRVRN--FVIWKCFSYGVYFQSK-DSAVLESNTLVDNGIGSFLSIIGPESLSHVMVDKTVTVRNSLYVGRSSAFDCETDVVDWDDDNFKIARKVGGIGFKSGKGDSPG
C3XUL6/2682-3001                    --------------H-LAQTAAAGADTITLADVVDWQVDEEIVITTTSFDAWQTETFKITDVSTDGRTLTLNSSLAYEHIYHSDTV-N-GK-TYTMAAEVGLLTRNIKIEGADYQGLFSESFGARVLVGSFNTGGQTYTG--YARIKNVEFYHTGQEGWNAFYDPRFSLAFVNTGDV-SDAKPSLVENNAFHNGFSPGIGVYGTNKLEIVNNIVHHTVGQGMIIEGSWN-SLTRNLIALSIWPGAYQDRKEENSEKWEAALEIMDATNIVLKDNVIAGAERVGVHLDGEPCPGVDNPVDSWSGNVIHSDV----TF-SNFGEACGGQQDVAFHTWN----------------------------------SNEDLMHPI---------------------ET------------------------------
C3XUL4/1543-1838                    ----YTRDYTLEATHIFIQTAAAGANTITLADAVDWQVDEEIVITTTSFDAWQTETFKITDVSTDGRTLTLNSSLAYEHIYHSDTV-N-GK-TYTMAAEVGLLTRNIKIKGADYQGLFSESFGARVLVGSFNTGGQTYTG--YARIKNVEFYHTGQEGWNAFYDPRFSLAFVNTGDV-SDAKPSLVENNAFHNGFSPGIGVYGTNKLEIINNIVHHTVGQGMIIEGSSN-TLTRNLIALSIWPGAYQDRKEENSEKWEAALEIMDATNIVLKDNVIAGAERVGVHLDGEPCPGVDNPVDSWSGNVIH-----------------------------------------------------------------------------------------------------------------------------
C3YHZ9/3158-3535                    -------SRVVTFTR-LAQTGNVGDSSITLVDAVDWAVGDDIAIATTTFDVWQTETFKIVSLSEDTTTITLNGTLAYKHMAETLTLAD-GQTTVTMAAEVGLLSRNIQIIGEDYNDLFEESFGARVLVGTFTQKSVEYTG--YARVENVEFYHTGQEGWTDFYDPRYSLAFLDVGLVEDDHRKSYIRKNTFHSGFSPAIGVFGTQNMDVEDNVIHHTVGPAMRIWGVDN-KVRRNLAMLLIWPDGYQDRGE-DSPEWTPAFDMFEALSPVLVGNVVAGSQRSGFRVDGEPCSG--NLAEAWSDNIAHSCMVGVLVFPGDGLKPCSRIAH--FTVWKAHDYGIYFQTDTTDVIVEDVVVVDSQVGIYTMLYGAKSLSHDATARSITVQNSLVVGTS-------------------------------------
C3ZLC7/2969-3342                    ---------VVTFTR-LAQTGNVGDSSITLVKAVDWVVGDDIAITTTSFDIWQTETFKITGVSEDTKTITLNGTLAYKHLGETLTLAD-GQ-TINMAAEVALLTRNVKIIGEDYDELFGESFGARVIVGTFFQDGDQYLG--YGRFENVEFYHTGQEGWIDFYDPRYSLAFLDVGEILDDYTESYIRKNTFHSGFSPAIGVFGTQNLNIEDNVIHHTVGQAMRVWGVDN-KLRRNLVSLIIWPGGYQDRNEPENVDWTAAIEVFEATSIVLDGNVVAGSDRVGFHVDGEACSG--GAAEAWTNNVAHSCMVGVSVFPGDGINPCTRISN--FTVWKNHDYGIYFQAGVTEVVVENLLAADNQVNIFTMLFGPGSTSHRAVAKSMTIRNSHVVG---------------------------------------
W5M5C1/2975-3355                    TLQLHGLPRSVYHTK-LAASAGAGSFNILLEESVDWQVDDDLVITTTSYDTWQTEIRKIAMISADGRNVTLNQSLSYTHIAETVNVSETGQ-QYRLAADVGLLSRNIKIIGQDYPGWYQESFGARVLVGSFSNGVYVYKG--NAQIRNVEFYHTGQEGYQDSFDPRYSVAFLDLGQV--SANDSYVQGCSFHHGFSPAIGVFGTDGMNIDDNVIYFTVGEGIRVWGSNI-KVRRNLVTVAVWPGSYQDREETLNSLWHAAIEVNEGMNIVLQDNIVAGFERVAYHINGEPCPGTFNPVESWHGNEAHGGLYGVYMN-KDGLASCSLIQG--FTVWKCWDYGIYFQTV-MSIQISDVTLVDNGMGVLPIIYTPPSVSHQYSDKTVQIQNSLIV----------------------------------------
#=GC scorecons                      000000000010032043333234223636342556354455455563543646654462245264353565335352632342431507404656976776546654636356243526566665565362232328390057563977956999996354797979598574746024334946445499479766897776446463597776989566363953503645796454776649779272352393575652563558745937994775745579969340053444754945932415413303432226424330062455223454545210122132223335322332232234244462211212222332110000000000000000000000000000000000000000
#=GC scorecons_70                   ___________________________*_*_____*__________*____*_**___*_____*_____*_______*__________*______**_***__**__*_*__*_____*_****__*__*______*_*___*_*_****_******____******_**_*_*_*______*_*____**_***__******____*__********_**___*________**____**_*_****_*_____*__*_*___*___**__*_***_**_*___*****_________*__*__*________________*_______*____________________________________________*_______________________________________________________
#=GC scorecons_80                   _________________________________________________________________________________________*______**_**____________________________________*_*___*___****__*****____******_**___*________*______**_***__*****________*__*_***______*________**____*____****_*_____*__*_________**__*__**_**_____***_*_________*__*__*_____________________________________________________________________________________________________________________________
#=GC scorecons_90                   ________________________________________________________________________________________________*________________________________________*_*_______*__*__*****_____*_*_*_**____________*______**__*____*___________*____***______*_________*_________*__*_______*________________*__**_________**_*____________*__*_____________________________________________________________________________________________________________________________
//