# STOCKHOLM 1.0 #=GF ID 2.130.10.10/FF/000675 #=GF DE Intraflagellar transport 140 #=GF AC 2.130.10.10/FF/000675 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 75.356 #=GS E9PY46/5-160 AC E9PY46 #=GS E9PY46/5-160 OS Mus musculus #=GS E9PY46/5-160 DE Intraflagellar transport protein 140 homolog #=GS E9PY46/5-160 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; #=GS E9PY46/5-160 DR GO; GO:0001750; GO:0005813; GO:0005929; GO:0005930; GO:0007368; GO:0007507; GO:0008589; GO:0021532; GO:0030991; GO:0031076; GO:0032391; GO:0035108; GO:0035721; GO:0035845; GO:0036064; GO:0042073; GO:0042733; GO:0048701; GO:0048705; GO:0060041; GO:0060271; GO:0061512; GO:0072001; GO:0097730; GO:1902017; GO:1905515; GO:1990403; #=GS A0A3B2W3F6/5-160 AC A0A3B2W3F6 #=GS A0A3B2W3F6/5-160 OS Mus musculus #=GS A0A3B2W3F6/5-160 DE Intraflagellar transport protein 140 homolog #=GS A0A3B2W3F6/5-160 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; #=GS A0A3B3H635/20-177 AC A0A3B3H635 #=GS A0A3B3H635/20-177 OS Oryzias latipes #=GS A0A3B3H635/20-177 DE Uncharacterized protein #=GS A0A3B3H635/20-177 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GS F1P2U6/15-155 AC F1P2U6 #=GS F1P2U6/15-155 OS Gallus gallus #=GS F1P2U6/15-155 DE Uncharacterized protein #=GS F1P2U6/15-155 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; #=GS F1RG13/12-160 AC F1RG13 #=GS F1RG13/12-160 OS Sus scrofa #=GS F1RG13/12-160 DE Uncharacterized protein #=GS F1RG13/12-160 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Suina; Suidae; Sus; Sus scrofa; #=GS W5M5V5/5-156 AC W5M5V5 #=GS W5M5V5/5-156 OS Lepisosteus oculatus #=GS W5M5V5/5-156 DE Uncharacterized protein #=GS W5M5V5/5-156 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; #=GS F6Q6W1/5-145 AC F6Q6W1 #=GS F6Q6W1/5-145 OS Macaca mulatta #=GS F6Q6W1/5-145 DE Uncharacterized protein #=GS F6Q6W1/5-145 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; #=GS M3WDN5/8-189 AC M3WDN5 #=GS M3WDN5/8-189 OS Felis catus #=GS M3WDN5/8-189 DE Uncharacterized protein #=GS M3WDN5/8-189 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; #=GS A0A2K6SP22/13-159 AC A0A2K6SP22 #=GS A0A2K6SP22/13-159 OS Saimiri boliviensis boliviensis #=GS A0A2K6SP22/13-159 DE Intraflagellar transport 140 #=GS A0A2K6SP22/13-159 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri; Saimiri boliviensis; Saimiri boliviensis boliviensis; #=GS H2QAA4/8-162 AC H2QAA4 #=GS H2QAA4/8-162 OS Pan troglodytes #=GS H2QAA4/8-162 DE Intraflagellar transport 140 #=GS H2QAA4/8-162 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; #=GS G1RBQ5/12-159 AC G1RBQ5 #=GS G1RBQ5/12-159 OS Nomascus leucogenys #=GS G1RBQ5/12-159 DE Uncharacterized protein #=GS G1RBQ5/12-159 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; #=GS A0A2K6MBF8/10-161 AC A0A2K6MBF8 #=GS A0A2K6MBF8/10-161 OS Rhinopithecus bieti #=GS A0A2K6MBF8/10-161 DE Uncharacterized protein #=GS A0A2K6MBF8/10-161 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus bieti; #=GS H2NPP9/14-158 AC H2NPP9 #=GS H2NPP9/14-158 OS Pongo abelii #=GS H2NPP9/14-158 DE IFT140 isoform 2 #=GS H2NPP9/14-158 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; #=GS A0A2K5MHL8/10-163 AC A0A2K5MHL8 #=GS A0A2K5MHL8/10-163 OS Cercocebus atys #=GS A0A2K5MHL8/10-163 DE Uncharacterized protein #=GS A0A2K5MHL8/10-163 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; #=GS A0A0D9RGL3/13-156 AC A0A0D9RGL3 #=GS A0A0D9RGL3/13-156 OS Chlorocebus sabaeus #=GS A0A0D9RGL3/13-156 DE Uncharacterized protein #=GS A0A0D9RGL3/13-156 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus; Chlorocebus sabaeus; #=GS G3QSX5/15-159 AC G3QSX5 #=GS G3QSX5/15-159 OS Gorilla gorilla gorilla #=GS G3QSX5/15-159 DE Intraflagellar transport 140 #=GS G3QSX5/15-159 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; #=GS A0A2K5JFA6/13-157 AC A0A2K5JFA6 #=GS A0A2K5JFA6/13-157 OS Colobus angolensis palliatus #=GS A0A2K5JFA6/13-157 DE Uncharacterized protein #=GS A0A2K5JFA6/13-157 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus; Colobus angolensis; Colobus angolensis palliatus; #=GS A0A2K5WMZ1/14-157 AC A0A2K5WMZ1 #=GS A0A2K5WMZ1/14-157 OS Macaca fascicularis #=GS A0A2K5WMZ1/14-157 DE Uncharacterized protein #=GS A0A2K5WMZ1/14-157 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; #=GS H2LT88/7-158 AC H2LT88 #=GS H2LT88/7-158 OS Oryzias latipes #=GS H2LT88/7-158 DE Uncharacterized protein #=GS H2LT88/7-158 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GS K7ANH9/8-162 AC K7ANH9 #=GS K7ANH9/8-162 OS Pan troglodytes #=GS K7ANH9/8-162 DE IFT140 isoform 1 #=GS K7ANH9/8-162 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; #=GS A0A2K6MBF5/10-161 AC A0A2K6MBF5 #=GS A0A2K6MBF5/10-161 OS Rhinopithecus bieti #=GS A0A2K6MBF5/10-161 DE Uncharacterized protein #=GS A0A2K6MBF5/10-161 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus bieti; #=GF SQ 21 E9PY46/5-160 FDHRIKAPDTPSSPSHITWHPTHPFLAVASISPSSGGNVDIYLEQGEPVPDTHIERSFQATSLCWHPTRLILAIGWETGEVIMFNKQDKEQHTVPLPHTTDIAILSWSTSGSCLVSGDKLGVLLLWRLDQRGRVQGTPLLKHEYGKALTHCIFRLP----------------------------- A0A3B2W3F6/5-160 FDHRIKAPDTPSSPSHITWHPTHPFLAVASISPSSGGNVDIYLEQGEPVPDTHIERSFQATSLCWHPTRLILAIGWETGEVIMFNKQDKEQHTVPLPHTTDIAILSWSTSGSCLVSGDKLGVLLLWRLDQRGRVQGTPLLKHEYGKALTHCIFRLP----------------------------- A0A3B3H635/20-177 ---------------QLTWHSTLPVLAVASHSPSAGGNVDLYLQQGEHVESCHVERPHQPTVLHWHPLKPVLALGWENGEVVLLMHPSGDQTVLPSLHTASITLLEWSSSGSRLVTGDQTGVLAVWKVDARGRLQGNHLVKHEYNKPLTYCLFRPALPGIDVAKLARASVSGD------------ F1P2U6/15-155 ----------VASPSLITWHSVHPLLAVASISTASGGCVDIYLEQGEHEPDAHIERSFQVTSLSWHPSRLILAAGWETGEVVILNKQDKELHTVPPNHNAKITILNWSSNGSRLVSGDRHGILFLWRMDQRGRVQGPPMLKHEYGKCLSHC---------------------------------- F1RG13/12-160 -------PDAAGSPSHVCWHPVHPFLAVASVNPALGGSVDIYLEQGECVPNTHMERASRVTILSWHPTRPVLAVGWETGEAVIFNKQDKEQHAVPPTHTADLTVLTWSPSGNYLASGDRLGVLILWRLDQRGRVQGAPLLKHDYGQPLTHCIFRRP----------------------------- W5M5V5/5-156 FDHHIEAPDSSGAPCEIAWHSSQPVLAVASVSPATGGSVDFYLQQGEHVGNSHVERPFQPTVLHWHPSKMVLAVGWESGEVLLQTYPNGEQTTLPSTHSASITLLEWSTNGSHLITGDQLGVLALWKVDARGRLQGSPQVKHEYGKPLT-C-------GV------------------------- F6Q6W1/5-145 FDHQIEAPDAAGSPSHISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVERPFRVASLCWHPTRPVLAMGWETGEVTVFNKQDKEQHTTPPTHTADVAVLSWSPSGNCLLSGDRLGVLLLWRLDQRGRVQGTPLLK-------------------------------------------- M3WDN5/8-189 ---RVEAPDSVGSPSHIHWHPVHPFLAVASVSPTSGGSVDVYLEQGEHAPDTHIERSFRVTSLCWHPTRMILAVGWETGEVTVFNKQDKEQHAVPPTHTSDITVLKWSPNGNCLVSGDRLGVLLLWRLDQRGRVQGPPLLKHDYGKHLTHCIFRLPPPGQDLIQLAKAAVSGDERALDMFNWRKS A0A2K6SP22/13-159 --------DAAGSPSHISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVERPFRVASLCWHPTRLVLAVGWETGEVTVFNKQDKEQHPVSPTHTADITVLSWSPSGNCLLSGDRLGVLLLWRLDQRGRVQGMPLLKHEYGKQLTHCIFRV------------------------------ H2QAA4/8-162 ---QIEASDAAGSPSYISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVERPFRVASLCWHPTRLVLAVGWEAGEVTVFNKQDKEQHTMPLTHTADITVLNWSPSGNCLLSGDRLGVLLLWRLDQRGRVQGTPLLKHEYGKHLTHCIFRLPPP--------------------------- G1RBQ5/12-159 -------PDAAGSPSHISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVERPFRVASLCWHPTRLVLALGWETGEVTVFNKQDKEQHTMPLTHTADITVLNWSPSGNCLLSGDRLGVLLLWRLDQRGRVRGTPLLKLEYGKHLTHCIFRL------------------------------ A0A2K6MBF8/10-161 -----EAPDAAGSPSHISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVERPFRVASLCWHPTRLVLAVGWETGEVTVFNKQDKEQHTMPPTHTADITVLSWSPSGNCLLSGDRLGVLLLWRLDQRGRVQGTTLLKHEYGKPLTHCIFRLPA---------------------------- H2NPP9/14-158 ---------AAGSPSHISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVERPFRVASLCWHPTRLVLALGWETGEVTVFNKQDKEQHTMPLTHTANITVLNWSPNGNCLLSGDRLGVLLLWRLDQRGRVQGTPLLKHEYGKHLTHCIFR------------------------------- A0A2K5MHL8/10-163 -----EAPDAAGSPSHISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVERPFRVASLCWHPTRLVLAMGWETGEVTVFNKQDKEQHTMPPTHTADITVLSWSPSGNCLLSGDRLGVLLLWRLDQRGRVQGTPLLKHEYGKPLTHCIFRLPPPG-------------------------- A0A0D9RGL3/13-156 --------DAAGSPSHISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVERPFRVASLCWHPTRLVLAVGWETGEVTVFNKQDKEQHTMPPTHTADITVLSWSPSGNCLLSGDRLGVLLLWRLDQRGRVQGTPLLKHEYGKPLTHCI--------------------------------- G3QSX5/15-159 ----------AGSPSYISWHPVHPFLAVAYISTTSAGSVDIYLEQGECVPDTHVERPFRVASLCWHPTRLVLAVGWETGEVTVFNKQDKEQHTMPLTHTADITVLSWSPSGNCLLSGDRLGVLLLWRLDQRGRVQGTPLLKHEYGKHLTHCIFRL------------------------------ A0A2K5JFA6/13-157 --------DAAGSPSHISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVERPFRVASLCWHPTRLVLAVGWETGEVTVFNKQDKEQHTMPPTHTADITVLIWSPSGNCLLSGDRLGVLLLWRLDQRGRVQGTPLLKHEYGKPLTHCIF-------------------------------- A0A2K5WMZ1/14-157 ---------AAGSPSHISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVERPFRVASLCWHPTRLVLAMGWETGEVTVFNKQDKEQHTMPPTHTADITVLSWSPSGNCLLSGDRLGVLLLWRLDQRGRVQGTPLLKHEYGKPLTHCIF-------------------------------- H2LT88/7-158 --HRIDAPENGDVPSQLTWHSTLPVLAVASHSPSAGGNVDLYLQQGEHVESCHVERPHQPTVLHWHPLKPVLALGWENGEVVLLMHPSGDQTVLPSLHTASITLLEWSSSGSRLVTGDQTGVLAVWKVDARGRLQGNHLVKHEYNKPLTYCLFR------------------------------- K7ANH9/8-162 ---QIEASDAAGSPSYISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVERPFRVASLCWHPTRLVLAVGWEAGEVTVFNKQDKEQHTMPLTHTADITVLNWSPSGNCLLSGDRLGVLLLWRLDQRGRVQGTPLLKHEYGKHLTHCIFRLPPP--------------------------- A0A2K6MBF5/10-161 -----EAPDAAGSPSHISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVERPFRVASLCWHPTRLVLAVGWETGEVTVFNKQDKEQHTMPPTHTADITVLSWSPSGNCLLSGDRLGVLLLWRLDQRGRVQGTTLLKHEYGKPLTHCIFRLPA---------------------------- #=GC scorecons 00011123434557657599656969999558656596996997999576659799666565959995757995999699856666666786658459775876949956965956996698957976969997895677977867487584541100000000000000000000000000000 #=GC scorecons_70 _____________**_*_***__*_****__*____*_*********_*___*******_*_*_***_*_***_***_***____*******__*__***_****_**_**__*_****_***_************_*********_**_*__________________________________ #=GC scorecons_80 _____________*__*_**___*_****__*____*_**_**_***_*___****______*_***_*_***_***_***________**___*__***_**_*_**__*__*__**__***_***_*_***_**__*_****_*_**_*__________________________________ #=GC scorecons_90 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