# STOCKHOLM 1.0
#=GF ID 2.130.10.10/FF/001152
#=GF DE Cleavage and Polyadenylation Factor
#=GF AC 2.130.10.10/FF/001152
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 68.850
#=GS Q54XS9/159-314     AC Q54XS9
#=GS Q54XS9/159-314     OS Dictyostelium discoideum
#=GS Q54XS9/159-314     DE Uncharacterized protein
#=GS Q54XS9/159-314     DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS Q54XS9/159-314     DR GO; GO:0003723; 
#=GS Q19864/90-256      AC Q19864
#=GS Q19864/90-256      OS Caenorhabditis elegans
#=GS Q19864/90-256      DE Cleavage and Polyadenylation Factor
#=GS Q19864/90-256      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A7SVS3/85-254      AC A7SVS3
#=GS A7SVS3/85-254      OS Nematostella vectensis
#=GS A7SVS3/85-254      DE Predicted protein
#=GS A7SVS3/85-254      DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; 
#=GS F0ZZM4/123-280     AC F0ZZM4
#=GS F0ZZM4/123-280     OS Dictyostelium purpureum
#=GS F0ZZM4/123-280     DE Uncharacterized protein
#=GS F0ZZM4/123-280     DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; 
#=GS H3FG25/13-179      AC H3FG25
#=GS H3FG25/13-179      OS Pristionchus pacificus
#=GS H3FG25/13-179      DE Uncharacterized protein
#=GS H3FG25/13-179      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A2G5UYA5/57-256  AC A0A2G5UYA5
#=GS A0A2G5UYA5/57-256  OS Caenorhabditis nigoni
#=GS A0A2G5UYA5/57-256  DE Uncharacterized protein
#=GS A0A2G5UYA5/57-256  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8WNM2/69-271      AC A8WNM2
#=GS A8WNM2/69-271      OS Caenorhabditis briggsae
#=GS A8WNM2/69-271      DE Protein CBR-CPF-1
#=GS A8WNM2/69-271      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS E3LGD2/90-257      AC E3LGD2
#=GS E3LGD2/90-257      OS Caenorhabditis remanei
#=GS E3LGD2/90-257      DE CRE-CPF-1 protein
#=GS E3LGD2/90-257      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS G0PES4/92-253      AC G0PES4
#=GS G0PES4/92-253      OS Caenorhabditis brenneri
#=GS G0PES4/92-253      DE Uncharacterized protein
#=GS G0PES4/92-253      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS A0A1I7TA56/92-255  AC A0A1I7TA56
#=GS A0A1I7TA56/92-255  OS Caenorhabditis tropicalis
#=GS A0A1I7TA56/92-255  DE Uncharacterized protein
#=GS A0A1I7TA56/92-255  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS A0A261CEI0/90-257  AC A0A261CEI0
#=GS A0A261CEI0/90-257  OS Caenorhabditis latens
#=GS A0A261CEI0/90-257  DE Uncharacterized protein
#=GS A0A261CEI0/90-257  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GF SQ 11
Q54XS9/159-314             ------------------------------------------NFITKFITTHKNACRCAKFSWDGKYVATGSSDTSIKLLDVNKMRNYN---QTKNETTEDSAPSRPVIRTFYDHTM----------------PINDLDFHPSAPILSSASKDGTIRFYDY-KSSLKRSFKYIQDTHGIRSINFHPCGDLILAGTDHQMIRLYNVNTFQSFTARKINE-
Q19864/90-256              ---------------------------------VQPVSSEPSEYETIYLTVHKAPCRAAAFNSDGSLVATGSADCSIKIMDVERILAREK--EHREMNENGPDAHHPVIRTLYDHVD----------------DVNTVIFHPRDSILISGSNDKTVKLFDFSKTAVKKAMKTLSEVYPVRALSCHPGGEFLLVATDHPTVRLYNIETAQAYASANPDD-
A7SVS3/85-254              --------------------------------DAHSTTPPAAIYETYYVTAHKAPCRAASFSPNGKLVATGSVDSSIKVLDVDRMVAKNTMPQVHDQGQGMNLENHPVIRTLYDHAE----------------EVTALEFHPCAPVLISGSKDCTVKLFDISKPSVKKAYKAVQEAEVINSMSFHPSGDFVLVSTEHPTIRLYDVNTFQCFVPSNPRE-
F0ZZM4/123-280             -----------------------------------------VSFLTKFITTHKNACRCAKFSWDGKYVATGSSDTSIKLLDVNKMRNYN---QTKNETTEDSAPSRPVIRTFYDHTQ----------------PINDLDFHPSAPILSSASKDGTIRFYDY-KSSLKRSFKYIQDSHSIRTINFHPCGDMILAGTDHNMIRLYNVNTFQSFTARKVNEH
H3FG25/13-179              ------------------------------DADVLPCSPEPCQYETIFLTAHKAPCRSAAFNNDGTLCATGSVDCSIKILDVERIIARE---NGGDISENGPDASNPIIRTLYDHVD----------------EVTSIVFHPREPILVSGSRDMTVKMFDYSKMAVKRAMKTIQEVSTISAMSFHPGGEFLLVATEHPTVRLYNVETLQCFVGSMP---
A0A2G5UYA5/57-256          QFVEDPDYKAEENTMPMPFETSSAGLDLQYDADVVATSPEPSQYETIYLTVHKAPCRAAAFNSDGSLVATGSADCSIKIMDVERILAREK--EHREMNENGPDAHHPVIRTLYDHVD----------------DVNTVIFHPRDAILISGSNDKTVKLFDFSKTAVKRAMKTLSEVYPVRALSCHPGGEFLLVATDHPTVRLYNIETAQAYASANPDD-
A8WNM2/69-271              ------------NTMPMQFETSSAGLDLQYDADVAATSPEPSQYETIYLTVHKAPCRAAAFNSDGSLIATGSADCSIKIMDVERILAREK--EHREMNENGPDAHHPVIRTLYDHVDVRRDFGRFSDKILDFQDVNTVIFHPRDAILISGSNDKTVKLFDFSKTAVKRAMKTLSEVYPVRALSCHPGGEFLLVATDHPTVRLYNIETAQAYASANPD--
E3LGD2/90-257              ---------------------------------VQPVSPEPSQYETIYLTVHKAPCRAAAFNSDGSLVATGSADCSIKIMDVERILAREK--EHREMNENGPDAHHPVIRTLYDHVD----------------DVNTVLFHPRDAILISGSNDKTVKLFDFSKTAVKRAMKTLSEVYPVRALSCHPGGEFLLVATDHPTVRLYNIETAQAYASANPDDQ
G0PES4/92-253              ------------------------------------VSPEPSQYETIYLTVHKQPCRASAFNSDGSLVATGSADCSIKIMDVERILAREK--EHREMNENGPDAHHPVIRTLYDHVD----------------DVNTVIFHPRDAILISGSNDKTVKLFDFSKTAVKRAMKTLAEVYPVRALSCHPGGEFLLVGTDHSTLRLYNIETAQAYTSANP---
A0A1I7TA56/92-255          -----------------------------------PVSPEPSQYETIYLTVHKAACRAAAFNSDGSLVATGSADCSIKIMDVERILAREK--EHREMNENGPDAHHPVIRTLYDHVD----------------DVNTVIFHPRDAILISGSNDKTVKLFDFSKTAVKRAMKTLSEVYPVRALSCHPGGEFLLVATDHPTVRLYNIETAQAYASANPD--
A0A261CEI0/90-257          ---------------------------------VQPVSPEPSQYETIYLTVHKAPCRAAAFNSDGSLVATGSADCSIKIMDVERILAREK--EHREMNENGPDAHHPVIRTLYDHVD----------------DVNTVLFHPRDAILISGSNDKTVKLFDFSKTAVKRAMKTLSEVYPVRALSCHPGGEFLLVATDHPTVRLYNIETAQAYASANPDDQ
#=GC scorecons             000000000000000000000000000000001212234333475947695995699585963794669999595999669967646562005455455555454698999699955000000000000000047646399955589596959497767964956697659454755476556599597669659795669997769495755455320
#=GC scorecons_70          ___________________________________________*_*_*_*_**_***_*_*__**__*****_*_*******_**_*___________________*********___________________**___***___**_***_*_***_**__*__****_*___*___**__*_**_***_**_***_*******_*_*_*________
#=GC scorecons_80          ___________________________________________*_*_*_*_**__**_*_*__**___****_*_***__**_*______________________*****_***___________________*____***___**_*_*_*_***_**__*___**__*___*_________**_*___*__***___****__*_*_*________
#=GC scorecons_90          _____________________________________________*___*_**__**_*_*___*___****_*_***__**________________________*****_***________________________***___**_*_*_*_*____*__*___*___*_____________**_*___*__*_*___***___*_*__________
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