# STOCKHOLM 1.0
#=GF ID 2.130.10.10/FF/001158
#=GF DE Semaphorin-4E
#=GF AC 2.130.10.10/FF/001158
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 56.569
#=GS F1QCZ2/21-496      AC F1QCZ2
#=GS F1QCZ2/21-496      OS Danio rerio
#=GS F1QCZ2/21-496      DE Semaphorin-4E
#=GS F1QCZ2/21-496      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS W5MHU8/25-500      AC W5MHU8
#=GS W5MHU8/25-500      OS Lepisosteus oculatus
#=GS W5MHU8/25-500      DE Uncharacterized protein
#=GS W5MHU8/25-500      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS H2MK68/28-500      AC H2MK68
#=GS H2MK68/28-500      OS Oryzias latipes
#=GS H2MK68/28-500      DE Uncharacterized protein
#=GS H2MK68/28-500      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A3B3CYU8/28-500  AC A0A3B3CYU8
#=GS A0A3B3CYU8/28-500  OS Oryzias melastigma
#=GS A0A3B3CYU8/28-500  DE Uncharacterized protein
#=GS A0A3B3CYU8/28-500  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias melastigma; 
#=GS Q1MT68/25-500      AC Q1MT68
#=GS Q1MT68/25-500      OS Danio rerio
#=GS Q1MT68/25-500      DE Semaphorin 4e
#=GS Q1MT68/25-500      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS Q9YHX4/25-500      AC Q9YHX4
#=GS Q9YHX4/25-500      OS Danio rerio
#=GS Q9YHX4/25-500      DE Semaphorin-4E
#=GS Q9YHX4/25-500      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS F1QNC4/25-500      AC F1QNC4
#=GS F1QNC4/25-500      OS Danio rerio
#=GS F1QNC4/25-500      DE Semaphorin-4E
#=GS F1QNC4/25-500      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS M9MMA2/12-482      AC M9MMA2
#=GS M9MMA2/12-482      OS Danio rerio
#=GS M9MMA2/12-482      DE Si:ch211-129c21.1
#=GS M9MMA2/12-482      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS A0A3P9MNG9/27-500  AC A0A3P9MNG9
#=GS A0A3P9MNG9/27-500  OS Oryzias latipes
#=GS A0A3P9MNG9/27-500  DE Si:ch211-129c21.1
#=GS A0A3P9MNG9/27-500  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A3P9I8B6/28-500  AC A0A3P9I8B6
#=GS A0A3P9I8B6/28-500  OS Oryzias latipes
#=GS A0A3P9I8B6/28-500  DE Si:ch211-129c21.1
#=GS A0A3P9I8B6/28-500  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GF SQ 10
F1QCZ2/21-496              S-TLDSLPRKTVPIGSNGGRLFREEGIWNYTTMLLRDDLNLLILGAREAIFALDLDDITIKKAMLKWEVTRDQQNDCSNKGKDATNDCKNYIRILHKKDDGRMYVCGTKAFNPTCGYLSYADGKLTLEILQEDTKGKCPFDPFQRYTSAMVDGAYYSATSMNFRGSEPVMMRSTE-ESIRTEFTSTWLSEPNFIHMAHIPEGQSNPDGDDDKIYLFFSETAVEYESYTKVDVSRVARVCKGDLGGQRTLQKKWTSFLKARFDCQVPNTNLPLLVQDVFHLCPDDWTTCVFYAVFTPQSDSS-QYSAVCSYKIEDIKTVFSKGKFKAPFNVETSFVKWVMYSGELPDPRPGACIDNHAREKGITKSLELPDKTLQFVKDKPLMDQAVT--AEQPLLVKRGAAFTRIVVTTATALNGTSHQVMFIGTKSGSVLKAVNYNGEMVIMEEIQLFEPSEPIKILRLSSSKKQLYVGSEVGVVQLSIS
W5MHU8/25-500              P---HCIPRKSVLYHNGNIKLFREEGISNYTTMLLREDLGLLIVGAREAIYALDMGDIFRKKSNVTWQVISDKQRDCVNKGKDAETECRNYIRTLHKIDDDNMYVCGTDAFSPTCDVLVYRDGKLQLKNKKEEGKGKCPFDPFQRYSSVMVDGDLYCATAINFLGSEPAVLRSSP-SALRTEFKSSWLNEPNFVYMDVVPESRGNAEGDDDKVYLFFSESAVEYDFFSKLPVSRVARVCKGDLGGQRTLQKKWTSFLKARLDCSAPGHSLPFVVQDVFLLHSADWRESIFYAVFVPQSGLL-DVSAVCAYRVADVSQVFSHGKYKTPVTVESSHVKWVMYSGEVPVPRPGACINNATRAMGMQQSLDLPDKTLQFIRDRPLMDDAVAPLGGQPQLVKKGAQLTRIAVDRVTVLDGRSYHVMFIGTVNGYLQKAVNFDGEMFIIEEVQLFHPPEPIKTMRLSAPKGQLYVGSESGVVQVPLS
H2MK68/28-500              ------VPRNTI-LHPNDLKVFREDNIFNYTTMQLRDDLGVVLIGAREAIFALDINNISTKKSWVYWPVTEVKQTDCTYKGKQAEVECRNYIRTLHTINDTTIYVCGTYAFSPVCDYLTFANGQLLLKGKPEEGKGKCPFDPFQRYSSLMVGSDLYSATSINFLGSEPVILRSSSSAALRSDFKYFWLNEPNFVFMDIVGESLDSPDGDDDKVYFIFSENAVEYDFYTKVKVSRVARVCKGDMGGQRTLQRKWTSFLKARLDCSLPEPSLPLIVQDVFLMKHNDWRKSVFYGIFTPQSGLS-QVSAVCAYSISDIRNIFNEGKFKTRAAVESSQDKWVMYTGEVPVPRPGACINNVARKMGVNESRQLPDKTLQFVRDRPLMDDAVSPVTGRPLLLKKGPLLTRIVVDSVTALNQQTYHVMFIGTENGFIQKAVNYAGEMLIIEEIQVLESPEPVGILRLSSSKGQLYAGSDSSVIQMPVS
A0A3B3CYU8/28-500          ------VPRNTI-LHPNDLKVFREDNIYNYTTMLLRDDLGVVLLGAREAIFALDINNISTRKSGVYWPVTEEKQRECTYKGKQAEVECRNYIRTLHIINDTTVYVCGTYAFSPICDYLTFANGQLLLKGKQEEGKGKCPFDPFQRYSSLMVGNDLYSATSINFLGSEPVILRSSGLVALRSDFKKIWLNEPNFVFMDIVGESVDSPDGDDDKVYLFFSENAVEYDFYTKVKVSRVARVCKGDMGGQRTLQRKWTSFLKARLDCSLPEPSLPLIVQDVFLMKHNDWRKGVFYGIFTPQSGLS-QVSAVCAYSISDIRNIFNGGKFKTRVAVESSQDKYVMYSGEVPVPRPGACINDVARKMGVNESRQLPDKTLQFVRDRPLMDDAVSPVTGRPLLLKSGPLLTRIVVDSVTALNQQKYHVMFIGTENGFIQKAVNYAGEMFIIEEIQVVDSPEPIGILRLSSSKGHLYAGSDSSVIQMPVS
Q1MT68/25-500              S-TLDSLPRKTVPIGSNGGRLFREEGIWNYTTMLLRDDLNLLILGAREAIFALDLDDITIKKAMLKWEVTRDQQNDCSNKGKDATNDCKNYIRILHKKNDGRMYVCGTKAFNPTCGYLSYADGKLTLEILQEDTKGKCPFDPFQRYTSAMVDGAYYSATSMNFRGSEPVMMRSTE-ESIRTEFTSTWLSEPNFIHMAHIPEGQSNPDGDDDKIYLFFSETAVEYESYTKVDVSRVARVCKGDLGGQRTLQKKWTSFLKARLDCQVPNTNLPLLVQDVFHLCPDDWTTCVFYAVFTPQSDSS-QYSAVCSYKIEDIKTVFSKGKFKAPFNVETSFVKWVMYSGELPDPRPGACIDNHAREKGITKSLELPDKTLQFVKDKPLMDQAVT--AEQPLLVKRGAAFTRIVVTTATALNGTSHQVMFIGTKSGSVLKAVNYNGEMVIMEEIQLFDPSEPIKILRLSSSKKQLYVGSEVGVVQLSIS
Q9YHX4/25-500              S-TLDSLPRKTVPIGSNGGRLFREEGIWNYTTMLLRDDLNLLILGAREAIFALDLDDITIKKAMLKWEVTRDQQNDCSNKGKDATNDCKNYIRILHKKNDGRMYVCGTKAFNPTCGYLSYADGKLTLEILQEDTKGKCPFDPFQRYTSAMVDGAYYSATSMNFRGSEPVMMRSTE-ESIRTEFTSTWLSEPNFIHMAHIPEGQSNPDGDDDKIYLFFSETAVEYESYTKVDVSRVARVCKGDLGGQRTLQKKWTSFLKARLDCQVPNTNLPLLVQDVFHLCPDDWTTCVFYAVFTPQSDSS-QYSAVCSYKIEDIKTVFSKGKFKAPFNVETSFVKWVMYSGELPDPRPGACIDNHAREKGITKSLELPDKTLQFVKDKPLMDQAVT--AEQPLLVKRGAAFTRIVVTTATALNGTSHQVMFIGTKSGSVLKAVNYNGEMVIMEEIQLFDPSEPIKILRLSSSKKQLYVGSEVGVVQLSIS
F1QNC4/25-500              S-TLDSLPRKTVPIGSNGGRLFREEGIWNYTTMLLRDDLNLLILGAREAIFALDLDDITIKKAMLKWEVTRDQQNDCSNKGKDATNDCKNYIRILHKKDDGRMYVCGTKAFNPTCGYLSYADGKLTLEILQEDTKGKCPFDPFQRYTSAMVDGAYYSATSMNFRGSEPVMMRSTE-ESIRTEFTSTWLSEPNFIHMAHIPEGQSNPDGDDDKIYLFFSETAVEYESYTKVDVSRVARVCKGDLGGQRTLQKKWTSFLKARFDCQVPNTNLPLLVQDVFHLCPDDWTTCVFYAVFTPQSDSS-QYSAVCSYKIEDIKTVFSKGKFKAPFNVETSFVKWVMYSGELPDPRPGACIDNHAREKGITKSLELPDKTLQFVKDKPLMDQAVT--AEQPLLVKRGAAFTRIVVTTATALNGTSHQVMFIGTKSGSVLKAVNYNGEMVIMEEIQLFEPSEPIKILRLSSSKKQLYVGSEVGVVQLSIS
M9MMA2/12-482              RHLLKC-------VSDNHAITFKEQGIWNYSTMLIREDLGLLVLGAREAVFALDINDISVSRSKVLWKVTEEKQKECTSKGKHPDIDCHNYIRMLHQMNDSVMYICGTNAFSPTCDYITYDNGQLQLEGKQEDGRGKCPFDPFQRSSSVMVDQDLYSATSLNFLGSEPVILRTSP-ITLRTLLKSSWLNEPNFIYMDAVPESEDSPEGDDDKIYMFFSENAIEYDFYNKLVVSRVARVCKGDMGGLRTLQRKWTSFLKARLDCSVPEPSLPYVIQDVFHVRHQKWRKSVFYAIFTSQSSSTDQSSAVCAYNVTDISNVFSRGKFKTEVAVEMSDVKWVTYSGDLPVPRPGDCINNAARTSGIKSSMNIPDKTLQFIRDRPLMDDAVHPITGKPLLLKRGPLLTRLVVDMVTAADGQSYPMMFVGTANGYVQKAVNYDGEMHIIEEVKLFESEEAIDVLRLH--QNQLYAGSASGVVQMPVS
A0A3P9MNG9/27-500          -----VVPRNTI-LHPNDLKVFREDNIFNYTTMQLRDDLGVVLIGAREAIFALDINNISTKISWVYWPVTEVKQMDCTYKGKQAEVECRNYIRTLHTINDTTIYVCGTYAFSPVCDYLTFANGQLLLKGKPEEGKGKCPFDPFQRYSSLMVGSDLYSATSINFLGSEPVILRSSSSAALRSDFKYFWLNEPNFIFMDIVGESLDSPDGDDDKVYFIFSENAVEYDFYTKVKVSRVARVCKGDMGGQRTLQRKWTSFLKARLDCSLPEPSLPLIVQDVFLMKHNDWRKSVFYGIFTPQSGLS-QVSAVCAYSISDIRNIFNEGKFKTRAAVESSQDKWVMYTGEVPVPRPGACINNVARKMGVNESRQLPDKTLQFVRDRPLMDDAVSPVTGRPLLLKKGPLLTRIVVDSVTALNQQTYHVMFIGTENGFIQKAVNYAGEMLIIEEIQVLESPEPVGILRLSSSKGQLYAGSDSSVIQMPVS
A0A3P9I8B6/28-500          ------VPRNTI-LHPNDLKVFREDNIFNYTTMQLRGDMGVVLLGAREAIFALDINNISTKKSWVYWPVTKDKQRDCTYKGKQAEVECRNYIRTLHTINDTTIYVCGTYAFSPVCDYLTFANGQLLLNGKPEEGKGKCPFDPFQRYSSLMVGSDLYSATSINFLGSEPVILRSSSSAALRSDFKYFWLNEPNFIFMDIVGESLDSPDGDDDKVYFIFSETAVEYDFYTKVKVSRVARVCKGDMGGQRTLQRKWTSFLKARLDCSLPEPSLPLIVQDVFLMKHNDWRKSVFYGIFTPQSGLS-QVSAVCAYSISDIRNIFNEGKFKTRAAVESSQDKWVMYTGEVPVPRPGACINNVARKMGVNESRQLPDKTLQFVRDRPLMDDAVSPETGRPLLLKKGPLLTRIVVDSVTALNQQTYHVMFIGTENGFIQKAVNYAGEMLIIEEIQVLESPESVGILRLSSSKGQLYAGSDSSVIQMPVS
#=GC scorecons             1012124664551444743559896594997995796985665699999889995569546662639497456947954999575469699995994469446989993996959677575696949544596589999999999769499645597997699499997669764035696575539969999759537596355779999969669995989975869639999999999969979999699999999979955955699658999946454795458996697799546074999969474985579649989644599593497979698694999979968379449644945799999997797999959943156597969695469977954697765457579989946946599998499949699776665596746899755748995995569796669
#=GC scorecons_70          _______**_______*____***__*_*****_*****_**_***********__**__**__*_*_**__**_**__***_*__**_****_**__**__******_**_*_*_**_*_****_*____**_************_*_**____*****_**_*****_***_____**__*___**_*****_*__*_*____*********_****_*****_****_********************************__*___***_*****_____**___***_******____*_****_*_*_**__**__*****___**_*__**********_*********_**__**__*__****************_**______*****_*__******___****___*_******__*_*_*****_***_*******____***_*****__*_***_**___***__**
#=GC scorecons_80          ________________*____***__*_*****_**_**_____**********___*________*_**___*_**__***_*___*_****_**___*___*****_**_*_*__*_*__*_*_*____*__************_*_**____*****_**_*****__**______*__*___**_*****_*____*____*******_*__***_****__*_*__***********_**_****_************__*___**__*****_____**___***__*****____*_****_*_*_**___*__****____**_*__*****_**_*_*******_*_**__*___*__*********_*_****_**______***_*_*___*****___***______******__*___*****_***_*_****_____*_*__****__*_***_**___*_*___*
#=GC scorecons_90          _____________________*_*__*_**_**__*_**_____*****_****___*________*_*____*__*__***_____*_****_**___*___*_***_**_*_*_______*_*_*____*___**********__*_**____*_**__**_****___*_______*______**_****__*____*______*****_*__***_*_**__*_*__***********_**_****_*********_**__*___**___****______*___***__*__**______****_*___**___*__****____**_*__*_*_*_*__*_****_**____*__*___*___*******__*_****_**______*_*_*_*___**__*___*_________**_**__*___*****_***_*_**_______*_____**_____***_**___*_*___*
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