# STOCKHOLM 1.0
#=GF ID 2.130.10.10/FF/000734
#=GF DE Protein RAE1
#=GF AC 2.130.10.10/FF/000734
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 21.498
#=GS A0A1D6J500/338-612  AC A0A1D6J500
#=GS A0A1D6J500/338-612  OS Zea mays
#=GS A0A1D6J500/338-612  DE Protein RAE1
#=GS A0A1D6J500/338-612  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J4W8/56-334   AC A0A1D6J4W8
#=GS A0A1D6J4W8/56-334   OS Zea mays
#=GS A0A1D6J4W8/56-334   DE Protein RAE1
#=GS A0A1D6J4W8/56-334   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J4Y8/56-334   AC A0A1D6J4Y8
#=GS A0A1D6J4Y8/56-334   OS Zea mays
#=GS A0A1D6J4Y8/56-334   DE Protein RAE1
#=GS A0A1D6J4Y8/56-334   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J4Y4/56-334   AC A0A1D6J4Y4
#=GS A0A1D6J4Y4/56-334   OS Zea mays
#=GS A0A1D6J4Y4/56-334   DE Protein RAE1
#=GS A0A1D6J4Y4/56-334   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS K7TNH0/56-334       AC K7TNH0
#=GS K7TNH0/56-334       OS Zea mays
#=GS K7TNH0/56-334       DE Protein RAE1
#=GS K7TNH0/56-334       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J4Y6/56-334   AC A0A1D6J4Y6
#=GS A0A1D6J4Y6/56-334   OS Zea mays
#=GS A0A1D6J4Y6/56-334   DE Protein RAE1
#=GS A0A1D6J4Y6/56-334   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J4U6/338-612  AC A0A1D6J4U6
#=GS A0A1D6J4U6/338-612  OS Zea mays
#=GS A0A1D6J4U6/338-612  DE Protein RAE1
#=GS A0A1D6J4U6/338-612  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J4W7/56-334   AC A0A1D6J4W7
#=GS A0A1D6J4W7/56-334   OS Zea mays
#=GS A0A1D6J4W7/56-334   DE Protein RAE1
#=GS A0A1D6J4W7/56-334   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J4X1/56-335   AC A0A1D6J4X1
#=GS A0A1D6J4X1/56-335   OS Zea mays
#=GS A0A1D6J4X1/56-335   DE Protein RAE1
#=GS A0A1D6J4X1/56-335   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J4Z3/56-334   AC A0A1D6J4Z3
#=GS A0A1D6J4Z3/56-334   OS Zea mays
#=GS A0A1D6J4Z3/56-334   DE Protein RAE1
#=GS A0A1D6J4Z3/56-334   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J4Y0/55-338   AC A0A1D6J4Y0
#=GS A0A1D6J4Y0/55-338   OS Zea mays
#=GS A0A1D6J4Y0/55-338   DE Protein RAE1
#=GS A0A1D6J4Y0/55-338   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J4X8/56-334   AC A0A1D6J4X8
#=GS A0A1D6J4X8/56-334   OS Zea mays
#=GS A0A1D6J4X8/56-334   DE Protein RAE1
#=GS A0A1D6J4X8/56-334   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J4V9/56-334   AC A0A1D6J4V9
#=GS A0A1D6J4V9/56-334   OS Zea mays
#=GS A0A1D6J4V9/56-334   DE Protein RAE1
#=GS A0A1D6J4V9/56-334   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J4Z6/56-334   AC A0A1D6J4Z6
#=GS A0A1D6J4Z6/56-334   OS Zea mays
#=GS A0A1D6J4Z6/56-334   DE Protein RAE1
#=GS A0A1D6J4Z6/56-334   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J4Z4/55-338   AC A0A1D6J4Z4
#=GS A0A1D6J4Z4/55-338   OS Zea mays
#=GS A0A1D6J4Z4/55-338   DE Protein RAE1
#=GS A0A1D6J4Z4/55-338   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J4X9/56-334   AC A0A1D6J4X9
#=GS A0A1D6J4X9/56-334   OS Zea mays
#=GS A0A1D6J4X9/56-334   DE Protein RAE1
#=GS A0A1D6J4X9/56-334   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6J502/56-334   AC A0A1D6J502
#=GS A0A1D6J502/56-334   OS Zea mays
#=GS A0A1D6J502/56-334   DE Protein RAE1
#=GS A0A1D6J502/56-334   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6EEH3/55-316   AC A0A1D6EEH3
#=GS A0A1D6EEH3/55-316   OS Zea mays
#=GS A0A1D6EEH3/55-316   DE Transducin family protein / WD-40 repeat family protein
#=GS A0A1D6EEH3/55-316   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GF SQ 18
A0A1D6J500/338-612          -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSS--------
A0A1D6J4W8/56-334           -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIV----
A0A1D6J4Y8/56-334           -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIV----
A0A1D6J4Y4/56-334           -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIV----
K7TNH0/56-334               -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIV----
A0A1D6J4Y6/56-334           -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIV----
A0A1D6J4U6/338-612          -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSS--------
A0A1D6J4W7/56-334           -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIV----
A0A1D6J4X1/56-335           -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIVQ---
A0A1D6J4Z3/56-334           -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIV----
A0A1D6J4Y0/55-338           ----------------------------REVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIVQQRS
A0A1D6J4X8/56-334           -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIV----
A0A1D6J4V9/56-334           -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIV----
A0A1D6J4Z6/56-334           -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIV----
A0A1D6J4Z4/55-338           ----------------------------REVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIVQQRS
A0A1D6J4X9/56-334           -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIV----
A0A1D6J502/56-334           -----------------------------EVSPRLKHHAKRMWNESPKYDPDSIELR--SADAKLDIFSWAESQSLHSWSAKYCPLLPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGKCLKVLTGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGSGEILAVASGHKLYIWNYNKRDGTSVPAIILKTRRSLRAVHFHPRGAPYLLTAEVNNIESADSPLTLARSSGYLNYPSALLVTNTNSRFCTLPESNVVSPCLLWPAYLRDGGILHVLGNDSSSTIV----
A0A1D6EEH3/55-316           DMKMPFIQTTVSKRANHFDLNIFHLLTQREVLPRTKHHAKRIWNNSPKYDPHLIELRFSDADAKLGILSWAESLSLHRWSAKYCPLLPPPRSTIAAAFSPDGKSLASTHGDHTVKIMDCHTGKCVKVLSGHRRTPWVVRYHPLHSDILASGSLDHEVRLWDANTSDCIGSQDFHRPIASIAFHGRGEILAVASGHKLYIWNYNKRDDASVPTIILRTRRSLRAVHFHPHGAPYLLTAEVNNIESADSPLTLARSSGYSNYPS----------------------------------------------------
#=GC scorecons              00000000000000000000000000000994995999999699599999954999900599999596999994999599999999999999999999999995999999999999699699996999599999999999999999999999999999999999999999999999999999995999999999999999999999569996999699999999999969999999999999999999999999999499993333333333333333333333333333333333333333333322220000
#=GC scorecons_70           _____________________________**_**_*********_******__****___*****_*_*****_***_*************************_********************_***_*******************************************************_*********************__***_****************_****************************_****____________________________________________________
#=GC scorecons_80           _____________________________**_**_******_**_******__****___*****_*_*****_***_*************************_************_**_****_***_*******************************************************_*********************__***_***_************_****************************_****____________________________________________________
#=GC scorecons_90           _____________________________**_**_******_**_******__****___*****_*_*****_***_*************************_************_**_****_***_*******************************************************_*********************__***_***_************_****************************_****____________________________________________________
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