# STOCKHOLM 1.0
#=GF ID 2.130.10.30/FF/000031
#=GF DE PH, RCC1 and FYVE domains-containing protein 1
#=GF AC 2.130.10.30/FF/000031
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 58.326
#=GS Q947D2/464-640      AC Q947D2
#=GS Q947D2/464-640      OS Arabidopsis thaliana
#=GS Q947D2/464-640      DE PH, RCC1 and FYVE domains-containing protein 1
#=GS Q947D2/464-640      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q947D2/464-640      DR GO; GO:0017112; GO:0035091; GO:0070300; 
#=GS Q9SRZ7/467-639      AC Q9SRZ7
#=GS Q9SRZ7/467-639      OS Arabidopsis thaliana
#=GS Q9SRZ7/467-639      DE F12P19.9 protein
#=GS Q9SRZ7/467-639      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9SRZ7/467-639      DR GO; GO:0005773; GO:0005886; 
#=GS F4K0X5/484-653      AC F4K0X5
#=GS F4K0X5/484-653      OS Arabidopsis thaliana
#=GS F4K0X5/484-653      DE Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
#=GS F4K0X5/484-653      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F4K0X5/484-653      DR GO; GO:0005886; 
#=GS A0A178WMI8/464-640  AC A0A178WMI8
#=GS A0A178WMI8/464-640  OS Arabidopsis thaliana
#=GS A0A178WMI8/464-640  DE PRAF1
#=GS A0A178WMI8/464-640  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A1P8BC78/486-657  AC A0A1P8BC78
#=GS A0A1P8BC78/486-657  OS Arabidopsis thaliana
#=GS A0A1P8BC78/486-657  DE Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
#=GS A0A1P8BC78/486-657  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F4K149/489-652      AC F4K149
#=GS F4K149/489-652      OS Arabidopsis thaliana
#=GS F4K149/489-652      DE Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
#=GS F4K149/489-652      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A3P6FWT7/455-631  AC A0A3P6FWT7
#=GS A0A3P6FWT7/455-631  OS Brassica oleracea
#=GS A0A3P6FWT7/455-631  DE Uncharacterized protein
#=GS A0A3P6FWT7/455-631  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; 
#=GS A0A1J3EEK1/469-643  AC A0A1J3EEK1
#=GS A0A1J3EEK1/469-643  OS Noccaea caerulescens
#=GS A0A1J3EEK1/469-643  DE Putative E3 ubiquitin-protein ligase HERC1
#=GS A0A1J3EEK1/469-643  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS V4KVE8/485-651      AC V4KVE8
#=GS V4KVE8/485-651      OS Eutrema salsugineum
#=GS V4KVE8/485-651      DE Uncharacterized protein
#=GS V4KVE8/485-651      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS R0HX99/465-641      AC R0HX99
#=GS R0HX99/465-641      OS Capsella rubella
#=GS R0HX99/465-641      DE Uncharacterized protein
#=GS R0HX99/465-641      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS M4CHL5/446-622      AC M4CHL5
#=GS M4CHL5/446-622      OS Brassica rapa subsp. pekinensis
#=GS M4CHL5/446-622      DE Uncharacterized protein
#=GS M4CHL5/446-622      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS D7KTY5/464-640      AC D7KTY5
#=GS D7KTY5/464-640      OS Arabidopsis lyrata subsp. lyrata
#=GS D7KTY5/464-640      DE Zinc finger protein
#=GS D7KTY5/464-640      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A078FNS1/498-667  AC A0A078FNS1
#=GS A0A078FNS1/498-667  OS Brassica napus
#=GS A0A078FNS1/498-667  DE BnaC09g38280D protein
#=GS A0A078FNS1/498-667  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A0D3CW98/455-631  AC A0A0D3CW98
#=GS A0A0D3CW98/455-631  OS Brassica oleracea var. oleracea
#=GS A0A0D3CW98/455-631  DE Uncharacterized protein
#=GS A0A0D3CW98/455-631  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS M4DGT2/454-626      AC M4DGT2
#=GS M4DGT2/454-626      OS Brassica rapa subsp. pekinensis
#=GS M4DGT2/454-626      DE Uncharacterized protein
#=GS M4DGT2/454-626      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A1J3JVJ2/473-644  AC A0A1J3JVJ2
#=GS A0A1J3JVJ2/473-644  OS Noccaea caerulescens
#=GS A0A1J3JVJ2/473-644  DE Putative E3 ubiquitin-protein ligase HERC1
#=GS A0A1J3JVJ2/473-644  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS A0A0D3EE22/480-651  AC A0A0D3EE22
#=GS A0A0D3EE22/480-651  OS Brassica oleracea var. oleracea
#=GS A0A0D3EE22/480-651  DE Uncharacterized protein
#=GS A0A0D3EE22/480-651  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS D7M4I7/482-653      AC D7M4I7
#=GS D7M4I7/482-653      OS Arabidopsis lyrata subsp. lyrata
#=GS D7M4I7/482-653      DE Ran GTPase binding protein
#=GS D7M4I7/482-653      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GF SQ 18
Q947D2/464-640              ------SNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCST-
Q9SRZ7/467-639              ---NDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISLN--------
F4K0X5/484-653              --MVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRW------------
A0A178WMI8/464-640          ------SNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCST-
A0A1P8BC78/486-657          EVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKW------------
F4K149/489-652              ---VGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV-----------------
A0A3P6FWT7/455-631          ------SNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPVLIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNVQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYVACGSNYTAAICLHKWVSGAEQSQCSS-
A0A1J3EEK1/469-643          --------SSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVLTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKERHVKYIACGSNYTAAICLHKWVSGAEQSQCST-
V4KVE8/485-651              EVMVGSTSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPARVEGKLYKSFVEEIACGAYHVAVLTSKTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV-----------------
R0HX99/465-641              -----QSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCS--
M4CHL5/446-622              ------SNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNVQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALRDRHVKYVACGSNYTAAICLHKWVSGAEQSQCSS-
D7KTY5/464-640              ------SNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCST-
A0A078FNS1/498-667          --MVGSSSSSNCSSGKLFTWGDGDKNRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTLGHVYTVGSPVYGQLGNPHTDGKLPARVEGKLHKSFVEEIACGAYHVAVLTSKTEVYTWGKGSNGRLGHGDADDRSSPTLVESLKDKQVKTIACGSNFTAAVCLHKW------------
A0A0D3CW98/455-631          ------SNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPVLIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNVQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYVACGSNYTAAICLHKWVSGAEQSQCSS-
M4DGT2/454-626              ----------NASSGKLFTWGDGDKNRLGHGDKDARLKPTCVPSLIDYNFHRVACGHSLTVGLTTSGQVFTMGSTVYGQLGSLQTDGKVPCLVEDKLASEFVEEISCGAYHVAVLTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEGLKDRHVKYIACGSSYTAAICLHKWVSGAEQSQCSA-
A0A1J3JVJ2/473-644          ------------SSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVLTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKERHVKYIACGSNYTAAICLHKWVSGAEQSQCSTC
A0A0D3EE22/480-651          EVMVGSSSSSNCSSGKLFTWGDGDKNRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTLGHVYTVGSPVYGQLGNPHTDGKLPARVEGKLHKSFVEEIACGAYHVAVLTSKTEVYTWGKGSNGRLGHGDADDRSSPTLVESLKDKQVKTIACGSNFTAAVCLHKW------------
D7M4I7/482-653              EVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRW------------
#=GC scorecons              0011114356439799999999999599997776779499995697748946779977999697779596979958899997466779574496679455997896797899969996579999999599899799569955978995978759748999686999765665221211111100
#=GC scorecons_70           ____________*************_***********_****_****_**__*********_*****_******_*******__****_*__**_**___*****_*******_***__********_********__**__*****_****_**_************_*______________
#=GC scorecons_80           ____________*************_*******___*_****__*___**___********_*****_*_****_******____***_*__*__**___*****_*******_***__********_********__**__*****_***__**_****_*_***__________________
#=GC scorecons_90           ____________*_***********_****______*_****__*____*____**__***_*___*_*_*_**_******______*____*___*___**_**__*_****_***___*******_**_**_**__**__*_***_*_*__*__****_*_***__________________
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